emacs-orgmode@gnu.org archives
 help / color / mirror / code / Atom feed
From: Eric Schulte <schulte.eric@gmail.com>
To: Andreas Kiermeier <andreas.kiermeier@gmail.com>
Cc: Emacs-orgmode@gnu.org
Subject: Re: R code block produces only partial output
Date: Mon, 04 Aug 2014 09:10:40 -0400	[thread overview]
Message-ID: <877g2oz9gv.fsf@gmail.com> (raw)
In-Reply-To: <CAN7vk5Sffo30qyJDA5Jg2qu-AR9pUwHmuah1+JfyzCXmdfVnaQ@mail.gmail.com> (Andreas Kiermeier's message of "Mon, 4 Aug 2014 21:53:31 +0930")

[-- Attachment #1: Type: text/plain, Size: 734 bytes --]

Andreas Kiermeier <andreas.kiermeier@gmail.com> writes:

> On 4 August 2014 21:23, Eric Schulte <schulte.eric@gmail.com> wrote:
>> Why are you setting the output type to "graphics" when you are trying to
>> return text?  I think that may be the source of your problem.
>
> Hi Eric,
> thanks for the quick response.
> I've had 'graphics' from my main data analysis file ... I think I got
> that from WORG.
> I've removed it, reloaded the file, but same outcome.
> Any other thoughts?
> Cheers,
> Andreas

Hi Andreas,

I can't reproduce your problem.  I get the following from your minimal
example when run in an Org-mode file, and from the command line.  They
are identical.  Are you using the latest version of Org-mode?

Best,
Eric


[-- Warning: decoded text below may be mangled, UTF-8 assumed --]
[-- Attachment #2: r-example.org --]
[-- Type: text/x-org, Size: 452 bytes --]

#+BEGIN_SRC R :results output
  x <- rnorm(100)
  y <- quantile(x, probs=seq(0,1,0.1))
  names(y) <- as.character(c("0",".1",".2",".3",".4",".5",".6",".7",".8",".9","1"))
  y
#+END_SRC

#+RESULTS:
:          0         .1         .2         .3         .4         .5         .6 
: -2.5388527 -1.7039145 -1.0586655 -0.4892375 -0.2083433  0.0669765  0.2674644 
:         .7         .8         .9          1 
:  0.6065544  1.0985117  1.5376634  3.2423323 


[-- Attachment #3: r-example-command-line.txt --]
[-- Type: text/plain, Size: 1151 bytes --]

$ R

R version 3.1.0 (2014-04-10) -- "Spring Dance"
Copyright (C) 2014 The R Foundation for Statistical Computing
Platform: x86_64-unknown-linux-gnu (64-bit)

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

  Natural language support but running in an English locale

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

[Previously saved workspace restored]

> x <- rnorm(100)
> y <- quantile(x, probs=seq(0,1,0.1))
> names(y) <- as.character(c("0",".1",".2",".3",".4",".5",".6",".7",".8",".9","1"))
> y
          0          .1          .2          .3          .4          .5 
-2.53624773 -1.30846042 -0.70659822 -0.43565010 -0.24318346 -0.01034625 
         .6          .7          .8          .9           1 
 0.24125644  0.49945059  0.92032314  1.36423669  2.83357915 
>

[-- Attachment #4: Type: text/plain, Size: 90 bytes --]


-- 
Eric Schulte
https://cs.unm.edu/~eschulte
PGP: 0x614CA05D (see https://u.fsf.org/yw)

  reply	other threads:[~2014-08-04 13:11 UTC|newest]

Thread overview: 41+ messages / expand[flat|nested]  mbox.gz  Atom feed  top
2014-08-04 11:18 R code block produces only partial output Andreas Kiermeier
2014-08-04 11:53 ` Eric Schulte
2014-08-04 12:23   ` Andreas Kiermeier
2014-08-04 13:10     ` Eric Schulte [this message]
2014-08-05  0:46       ` Andreas Kiermeier
2014-08-05  4:00         ` John Hendy
2014-08-05  4:31           ` Andreas Kiermeier
2014-08-05 18:05       ` Charles Berry
2014-08-05 19:02         ` Eric Schulte
2014-08-05 19:11           ` John Hendy
2014-08-05 19:57             ` Nick Dokos
2014-08-05 20:10               ` Nick Dokos
2014-08-05 22:21             ` Charles C. Berry
2014-08-06  3:32           ` Aaron Ecay
2014-08-06 11:30             ` Eric Schulte
2014-08-07  6:00               ` Aaron Ecay
2014-08-07 17:42                 ` Charles C. Berry
2014-08-07 18:06                   ` Aaron Ecay
2014-08-07 18:42                     ` Charles C. Berry
2014-08-07 19:06                       ` Thomas S. Dye
2014-08-09  8:54                       ` Rainer M Krug
2014-08-16  5:05                     ` Aaron Ecay
2014-08-16 18:50                       ` Charles C. Berry
2014-08-16 20:58                         ` Aaron Ecay
2014-08-17  6:03                           ` Achim Gratz
2014-08-19  0:13                             ` Aaron Ecay
2014-08-19  5:36                               ` Achim Gratz
2014-08-23  8:32                                 ` Aaron Ecay
2014-08-23  9:24                                   ` Andreas Kiermeier
2014-08-23 17:10                                   ` Aaron Ecay
2014-08-23 18:35                                   ` Thomas S. Dye
2014-08-23 19:37                                     ` Ista Zahn
2014-08-24  0:10                           ` Charles C. Berry
2014-08-28  5:24                             ` Aaron Ecay
2014-09-01  5:00                               ` Aaron Ecay
2014-09-01 16:08                                 ` Charles C. Berry
2014-08-09  8:48                   ` Rainer M Krug
2014-08-06  1:11         ` Andreas Kiermeier
2014-08-06  2:21           ` Charles C. Berry
2014-08-06  3:24             ` Aaron Ecay
2014-08-06 15:59               ` Charles C. Berry

Reply instructions:

You may reply publicly to this message via plain-text email
using any one of the following methods:

* Save the following mbox file, import it into your mail client,
  and reply-to-all from there: mbox

  Avoid top-posting and favor interleaved quoting:
  https://en.wikipedia.org/wiki/Posting_style#Interleaved_style

  List information: https://www.orgmode.org/

* Reply using the --to, --cc, and --in-reply-to
  switches of git-send-email(1):

  git send-email \
    --in-reply-to=877g2oz9gv.fsf@gmail.com \
    --to=schulte.eric@gmail.com \
    --cc=Emacs-orgmode@gnu.org \
    --cc=andreas.kiermeier@gmail.com \
    /path/to/YOUR_REPLY

  https://kernel.org/pub/software/scm/git/docs/git-send-email.html

* If your mail client supports setting the In-Reply-To header
  via mailto: links, try the mailto: link
Be sure your reply has a Subject: header at the top and a blank line before the message body.
Code repositories for project(s) associated with this public inbox

	https://git.savannah.gnu.org/cgit/emacs/org-mode.git

This is a public inbox, see mirroring instructions
for how to clone and mirror all data and code used for this inbox;
as well as URLs for read-only IMAP folder(s) and NNTP newsgroup(s).