* ob-clojure evaluate error when Org-mode buffer has ns clojure code
@ 2017-06-16 15:36 numbchild
2017-06-17 1:46 ` Tim Cross
0 siblings, 1 reply; 9+ messages in thread
From: numbchild @ 2017-06-16 15:36 UTC (permalink / raw)
To: Org-mode
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When Org-mode buffer like this:
#+BEGIN_SRC clojure
(ns my.kk
(:require '[incanter.core :as kk]))
#+END_SRC
#+BEGIN_SRC clojure
(print "hi")
(def kkkk "hello")
#+END_SRC
#+RESULTS:
When I have `(ns ..)` namespace clojure code in buffer, the second `(print
..)` clojure result nothing. But when I remove the first src block, the
`(print ..)` clojure src block works fine.
I'm using Org-mode version from `master` with `use-package` like this:
(use-package org
:load-path "~/Code/Emacs/org-mode/lisp/"
:pin manual
:mode (("\\.org$" . org-mode))
:config
(use-package org-plus-contrib
:load-path "~/Code/Emacs/org-mode/contrib/lisp/"
:pin manual)
)
[stardiviner] <Hack this world!> GPG key ID: 47C32433
IRC(freeenode): stardiviner Twitter: @numbchild
Key fingerprint = 9BAA 92BC CDDD B9EF 3B36 CB99 B8C4 B8E5 47C3 2433
Blog: http://stardiviner.github.io/
[-- Attachment #2: Type: text/html, Size: 2954 bytes --]
^ permalink raw reply [flat|nested] 9+ messages in thread* Re: ob-clojure evaluate error when Org-mode buffer has ns clojure code 2017-06-16 15:36 ob-clojure evaluate error when Org-mode buffer has ns clojure code numbchild @ 2017-06-17 1:46 ` Tim Cross 2017-06-17 12:57 ` numbchild 0 siblings, 1 reply; 9+ messages in thread From: Tim Cross @ 2017-06-17 1:46 UTC (permalink / raw) To: numbchild@gmail.com; +Cc: Org-mode My guess is that cider is not finding the incanter package in the classpath when the first block attempts to evaluate. Another issue is that your not using any session options, so your two blocks will be evaluated in separate environments - not a real problem with your current example, but will be an issue if you expect to access incanter functions from separate babel blocks. There are a number of working parts which all need to be lined up correctly before babel clojure support will work correctly. Getting things to work when your just using core clojure functions is fairly trivial, but getting it to work when you have to pull in other dependencies can be a little tricky. You might find this article useful to get started http://fgiasson.com/blog/index.php/2016/06/21/optimal-emacs-settings-for-org-mode-for-literate-programming/ I also notice you have not set the org-babel-clojure-backend, which you need to do. My recommendation would be to do the following 1. Create a leinegen project to experiment with i.e. lein new app my-kk 2. Make sure you can edit and evaluate clojure just using clojure-mode and cider in emacs 3. Add the incanter package to your project.clj dependencies key 4. Modify core.clj (using clojure-mode) to include the code in your clojure blocks and run with cider to make sure they work as expected. 5. Create the org file you want to experiment with in the root of your project. This should ensure that when you try to evaluate clojure blocks, the cider backend will be loaded with the dependencies in the project.clj file. 6. Copy the code in your core.clj file into ONE babel src block and see if you can get it to evaluate correctly. Experiment with the block configuration options like :output etc. 7. Break the code up into different blocks and experiment with block options, especially session options. Once you get to that point, you should be across the various moving parts with sufficient understanding to then look at how you can tweak things to get exactly the behaviour and workflow you want. HTH Tim numbchild@gmail.com writes: > When Org-mode buffer like this: > > #+BEGIN_SRC clojure > (ns my.kk > (:require '[incanter.core :as kk])) > #+END_SRC > > #+BEGIN_SRC clojure > (print "hi") > (def kkkk "hello") > #+END_SRC > > #+RESULTS: > > When I have `(ns ..)` namespace clojure code in buffer, the second `(print > ..)` clojure result nothing. But when I remove the first src block, the > `(print ..)` clojure src block works fine. > > I'm using Org-mode version from `master` with `use-package` like this: > > (use-package org > :load-path "~/Code/Emacs/org-mode/lisp/" > :pin manual > :mode (("\\.org$" . org-mode)) > :config > (use-package org-plus-contrib > :load-path "~/Code/Emacs/org-mode/contrib/lisp/" > :pin manual) > ) > > > [stardiviner] <Hack this world!> GPG key ID: 47C32433 > IRC(freeenode): stardiviner Twitter: @numbchild > Key fingerprint = 9BAA 92BC CDDD B9EF 3B36 CB99 B8C4 B8E5 47C3 2433 > Blog: http://stardiviner.github.io/ -- Tim Cross ^ permalink raw reply [flat|nested] 9+ messages in thread
* Re: ob-clojure evaluate error when Org-mode buffer has ns clojure code 2017-06-17 1:46 ` Tim Cross @ 2017-06-17 12:57 ` numbchild 2017-06-17 13:26 ` numbchild 2017-06-18 1:10 ` Tim Cross 0 siblings, 2 replies; 9+ messages in thread From: numbchild @ 2017-06-17 12:57 UTC (permalink / raw) To: Tim Cross; +Cc: Org-mode [-- Attachment #1: Type: text/plain, Size: 10478 bytes --] I did configure `ob-clojure` with the following settings: ```elisp (require 'ob-clojure) ;; use CIDER as the Clojure execution backend (setq org-babel-clojure-backend 'cider) ;; Useful keybindings when using Clojure from Org ;; (org-defkey org-mode-map (kbd "C-x C-e") 'cider-eval-last-sexp) ;; (org-defkey org-mode-map (kbd "C-c C-d") 'cider-doc) ;; No timeout when executing calls on Cider via nrepl ;; (setq org-babel-clojure-sync-nrepl-timeout nil) ;; let `ob-clojure' babel src blocks allow evaluation. (add-to-list 'org-babel-default-header-args:clojure '(:eval . "yes")) (add-to-list 'org-babel-default-header-args:clojure '(:results . "output")) ;; (add-to-list 'org-babel-default-header-args:clojure ;; '(:show-process . t)) ``` I start CIDER REPL session with `cider-jack-in` without project in Emacs. I changed namespace to `user` in src blocks like this: ```org #+BEGIN_SRC clojure (ns user (:require '[incanter.core :as kk])) #+END_SRC #+RESULTS: #+BEGIN_SRC clojure :session :results output (print "hi") (def kkkk "hello") #+END_SRC #+RESULTS: : hi ``` Then it works. Seems you're right, might my first src block can't work correctly. That caused second src block evaluation failed. But I require `incanter` works, I have `incanter` in Leiningen dependencies. ```clojure (require '[incanter.core :as kk]) ``` But include `incanter` in namespace failed: ```clojure (ns user (:require '[incanter.core :as kk])) ``` with the following error. ``` Show: Clojure Java REPL Tooling Duplicates All (29 frames hidden) 2. Unhandled clojure.lang.Compiler$CompilerException Error compiling Code/learning/Emacs/Org-mode/ob-clojure.org at (1:1) core.clj: 5771 clojure.core/throw-if core.clj: 5835 clojure.core/load-lib core.clj: 5832 clojure.core/load-lib RestFn.java: 142 clojure.lang.RestFn/applyTo core.clj: 659 clojure.core/apply core.clj: 5893 clojure.core/load-libs core.clj: 5873 clojure.core/load-libs RestFn.java: 137 clojure.lang.RestFn/applyTo core.clj: 659 clojure.core/apply core.clj: 5911 clojure.core/require core.clj: 5911 clojure.core/require RestFn.java: 408 clojure.lang.RestFn/invoke REPL: 1 user/eval46259/loading--auto-- REPL: 1 user/eval46259 REPL: 1 user/eval46259 Compiler.java: 6977 clojure.lang.Compiler/eval Compiler.java: 6966 clojure.lang.Compiler/eval Compiler.java: 6940 clojure.lang.Compiler/eval core.clj: 3187 clojure.core/eval core.clj: 3183 clojure.core/eval main.clj: 242 clojure.main/repl/read-eval-print/fn main.clj: 242 clojure.main/repl/read-eval-print main.clj: 260 clojure.main/repl/fn main.clj: 260 clojure.main/repl main.clj: 176 clojure.main/repl RestFn.java: 1523 clojure.lang.RestFn/invoke interruptible_eval.clj: 87 clojure.tools.nrepl.middleware.interruptible-eval/evaluate/fn AFn.java: 152 clojure.lang.AFn/applyToHelper AFn.java: 144 clojure.lang.AFn/applyTo core.clj: 657 clojure.core/apply core.clj: 1963 clojure.core/with-bindings* core.clj: 1963 clojure.core/with-bindings* RestFn.java: 425 clojure.lang.RestFn/invoke interruptible_eval.clj: 85 clojure.tools.nrepl.middleware.interruptible-eval/evaluate interruptible_eval.clj: 55 clojure.tools.nrepl.middleware.interruptible-eval/evaluate interruptible_eval.clj: 222 clojure.tools.nrepl.middleware.interruptible-eval/interruptible-eval/fn/fn interruptible_eval.clj: 190 clojure.tools.nrepl.middleware.interruptible-eval/run-next/fn AFn.java: 22 clojure.lang.AFn/run ThreadPoolExecutor.java: 1142 java.util.concurrent.ThreadPoolExecutor/runWorker ThreadPoolExecutor.java: 617 java.util.concurrent.ThreadPoolExecutor$Worker/run Thread.java: 745 java.lang.Thread/run 1. Caused by java.lang.Exception Found lib name 'incanter.stats' containing period with prefix 'quote'. lib names inside prefix lists must not contain periods core.clj: 659 clojure.core/apply core.clj: 5893 clojure.core/load-libs core.clj: 5873 clojure.core/load-libs RestFn.java: 137 clojure.lang.RestFn/applyTo core.clj: 659 clojure.core/apply core.clj: 5911 clojure.core/require core.clj: 5911 clojure.core/require RestFn.java: 408 clojure.lang.RestFn/invoke REPL: 1 user/eval46259/loading--auto-- REPL: 1 user/eval46259 REPL: 1 user/eval46259 Compiler.java: 6977 clojure.lang.Compiler/eval Compiler.java: 6966 clojure.lang.Compiler/eval Compiler.java: 6940 clojure.lang.Compiler/eval core.clj: 3187 clojure.core/eval core.clj: 3183 clojure.core/eval main.clj: 242 clojure.main/repl/read-eval-print/fn main.clj: 242 clojure.main/repl/read-eval-print main.clj: 260 clojure.main/repl/fn main.clj: 260 clojure.main/repl main.clj: 176 clojure.main/repl RestFn.java: 1523 clojure.lang.RestFn/invoke interruptible_eval.clj: 87 clojure.tools.nrepl.middleware.interruptible-eval/evaluate/fn AFn.java: 152 clojure.lang.AFn/applyToHelper AFn.java: 144 clojure.lang.AFn/applyTo core.clj: 657 clojure.core/apply core.clj: 1963 clojure.core/with-bindings* core.clj: 1963 clojure.core/with-bindings* RestFn.java: 425 clojure.lang.RestFn/invoke interruptible_eval.clj: 85 clojure.tools.nrepl.middleware.interruptible-eval/evaluate interruptible_eval.clj: 55 clojure.tools.nrepl.middleware.interruptible-eval/evaluate interruptible_eval.clj: 222 clojure.tools.nrepl.middleware.interruptible-eval/interruptible-eval/fn/fn interruptible_eval.clj: 190 clojure.tools.nrepl.middleware.interruptible-eval/run-next/fn AFn.java: 22 clojure.lang.AFn/run ThreadPoolExecutor.java: 1142 java.util.concurrent.ThreadPoolExecutor/runWorker ThreadPoolExecutor.java: 617 java.util.concurrent.ThreadPoolExecutor$Worker/run Thread.java: 745 java.lang.Thread/run ``` [stardiviner] <Hack this world!> GPG key ID: 47C32433 IRC(freeenode): stardiviner Twitter: @numbchild Key fingerprint = 9BAA 92BC CDDD B9EF 3B36 CB99 B8C4 B8E5 47C3 2433 Blog: http://stardiviner.github.io/ On Sat, Jun 17, 2017 at 9:46 AM, Tim Cross <theophilusx@gmail.com> wrote: > > My guess is that cider is not finding the incanter package in the > classpath when the first block attempts to evaluate. Another issue is > that your not using any session options, so your two blocks will be > evaluated in separate environments - not a real problem with your > current example, but will be an issue if you expect to access incanter > functions from separate babel blocks. > > There are a number of working parts which all need to be lined up > correctly before babel clojure support will work correctly. Getting > things to work when your just using core clojure functions is fairly > trivial, but getting it to work when you have to pull in other > dependencies can be a little tricky. > > You might find this article useful to get started > > http://fgiasson.com/blog/index.php/2016/06/21/optimal- > emacs-settings-for-org-mode-for-literate-programming/ > > I also notice you have not set the org-babel-clojure-backend, which you > need to do. My recommendation would be to do the following > > 1. Create a leinegen project to experiment with i.e. > lein new app my-kk > > 2. Make sure you can edit and evaluate clojure just using clojure-mode > and cider in emacs > > 3. Add the incanter package to your project.clj dependencies key > > 4. Modify core.clj (using clojure-mode) to include the code in your > clojure blocks and run with cider to make sure they work as expected. > > 5. Create the org file you want to experiment with in the root of your > project. This should ensure that when you try to evaluate clojure > blocks, the cider backend will be loaded with the dependencies in the > project.clj file. > > 6. Copy the code in your core.clj file into ONE babel src block and see > if you can get it to evaluate correctly. Experiment with the block > configuration options like :output etc. > > 7. Break the code up into different blocks and experiment with block > options, especially session options. > > Once you get to that point, you should be across the various moving > parts with sufficient understanding to then look at how you can tweak > things to get exactly the behaviour and workflow you want. > > HTH > > Tim > > numbchild@gmail.com writes: > > > When Org-mode buffer like this: > > > > #+BEGIN_SRC clojure > > (ns my.kk > > (:require '[incanter.core :as kk])) > > #+END_SRC > > > > #+BEGIN_SRC clojure > > (print "hi") > > (def kkkk "hello") > > #+END_SRC > > > > #+RESULTS: > > > > When I have `(ns ..)` namespace clojure code in buffer, the second > `(print > > ..)` clojure result nothing. But when I remove the first src block, the > > `(print ..)` clojure src block works fine. > > > > I'm using Org-mode version from `master` with `use-package` like this: > > > > (use-package org > > :load-path "~/Code/Emacs/org-mode/lisp/" > > :pin manual > > :mode (("\\.org$" . org-mode)) > > :config > > (use-package org-plus-contrib > > :load-path "~/Code/Emacs/org-mode/contrib/lisp/" > > :pin manual) > > ) > > > > > > [stardiviner] <Hack this world!> GPG key ID: 47C32433 > > IRC(freeenode): stardiviner Twitter: @numbchild > > Key fingerprint = 9BAA 92BC CDDD B9EF 3B36 CB99 B8C4 B8E5 47C3 2433 > > Blog: http://stardiviner.github.io/ > > > -- > Tim Cross > [-- Attachment #2: Type: text/html, Size: 22129 bytes --] ^ permalink raw reply [flat|nested] 9+ messages in thread
* Re: ob-clojure evaluate error when Org-mode buffer has ns clojure code 2017-06-17 12:57 ` numbchild @ 2017-06-17 13:26 ` numbchild 2017-06-18 1:10 ` Tim Cross 1 sibling, 0 replies; 9+ messages in thread From: numbchild @ 2017-06-17 13:26 UTC (permalink / raw) To: Tim Cross; +Cc: Org-mode [-- Attachment #1: Type: text/plain, Size: 12610 bytes --] After a new evaluation. I found ```org #+BEGIN_SRC clojure (ns user (:require '[incanter.core :as mm])) #+END_SRC #+RESULTS: : class clojure.lang.Compiler$CompilerExceptionclass clojure.lang.Compiler$CompilerExceptionCompilerException java.lang.Exception: Found lib name 'incanter.core' containing period with prefix 'quote'. lib names inside prefix lists must not contain periods, compiling:(/home/stardiviner/Code/learning/Emacs/Org-mode/ob-clojure.org:1 :1) #+BEGIN_SRC clojure :session :results output (print "hi") (def kkkk "hello") #+END_SRC #+RESULTS: : hi ``` Both two src blocks works. Because the first src block Clojure namespace `(ns user ..)` is same with CIDER REPL default namespace `user`. So it works. But when I tried add header argument `:eval no` on first src block like this: ```org #+BEGIN_SRC clojure :session :eval no (ns user.kk (:require '[incanter.core :as mm])) #+END_SRC #+RESULTS: #+BEGIN_SRC clojure :session :results output (print "hi") (def kkkk "hello") #+END_SRC #+RESULTS: ``` The second src block failed again. So I think `ob-clojure` will try to evaluate the first src block even I added header argument `:eval no`. So `ob-clojure.el` does not respect header argument `:eval no`. But I think might because `:eval no` is not work for this purpose. I did can't evaluate by pressing `[C-c C-c]` on first block. [stardiviner] <Hack this world!> GPG key ID: 47C32433 IRC(freeenode): stardiviner Twitter: @numbchild Key fingerprint = 9BAA 92BC CDDD B9EF 3B36 CB99 B8C4 B8E5 47C3 2433 Blog: http://stardiviner.github.io/ On Sat, Jun 17, 2017 at 8:57 PM, numbchild@gmail.com <numbchild@gmail.com> wrote: > I did configure `ob-clojure` with the following settings: > > ```elisp > (require 'ob-clojure) > > ;; use CIDER as the Clojure execution backend > (setq org-babel-clojure-backend 'cider) > > ;; Useful keybindings when using Clojure from Org > ;; (org-defkey org-mode-map (kbd "C-x C-e") 'cider-eval-last-sexp) > ;; (org-defkey org-mode-map (kbd "C-c C-d") 'cider-doc) > > ;; No timeout when executing calls on Cider via nrepl > ;; (setq org-babel-clojure-sync-nrepl-timeout nil) > > ;; let `ob-clojure' babel src blocks allow evaluation. > (add-to-list 'org-babel-default-header-args:clojure > '(:eval . "yes")) > (add-to-list 'org-babel-default-header-args:clojure > '(:results . "output")) > ;; (add-to-list 'org-babel-default-header-args:clojure > ;; '(:show-process . t)) > ``` > > I start CIDER REPL session with `cider-jack-in` without project in Emacs. > > I changed namespace to `user` in src blocks like this: > > ```org > #+BEGIN_SRC clojure > (ns user > (:require '[incanter.core :as kk])) > #+END_SRC > > #+RESULTS: > > #+BEGIN_SRC clojure :session :results output > (print "hi") > (def kkkk "hello") > #+END_SRC > > #+RESULTS: > : hi > ``` > > Then it works. > > Seems you're right, might my first src block can't work correctly. That > caused second src block evaluation failed. > > But I require `incanter` works, I have `incanter` in Leiningen > dependencies. > ```clojure > (require '[incanter.core :as kk]) > ``` > > But include `incanter` in namespace failed: > ```clojure > (ns user > (:require '[incanter.core :as kk])) > ``` > with the following error. > ``` > Show: Clojure Java REPL Tooling Duplicates All (29 frames hidden) > > 2. Unhandled clojure.lang.Compiler$CompilerException > Error compiling Code/learning/Emacs/Org-mode/ob-clojure.org at (1:1) > > core.clj: 5771 clojure.core/throw-if > core.clj: 5835 clojure.core/load-lib > core.clj: 5832 clojure.core/load-lib > RestFn.java: 142 clojure.lang.RestFn/applyTo > core.clj: 659 clojure.core/apply > core.clj: 5893 clojure.core/load-libs > core.clj: 5873 clojure.core/load-libs > RestFn.java: 137 clojure.lang.RestFn/applyTo > core.clj: 659 clojure.core/apply > core.clj: 5911 clojure.core/require > core.clj: 5911 clojure.core/require > RestFn.java: 408 clojure.lang.RestFn/invoke > REPL: 1 user/eval46259/loading--auto-- > REPL: 1 user/eval46259 > REPL: 1 user/eval46259 > Compiler.java: 6977 clojure.lang.Compiler/eval > Compiler.java: 6966 clojure.lang.Compiler/eval > Compiler.java: 6940 clojure.lang.Compiler/eval > core.clj: 3187 clojure.core/eval > core.clj: 3183 clojure.core/eval > main.clj: 242 clojure.main/repl/read-eval-print/fn > main.clj: 242 clojure.main/repl/read-eval-print > main.clj: 260 clojure.main/repl/fn > main.clj: 260 clojure.main/repl > main.clj: 176 clojure.main/repl > RestFn.java: 1523 clojure.lang.RestFn/invoke > interruptible_eval.clj: 87 clojure.tools.nrepl. > middleware.interruptible-eval/evaluate/fn > AFn.java: 152 clojure.lang.AFn/applyToHelper > AFn.java: 144 clojure.lang.AFn/applyTo > core.clj: 657 clojure.core/apply > core.clj: 1963 clojure.core/with-bindings* > core.clj: 1963 clojure.core/with-bindings* > RestFn.java: 425 clojure.lang.RestFn/invoke > interruptible_eval.clj: 85 clojure.tools.nrepl. > middleware.interruptible-eval/evaluate > interruptible_eval.clj: 55 clojure.tools.nrepl. > middleware.interruptible-eval/evaluate > interruptible_eval.clj: 222 clojure.tools.nrepl. > middleware.interruptible-eval/interruptible-eval/fn/fn > interruptible_eval.clj: 190 clojure.tools.nrepl. > middleware.interruptible-eval/run-next/fn > AFn.java: 22 clojure.lang.AFn/run > ThreadPoolExecutor.java: 1142 java.util.concurrent. > ThreadPoolExecutor/runWorker > ThreadPoolExecutor.java: 617 java.util.concurrent. > ThreadPoolExecutor$Worker/run > Thread.java: 745 java.lang.Thread/run > > 1. Caused by java.lang.Exception > Found lib name 'incanter.stats' containing period with prefix 'quote'. > lib > names inside prefix lists must not contain periods > > core.clj: 659 clojure.core/apply > core.clj: 5893 clojure.core/load-libs > core.clj: 5873 clojure.core/load-libs > RestFn.java: 137 clojure.lang.RestFn/applyTo > core.clj: 659 clojure.core/apply > core.clj: 5911 clojure.core/require > core.clj: 5911 clojure.core/require > RestFn.java: 408 clojure.lang.RestFn/invoke > REPL: 1 user/eval46259/loading--auto-- > REPL: 1 user/eval46259 > REPL: 1 user/eval46259 > Compiler.java: 6977 clojure.lang.Compiler/eval > Compiler.java: 6966 clojure.lang.Compiler/eval > Compiler.java: 6940 clojure.lang.Compiler/eval > core.clj: 3187 clojure.core/eval > core.clj: 3183 clojure.core/eval > main.clj: 242 clojure.main/repl/read-eval-print/fn > main.clj: 242 clojure.main/repl/read-eval-print > main.clj: 260 clojure.main/repl/fn > main.clj: 260 clojure.main/repl > main.clj: 176 clojure.main/repl > RestFn.java: 1523 clojure.lang.RestFn/invoke > interruptible_eval.clj: 87 clojure.tools.nrepl. > middleware.interruptible-eval/evaluate/fn > AFn.java: 152 clojure.lang.AFn/applyToHelper > AFn.java: 144 clojure.lang.AFn/applyTo > core.clj: 657 clojure.core/apply > core.clj: 1963 clojure.core/with-bindings* > core.clj: 1963 clojure.core/with-bindings* > RestFn.java: 425 clojure.lang.RestFn/invoke > interruptible_eval.clj: 85 clojure.tools.nrepl. > middleware.interruptible-eval/evaluate > interruptible_eval.clj: 55 clojure.tools.nrepl. > middleware.interruptible-eval/evaluate > interruptible_eval.clj: 222 clojure.tools.nrepl. > middleware.interruptible-eval/interruptible-eval/fn/fn > interruptible_eval.clj: 190 clojure.tools.nrepl. > middleware.interruptible-eval/run-next/fn > AFn.java: 22 clojure.lang.AFn/run > ThreadPoolExecutor.java: 1142 java.util.concurrent. > ThreadPoolExecutor/runWorker > ThreadPoolExecutor.java: 617 java.util.concurrent. > ThreadPoolExecutor$Worker/run > Thread.java: 745 java.lang.Thread/run > ``` > > > [stardiviner] <Hack this world!> GPG key ID: 47C32433 > IRC(freeenode): stardiviner Twitter: @numbchild > Key fingerprint = 9BAA 92BC CDDD B9EF 3B36 CB99 B8C4 B8E5 47C3 2433 > Blog: http://stardiviner.github.io/ > > On Sat, Jun 17, 2017 at 9:46 AM, Tim Cross <theophilusx@gmail.com> wrote: > >> >> My guess is that cider is not finding the incanter package in the >> classpath when the first block attempts to evaluate. Another issue is >> that your not using any session options, so your two blocks will be >> evaluated in separate environments - not a real problem with your >> current example, but will be an issue if you expect to access incanter >> functions from separate babel blocks. >> >> There are a number of working parts which all need to be lined up >> correctly before babel clojure support will work correctly. Getting >> things to work when your just using core clojure functions is fairly >> trivial, but getting it to work when you have to pull in other >> dependencies can be a little tricky. >> >> You might find this article useful to get started >> >> http://fgiasson.com/blog/index.php/2016/06/21/optimal-emacs- >> settings-for-org-mode-for-literate-programming/ >> >> I also notice you have not set the org-babel-clojure-backend, which you >> need to do. My recommendation would be to do the following >> >> 1. Create a leinegen project to experiment with i.e. >> lein new app my-kk >> >> 2. Make sure you can edit and evaluate clojure just using clojure-mode >> and cider in emacs >> >> 3. Add the incanter package to your project.clj dependencies key >> >> 4. Modify core.clj (using clojure-mode) to include the code in your >> clojure blocks and run with cider to make sure they work as expected. >> >> 5. Create the org file you want to experiment with in the root of your >> project. This should ensure that when you try to evaluate clojure >> blocks, the cider backend will be loaded with the dependencies in the >> project.clj file. >> >> 6. Copy the code in your core.clj file into ONE babel src block and see >> if you can get it to evaluate correctly. Experiment with the block >> configuration options like :output etc. >> >> 7. Break the code up into different blocks and experiment with block >> options, especially session options. >> >> Once you get to that point, you should be across the various moving >> parts with sufficient understanding to then look at how you can tweak >> things to get exactly the behaviour and workflow you want. >> >> HTH >> >> Tim >> >> numbchild@gmail.com writes: >> >> > When Org-mode buffer like this: >> > >> > #+BEGIN_SRC clojure >> > (ns my.kk >> > (:require '[incanter.core :as kk])) >> > #+END_SRC >> > >> > #+BEGIN_SRC clojure >> > (print "hi") >> > (def kkkk "hello") >> > #+END_SRC >> > >> > #+RESULTS: >> > >> > When I have `(ns ..)` namespace clojure code in buffer, the second >> `(print >> > ..)` clojure result nothing. But when I remove the first src block, the >> > `(print ..)` clojure src block works fine. >> > >> > I'm using Org-mode version from `master` with `use-package` like this: >> > >> > (use-package org >> > :load-path "~/Code/Emacs/org-mode/lisp/" >> > :pin manual >> > :mode (("\\.org$" . org-mode)) >> > :config >> > (use-package org-plus-contrib >> > :load-path "~/Code/Emacs/org-mode/contrib/lisp/" >> > :pin manual) >> > ) >> > >> > >> > [stardiviner] <Hack this world!> GPG key ID: 47C32433 >> > IRC(freeenode): stardiviner Twitter: @numbchild >> > Key fingerprint = 9BAA 92BC CDDD B9EF 3B36 CB99 B8C4 B8E5 47C3 2433 >> > Blog: http://stardiviner.github.io/ >> >> >> -- >> Tim Cross >> > > [-- Attachment #2: Type: text/html, Size: 27706 bytes --] ^ permalink raw reply [flat|nested] 9+ messages in thread
* Re: ob-clojure evaluate error when Org-mode buffer has ns clojure code 2017-06-17 12:57 ` numbchild 2017-06-17 13:26 ` numbchild @ 2017-06-18 1:10 ` Tim Cross 2017-06-18 5:48 ` numbchild 1 sibling, 1 reply; 9+ messages in thread From: Tim Cross @ 2017-06-18 1:10 UTC (permalink / raw) To: numbchild@gmail.com; +Cc: Org-mode It looks like you have a combination of both clojure errors and possibly org babel errors. You need to sort out the clojure errors before you can verify there are any problems with org babel clojure support. You mention that > I start CIDER REPL session with `cider-jack-in` without project in > Emacs. but then you say > But I require `incanter` works, I have `incanter` in Leiningen > dependencies. However, if you don't have a project, then you don't have a project.clj file and if you don't have a project.clj file, you don't have a :dependencies block with incanter as a specified dependency, so incanter is not in your classpath and therefore will not be found when you try to require it. Note also that you have incorrect syntax for your require statement. Also to be clear, (ns ... (:require ...)) does not define dependencies. It simply loads the library into the namespace. The correct syntax for your first block is (ns my-kk (:require [incanter.core :as k])) There is no quote before the lib spec - this is also what the error message is telling you. If you call require as a function, then you do need to use the quote i.e. (require 'incanter.core :as k) You appear to have two main problems here and that is making things 'muddy'. I'm guessing your learning clojure as well as using org babel clojure support. You need to sort out the clojure problems first. Highly recommend you suspend using org mode to do your clojure until your across all the clojure specifics and have a good understanding of the clojure environment. You will need a good understanding of how clojure works to then be able to work out what you need to do to get it to work with org mode. Trying to do both at the same time will just cause confusion. HTH Tim numbchild@gmail.com writes: > I did configure `ob-clojure` with the following settings: > > ```elisp > (require 'ob-clojure) > > ;; use CIDER as the Clojure execution backend > (setq org-babel-clojure-backend 'cider) > > ;; Useful keybindings when using Clojure from Org > ;; (org-defkey org-mode-map (kbd "C-x C-e") 'cider-eval-last-sexp) > ;; (org-defkey org-mode-map (kbd "C-c C-d") 'cider-doc) > > ;; No timeout when executing calls on Cider via nrepl > ;; (setq org-babel-clojure-sync-nrepl-timeout nil) > > ;; let `ob-clojure' babel src blocks allow evaluation. > (add-to-list 'org-babel-default-header-args:clojure > '(:eval . "yes")) > (add-to-list 'org-babel-default-header-args:clojure > '(:results . "output")) > ;; (add-to-list 'org-babel-default-header-args:clojure > ;; '(:show-process . t)) > ``` > > I start CIDER REPL session with `cider-jack-in` without project in Emacs. > > I changed namespace to `user` in src blocks like this: > > ```org > #+BEGIN_SRC clojure > (ns user > (:require '[incanter.core :as kk])) > #+END_SRC > > #+RESULTS: > > #+BEGIN_SRC clojure :session :results output > (print "hi") > (def kkkk "hello") > #+END_SRC > > #+RESULTS: > : hi > ``` > > Then it works. > > Seems you're right, might my first src block can't work correctly. That > caused second src block evaluation failed. > > But I require `incanter` works, I have `incanter` in Leiningen dependencies. > ```clojure > (require '[incanter.core :as kk]) > ``` > > But include `incanter` in namespace failed: > ```clojure > (ns user > (:require '[incanter.core :as kk])) > ``` > with the following error. > ``` > Show: Clojure Java REPL Tooling Duplicates All (29 frames hidden) > > 2. Unhandled clojure.lang.Compiler$CompilerException > Error compiling Code/learning/Emacs/Org-mode/ob-clojure.org at (1:1) > > core.clj: 5771 clojure.core/throw-if > core.clj: 5835 clojure.core/load-lib > core.clj: 5832 clojure.core/load-lib > RestFn.java: 142 clojure.lang.RestFn/applyTo > core.clj: 659 clojure.core/apply > core.clj: 5893 clojure.core/load-libs > core.clj: 5873 clojure.core/load-libs > RestFn.java: 137 clojure.lang.RestFn/applyTo > core.clj: 659 clojure.core/apply > core.clj: 5911 clojure.core/require > core.clj: 5911 clojure.core/require > RestFn.java: 408 clojure.lang.RestFn/invoke > REPL: 1 user/eval46259/loading--auto-- > REPL: 1 user/eval46259 > REPL: 1 user/eval46259 > Compiler.java: 6977 clojure.lang.Compiler/eval > Compiler.java: 6966 clojure.lang.Compiler/eval > Compiler.java: 6940 clojure.lang.Compiler/eval > core.clj: 3187 clojure.core/eval > core.clj: 3183 clojure.core/eval > main.clj: 242 clojure.main/repl/read-eval-print/fn > main.clj: 242 clojure.main/repl/read-eval-print > main.clj: 260 clojure.main/repl/fn > main.clj: 260 clojure.main/repl > main.clj: 176 clojure.main/repl > RestFn.java: 1523 clojure.lang.RestFn/invoke > interruptible_eval.clj: 87 > clojure.tools.nrepl.middleware.interruptible-eval/evaluate/fn > AFn.java: 152 clojure.lang.AFn/applyToHelper > AFn.java: 144 clojure.lang.AFn/applyTo > core.clj: 657 clojure.core/apply > core.clj: 1963 clojure.core/with-bindings* > core.clj: 1963 clojure.core/with-bindings* > RestFn.java: 425 clojure.lang.RestFn/invoke > interruptible_eval.clj: 85 > clojure.tools.nrepl.middleware.interruptible-eval/evaluate > interruptible_eval.clj: 55 > clojure.tools.nrepl.middleware.interruptible-eval/evaluate > interruptible_eval.clj: 222 > clojure.tools.nrepl.middleware.interruptible-eval/interruptible-eval/fn/fn > interruptible_eval.clj: 190 > clojure.tools.nrepl.middleware.interruptible-eval/run-next/fn > AFn.java: 22 clojure.lang.AFn/run > ThreadPoolExecutor.java: 1142 > java.util.concurrent.ThreadPoolExecutor/runWorker > ThreadPoolExecutor.java: 617 > java.util.concurrent.ThreadPoolExecutor$Worker/run > Thread.java: 745 java.lang.Thread/run > > 1. Caused by java.lang.Exception > Found lib name 'incanter.stats' containing period with prefix 'quote'. > lib > names inside prefix lists must not contain periods > > core.clj: 659 clojure.core/apply > core.clj: 5893 clojure.core/load-libs > core.clj: 5873 clojure.core/load-libs > RestFn.java: 137 clojure.lang.RestFn/applyTo > core.clj: 659 clojure.core/apply > core.clj: 5911 clojure.core/require > core.clj: 5911 clojure.core/require > RestFn.java: 408 clojure.lang.RestFn/invoke > REPL: 1 user/eval46259/loading--auto-- > REPL: 1 user/eval46259 > REPL: 1 user/eval46259 > Compiler.java: 6977 clojure.lang.Compiler/eval > Compiler.java: 6966 clojure.lang.Compiler/eval > Compiler.java: 6940 clojure.lang.Compiler/eval > core.clj: 3187 clojure.core/eval > core.clj: 3183 clojure.core/eval > main.clj: 242 clojure.main/repl/read-eval-print/fn > main.clj: 242 clojure.main/repl/read-eval-print > main.clj: 260 clojure.main/repl/fn > main.clj: 260 clojure.main/repl > main.clj: 176 clojure.main/repl > RestFn.java: 1523 clojure.lang.RestFn/invoke > interruptible_eval.clj: 87 > clojure.tools.nrepl.middleware.interruptible-eval/evaluate/fn > AFn.java: 152 clojure.lang.AFn/applyToHelper > AFn.java: 144 clojure.lang.AFn/applyTo > core.clj: 657 clojure.core/apply > core.clj: 1963 clojure.core/with-bindings* > core.clj: 1963 clojure.core/with-bindings* > RestFn.java: 425 clojure.lang.RestFn/invoke > interruptible_eval.clj: 85 > clojure.tools.nrepl.middleware.interruptible-eval/evaluate > interruptible_eval.clj: 55 > clojure.tools.nrepl.middleware.interruptible-eval/evaluate > interruptible_eval.clj: 222 > clojure.tools.nrepl.middleware.interruptible-eval/interruptible-eval/fn/fn > interruptible_eval.clj: 190 > clojure.tools.nrepl.middleware.interruptible-eval/run-next/fn > AFn.java: 22 clojure.lang.AFn/run > ThreadPoolExecutor.java: 1142 > java.util.concurrent.ThreadPoolExecutor/runWorker > ThreadPoolExecutor.java: 617 > java.util.concurrent.ThreadPoolExecutor$Worker/run > Thread.java: 745 java.lang.Thread/run > ``` > > > [stardiviner] <Hack this world!> GPG key ID: 47C32433 > IRC(freeenode): stardiviner Twitter: @numbchild > Key fingerprint = 9BAA 92BC CDDD B9EF 3B36 CB99 B8C4 B8E5 47C3 2433 > Blog: http://stardiviner.github.io/ > > On Sat, Jun 17, 2017 at 9:46 AM, Tim Cross <theophilusx@gmail.com> wrote: > >> >> My guess is that cider is not finding the incanter package in the >> classpath when the first block attempts to evaluate. Another issue is >> that your not using any session options, so your two blocks will be >> evaluated in separate environments - not a real problem with your >> current example, but will be an issue if you expect to access incanter >> functions from separate babel blocks. >> >> There are a number of working parts which all need to be lined up >> correctly before babel clojure support will work correctly. Getting >> things to work when your just using core clojure functions is fairly >> trivial, but getting it to work when you have to pull in other >> dependencies can be a little tricky. >> >> You might find this article useful to get started >> >> http://fgiasson.com/blog/index.php/2016/06/21/optimal- >> emacs-settings-for-org-mode-for-literate-programming/ >> >> I also notice you have not set the org-babel-clojure-backend, which you >> need to do. My recommendation would be to do the following >> >> 1. Create a leinegen project to experiment with i.e. >> lein new app my-kk >> >> 2. Make sure you can edit and evaluate clojure just using clojure-mode >> and cider in emacs >> >> 3. Add the incanter package to your project.clj dependencies key >> >> 4. Modify core.clj (using clojure-mode) to include the code in your >> clojure blocks and run with cider to make sure they work as expected. >> >> 5. Create the org file you want to experiment with in the root of your >> project. This should ensure that when you try to evaluate clojure >> blocks, the cider backend will be loaded with the dependencies in the >> project.clj file. >> >> 6. Copy the code in your core.clj file into ONE babel src block and see >> if you can get it to evaluate correctly. Experiment with the block >> configuration options like :output etc. >> >> 7. Break the code up into different blocks and experiment with block >> options, especially session options. >> >> Once you get to that point, you should be across the various moving >> parts with sufficient understanding to then look at how you can tweak >> things to get exactly the behaviour and workflow you want. >> >> HTH >> >> Tim >> >> numbchild@gmail.com writes: >> >> > When Org-mode buffer like this: >> > >> > #+BEGIN_SRC clojure >> > (ns my.kk >> > (:require '[incanter.core :as kk])) >> > #+END_SRC >> > >> > #+BEGIN_SRC clojure >> > (print "hi") >> > (def kkkk "hello") >> > #+END_SRC >> > >> > #+RESULTS: >> > >> > When I have `(ns ..)` namespace clojure code in buffer, the second >> `(print >> > ..)` clojure result nothing. But when I remove the first src block, the >> > `(print ..)` clojure src block works fine. >> > >> > I'm using Org-mode version from `master` with `use-package` like this: >> > >> > (use-package org >> > :load-path "~/Code/Emacs/org-mode/lisp/" >> > :pin manual >> > :mode (("\\.org$" . org-mode)) >> > :config >> > (use-package org-plus-contrib >> > :load-path "~/Code/Emacs/org-mode/contrib/lisp/" >> > :pin manual) >> > ) >> > >> > >> > [stardiviner] <Hack this world!> GPG key ID: 47C32433 >> > IRC(freeenode): stardiviner Twitter: @numbchild >> > Key fingerprint = 9BAA 92BC CDDD B9EF 3B36 CB99 B8C4 B8E5 47C3 2433 >> > Blog: http://stardiviner.github.io/ >> >> >> -- >> Tim Cross >> -- Tim Cross ^ permalink raw reply [flat|nested] 9+ messages in thread
* Re: ob-clojure evaluate error when Org-mode buffer has ns clojure code 2017-06-18 1:10 ` Tim Cross @ 2017-06-18 5:48 ` numbchild 2017-06-21 5:12 ` numbchild 0 siblings, 1 reply; 9+ messages in thread From: numbchild @ 2017-06-18 5:48 UTC (permalink / raw) To: Tim Cross; +Cc: Org-mode [-- Attachment #1: Type: text/plain, Size: 13702 bytes --] I see, thanks very much. [stardiviner] <Hack this world!> GPG key ID: 47C32433 IRC(freeenode): stardiviner Twitter: @numbchild Key fingerprint = 9BAA 92BC CDDD B9EF 3B36 CB99 B8C4 B8E5 47C3 2433 Blog: http://stardiviner.github.io/ On Sun, Jun 18, 2017 at 9:10 AM, Tim Cross <theophilusx@gmail.com> wrote: > > It looks like you have a combination of both clojure errors and possibly > org babel errors. You need to sort out the clojure errors before you can > verify there are any problems with org babel clojure support. > > You mention that > > > I start CIDER REPL session with `cider-jack-in` without project in > > Emacs. > > but then you say > > > But I require `incanter` works, I have `incanter` in Leiningen > > dependencies. > > However, if you don't have a project, then you don't have a project.clj > file and if you don't have a project.clj file, you don't have a > :dependencies block with incanter as a specified dependency, so incanter > is not in your classpath and therefore will not be found when you try to > require it. > > Note also that you have incorrect syntax for your require > statement. Also to be clear, (ns ... (:require ...)) does not define > dependencies. It simply loads the library into the namespace. > > The correct syntax for your first block is > > (ns my-kk > (:require [incanter.core :as k])) > > There is no quote before the lib spec - this is also what the error > message is telling you. If you call require as a function, then you do > need to use the quote i.e. > > (require 'incanter.core :as k) > > You appear to have two main problems here and that is making things > 'muddy'. I'm guessing your learning clojure as well as using org babel > clojure support. You need to sort out the clojure problems first. Highly > recommend you suspend using org mode to do your clojure until your > across all the clojure specifics and have a good understanding of the > clojure environment. You will need a good understanding of how clojure > works to then be able to work out what you need to do to get it to work > with org mode. Trying to do both at the same time will just cause > confusion. > > HTH > > Tim > > numbchild@gmail.com writes: > > > I did configure `ob-clojure` with the following settings: > > > > ```elisp > > (require 'ob-clojure) > > > > ;; use CIDER as the Clojure execution backend > > (setq org-babel-clojure-backend 'cider) > > > > ;; Useful keybindings when using Clojure from Org > > ;; (org-defkey org-mode-map (kbd "C-x C-e") 'cider-eval-last-sexp) > > ;; (org-defkey org-mode-map (kbd "C-c C-d") 'cider-doc) > > > > ;; No timeout when executing calls on Cider via nrepl > > ;; (setq org-babel-clojure-sync-nrepl-timeout nil) > > > > ;; let `ob-clojure' babel src blocks allow evaluation. > > (add-to-list 'org-babel-default-header-args:clojure > > '(:eval . "yes")) > > (add-to-list 'org-babel-default-header-args:clojure > > '(:results . "output")) > > ;; (add-to-list 'org-babel-default-header-args:clojure > > ;; '(:show-process . t)) > > ``` > > > > I start CIDER REPL session with `cider-jack-in` without project in Emacs. > > > > I changed namespace to `user` in src blocks like this: > > > > ```org > > #+BEGIN_SRC clojure > > (ns user > > (:require '[incanter.core :as kk])) > > #+END_SRC > > > > #+RESULTS: > > > > #+BEGIN_SRC clojure :session :results output > > (print "hi") > > (def kkkk "hello") > > #+END_SRC > > > > #+RESULTS: > > : hi > > ``` > > > > Then it works. > > > > Seems you're right, might my first src block can't work correctly. That > > caused second src block evaluation failed. > > > > But I require `incanter` works, I have `incanter` in Leiningen > dependencies. > > ```clojure > > (require '[incanter.core :as kk]) > > ``` > > > > But include `incanter` in namespace failed: > > ```clojure > > (ns user > > (:require '[incanter.core :as kk])) > > ``` > > with the following error. > > ``` > > Show: Clojure Java REPL Tooling Duplicates All (29 frames hidden) > > > > 2. Unhandled clojure.lang.Compiler$CompilerException > > Error compiling Code/learning/Emacs/Org-mode/ob-clojure.org at (1:1) > > > > core.clj: 5771 clojure.core/throw-if > > core.clj: 5835 clojure.core/load-lib > > core.clj: 5832 clojure.core/load-lib > > RestFn.java: 142 clojure.lang.RestFn/applyTo > > core.clj: 659 clojure.core/apply > > core.clj: 5893 clojure.core/load-libs > > core.clj: 5873 clojure.core/load-libs > > RestFn.java: 137 clojure.lang.RestFn/applyTo > > core.clj: 659 clojure.core/apply > > core.clj: 5911 clojure.core/require > > core.clj: 5911 clojure.core/require > > RestFn.java: 408 clojure.lang.RestFn/invoke > > REPL: 1 user/eval46259/loading--auto-- > > REPL: 1 user/eval46259 > > REPL: 1 user/eval46259 > > Compiler.java: 6977 clojure.lang.Compiler/eval > > Compiler.java: 6966 clojure.lang.Compiler/eval > > Compiler.java: 6940 clojure.lang.Compiler/eval > > core.clj: 3187 clojure.core/eval > > core.clj: 3183 clojure.core/eval > > main.clj: 242 clojure.main/repl/read-eval-print/fn > > main.clj: 242 clojure.main/repl/read-eval-print > > main.clj: 260 clojure.main/repl/fn > > main.clj: 260 clojure.main/repl > > main.clj: 176 clojure.main/repl > > RestFn.java: 1523 clojure.lang.RestFn/invoke > > interruptible_eval.clj: 87 > > clojure.tools.nrepl.middleware.interruptible-eval/evaluate/fn > > AFn.java: 152 clojure.lang.AFn/applyToHelper > > AFn.java: 144 clojure.lang.AFn/applyTo > > core.clj: 657 clojure.core/apply > > core.clj: 1963 clojure.core/with-bindings* > > core.clj: 1963 clojure.core/with-bindings* > > RestFn.java: 425 clojure.lang.RestFn/invoke > > interruptible_eval.clj: 85 > > clojure.tools.nrepl.middleware.interruptible-eval/evaluate > > interruptible_eval.clj: 55 > > clojure.tools.nrepl.middleware.interruptible-eval/evaluate > > interruptible_eval.clj: 222 > > clojure.tools.nrepl.middleware.interruptible-eval/ > interruptible-eval/fn/fn > > interruptible_eval.clj: 190 > > clojure.tools.nrepl.middleware.interruptible-eval/run-next/fn > > AFn.java: 22 clojure.lang.AFn/run > > ThreadPoolExecutor.java: 1142 > > java.util.concurrent.ThreadPoolExecutor/runWorker > > ThreadPoolExecutor.java: 617 > > java.util.concurrent.ThreadPoolExecutor$Worker/run > > Thread.java: 745 java.lang.Thread/run > > > > 1. Caused by java.lang.Exception > > Found lib name 'incanter.stats' containing period with prefix 'quote'. > > lib > > names inside prefix lists must not contain periods > > > > core.clj: 659 clojure.core/apply > > core.clj: 5893 clojure.core/load-libs > > core.clj: 5873 clojure.core/load-libs > > RestFn.java: 137 clojure.lang.RestFn/applyTo > > core.clj: 659 clojure.core/apply > > core.clj: 5911 clojure.core/require > > core.clj: 5911 clojure.core/require > > RestFn.java: 408 clojure.lang.RestFn/invoke > > REPL: 1 user/eval46259/loading--auto-- > > REPL: 1 user/eval46259 > > REPL: 1 user/eval46259 > > Compiler.java: 6977 clojure.lang.Compiler/eval > > Compiler.java: 6966 clojure.lang.Compiler/eval > > Compiler.java: 6940 clojure.lang.Compiler/eval > > core.clj: 3187 clojure.core/eval > > core.clj: 3183 clojure.core/eval > > main.clj: 242 clojure.main/repl/read-eval-print/fn > > main.clj: 242 clojure.main/repl/read-eval-print > > main.clj: 260 clojure.main/repl/fn > > main.clj: 260 clojure.main/repl > > main.clj: 176 clojure.main/repl > > RestFn.java: 1523 clojure.lang.RestFn/invoke > > interruptible_eval.clj: 87 > > clojure.tools.nrepl.middleware.interruptible-eval/evaluate/fn > > AFn.java: 152 clojure.lang.AFn/applyToHelper > > AFn.java: 144 clojure.lang.AFn/applyTo > > core.clj: 657 clojure.core/apply > > core.clj: 1963 clojure.core/with-bindings* > > core.clj: 1963 clojure.core/with-bindings* > > RestFn.java: 425 clojure.lang.RestFn/invoke > > interruptible_eval.clj: 85 > > clojure.tools.nrepl.middleware.interruptible-eval/evaluate > > interruptible_eval.clj: 55 > > clojure.tools.nrepl.middleware.interruptible-eval/evaluate > > interruptible_eval.clj: 222 > > clojure.tools.nrepl.middleware.interruptible-eval/ > interruptible-eval/fn/fn > > interruptible_eval.clj: 190 > > clojure.tools.nrepl.middleware.interruptible-eval/run-next/fn > > AFn.java: 22 clojure.lang.AFn/run > > ThreadPoolExecutor.java: 1142 > > java.util.concurrent.ThreadPoolExecutor/runWorker > > ThreadPoolExecutor.java: 617 > > java.util.concurrent.ThreadPoolExecutor$Worker/run > > Thread.java: 745 java.lang.Thread/run > > ``` > > > > > > [stardiviner] <Hack this world!> GPG key ID: 47C32433 > > IRC(freeenode): stardiviner Twitter: @numbchild > > Key fingerprint = 9BAA 92BC CDDD B9EF 3B36 CB99 B8C4 B8E5 47C3 2433 > > Blog: http://stardiviner.github.io/ > > > > On Sat, Jun 17, 2017 at 9:46 AM, Tim Cross <theophilusx@gmail.com> > wrote: > > > >> > >> My guess is that cider is not finding the incanter package in the > >> classpath when the first block attempts to evaluate. Another issue is > >> that your not using any session options, so your two blocks will be > >> evaluated in separate environments - not a real problem with your > >> current example, but will be an issue if you expect to access incanter > >> functions from separate babel blocks. > >> > >> There are a number of working parts which all need to be lined up > >> correctly before babel clojure support will work correctly. Getting > >> things to work when your just using core clojure functions is fairly > >> trivial, but getting it to work when you have to pull in other > >> dependencies can be a little tricky. > >> > >> You might find this article useful to get started > >> > >> http://fgiasson.com/blog/index.php/2016/06/21/optimal- > >> emacs-settings-for-org-mode-for-literate-programming/ > >> > >> I also notice you have not set the org-babel-clojure-backend, which you > >> need to do. My recommendation would be to do the following > >> > >> 1. Create a leinegen project to experiment with i.e. > >> lein new app my-kk > >> > >> 2. Make sure you can edit and evaluate clojure just using clojure-mode > >> and cider in emacs > >> > >> 3. Add the incanter package to your project.clj dependencies key > >> > >> 4. Modify core.clj (using clojure-mode) to include the code in your > >> clojure blocks and run with cider to make sure they work as expected. > >> > >> 5. Create the org file you want to experiment with in the root of your > >> project. This should ensure that when you try to evaluate clojure > >> blocks, the cider backend will be loaded with the dependencies in the > >> project.clj file. > >> > >> 6. Copy the code in your core.clj file into ONE babel src block and see > >> if you can get it to evaluate correctly. Experiment with the block > >> configuration options like :output etc. > >> > >> 7. Break the code up into different blocks and experiment with block > >> options, especially session options. > >> > >> Once you get to that point, you should be across the various moving > >> parts with sufficient understanding to then look at how you can tweak > >> things to get exactly the behaviour and workflow you want. > >> > >> HTH > >> > >> Tim > >> > >> numbchild@gmail.com writes: > >> > >> > When Org-mode buffer like this: > >> > > >> > #+BEGIN_SRC clojure > >> > (ns my.kk > >> > (:require '[incanter.core :as kk])) > >> > #+END_SRC > >> > > >> > #+BEGIN_SRC clojure > >> > (print "hi") > >> > (def kkkk "hello") > >> > #+END_SRC > >> > > >> > #+RESULTS: > >> > > >> > When I have `(ns ..)` namespace clojure code in buffer, the second > >> `(print > >> > ..)` clojure result nothing. But when I remove the first src block, > the > >> > `(print ..)` clojure src block works fine. > >> > > >> > I'm using Org-mode version from `master` with `use-package` like this: > >> > > >> > (use-package org > >> > :load-path "~/Code/Emacs/org-mode/lisp/" > >> > :pin manual > >> > :mode (("\\.org$" . org-mode)) > >> > :config > >> > (use-package org-plus-contrib > >> > :load-path "~/Code/Emacs/org-mode/contrib/lisp/" > >> > :pin manual) > >> > ) > >> > > >> > > >> > [stardiviner] <Hack this world!> GPG key ID: 47C32433 > >> > IRC(freeenode): stardiviner Twitter: @numbchild > >> > Key fingerprint = 9BAA 92BC CDDD B9EF 3B36 CB99 B8C4 B8E5 47C3 2433 > >> > Blog: http://stardiviner.github.io/ > >> > >> > >> -- > >> Tim Cross > >> > > > -- > Tim Cross > [-- Attachment #2: Type: text/html, Size: 18463 bytes --] ^ permalink raw reply [flat|nested] 9+ messages in thread
* Re: ob-clojure evaluate error when Org-mode buffer has ns clojure code 2017-06-18 5:48 ` numbchild @ 2017-06-21 5:12 ` numbchild 2017-12-19 9:54 ` [UPDATE] " stardiviner 0 siblings, 1 reply; 9+ messages in thread From: numbchild @ 2017-06-21 5:12 UTC (permalink / raw) To: Tim Cross; +Cc: Org-mode [-- Attachment #1: Type: text/plain, Size: 15157 bytes --] Hi, Tim, Excuse my obstinacy, I still think the problem is in `ob-clojure.el` Because when I: ```org #+BEGIN_SRC clojure :session (ns user-kk) #+END_SRC #+BEGIN_SRC clojure :session :results output (print "hi") (def kkkk "hello") #+END_SRC #+RESULTS: ``` The second block does not return result. when I remove the first block, the second block works. Why `ob-clojure.el` don't evaluate the first block when I press [C-c C-c] on the second block, but still respect the first block's Clojure namespace definition? If it is the way `ob-clojure.el` works. I think this should have an option to disable "respecting babel clojure namespace definition". Because I use "Literate Programming" a lot. I will add some src blcoks with `(ns ...)` as example in Org-mode file. [stardiviner] <Hack this world!> GPG key ID: 47C32433 IRC(freeenode): stardiviner Twitter: @numbchild Key fingerprint = 9BAA 92BC CDDD B9EF 3B36 CB99 B8C4 B8E5 47C3 2433 Blog: http://stardiviner.github.io/ On Sun, Jun 18, 2017 at 1:48 PM, numbchild@gmail.com <numbchild@gmail.com> wrote: > I see, thanks very much. > > [stardiviner] <Hack this world!> GPG key ID: 47C32433 > IRC(freeenode): stardiviner Twitter: @numbchild > Key fingerprint = 9BAA 92BC CDDD B9EF 3B36 CB99 B8C4 B8E5 47C3 2433 > Blog: http://stardiviner.github.io/ > > On Sun, Jun 18, 2017 at 9:10 AM, Tim Cross <theophilusx@gmail.com> wrote: > >> >> It looks like you have a combination of both clojure errors and possibly >> org babel errors. You need to sort out the clojure errors before you can >> verify there are any problems with org babel clojure support. >> >> You mention that >> >> > I start CIDER REPL session with `cider-jack-in` without project in >> > Emacs. >> >> but then you say >> >> > But I require `incanter` works, I have `incanter` in Leiningen >> > dependencies. >> >> However, if you don't have a project, then you don't have a project.clj >> file and if you don't have a project.clj file, you don't have a >> :dependencies block with incanter as a specified dependency, so incanter >> is not in your classpath and therefore will not be found when you try to >> require it. >> >> Note also that you have incorrect syntax for your require >> statement. Also to be clear, (ns ... (:require ...)) does not define >> dependencies. It simply loads the library into the namespace. >> >> The correct syntax for your first block is >> >> (ns my-kk >> (:require [incanter.core :as k])) >> >> There is no quote before the lib spec - this is also what the error >> message is telling you. If you call require as a function, then you do >> need to use the quote i.e. >> >> (require 'incanter.core :as k) >> >> You appear to have two main problems here and that is making things >> 'muddy'. I'm guessing your learning clojure as well as using org babel >> clojure support. You need to sort out the clojure problems first. Highly >> recommend you suspend using org mode to do your clojure until your >> across all the clojure specifics and have a good understanding of the >> clojure environment. You will need a good understanding of how clojure >> works to then be able to work out what you need to do to get it to work >> with org mode. Trying to do both at the same time will just cause >> confusion. >> >> HTH >> >> Tim >> >> numbchild@gmail.com writes: >> >> > I did configure `ob-clojure` with the following settings: >> > >> > ```elisp >> > (require 'ob-clojure) >> > >> > ;; use CIDER as the Clojure execution backend >> > (setq org-babel-clojure-backend 'cider) >> > >> > ;; Useful keybindings when using Clojure from Org >> > ;; (org-defkey org-mode-map (kbd "C-x C-e") 'cider-eval-last-sexp) >> > ;; (org-defkey org-mode-map (kbd "C-c C-d") 'cider-doc) >> > >> > ;; No timeout when executing calls on Cider via nrepl >> > ;; (setq org-babel-clojure-sync-nrepl-timeout nil) >> > >> > ;; let `ob-clojure' babel src blocks allow evaluation. >> > (add-to-list 'org-babel-default-header-args:clojure >> > '(:eval . "yes")) >> > (add-to-list 'org-babel-default-header-args:clojure >> > '(:results . "output")) >> > ;; (add-to-list 'org-babel-default-header-args:clojure >> > ;; '(:show-process . t)) >> > ``` >> > >> > I start CIDER REPL session with `cider-jack-in` without project in >> Emacs. >> > >> > I changed namespace to `user` in src blocks like this: >> > >> > ```org >> > #+BEGIN_SRC clojure >> > (ns user >> > (:require '[incanter.core :as kk])) >> > #+END_SRC >> > >> > #+RESULTS: >> > >> > #+BEGIN_SRC clojure :session :results output >> > (print "hi") >> > (def kkkk "hello") >> > #+END_SRC >> > >> > #+RESULTS: >> > : hi >> > ``` >> > >> > Then it works. >> > >> > Seems you're right, might my first src block can't work correctly. That >> > caused second src block evaluation failed. >> > >> > But I require `incanter` works, I have `incanter` in Leiningen >> dependencies. >> > ```clojure >> > (require '[incanter.core :as kk]) >> > ``` >> > >> > But include `incanter` in namespace failed: >> > ```clojure >> > (ns user >> > (:require '[incanter.core :as kk])) >> > ``` >> > with the following error. >> > ``` >> > Show: Clojure Java REPL Tooling Duplicates All (29 frames hidden) >> > >> > 2. Unhandled clojure.lang.Compiler$CompilerException >> > Error compiling Code/learning/Emacs/Org-mode/ob-clojure.org at (1:1) >> > >> > core.clj: 5771 clojure.core/throw-if >> > core.clj: 5835 clojure.core/load-lib >> > core.clj: 5832 clojure.core/load-lib >> > RestFn.java: 142 clojure.lang.RestFn/applyTo >> > core.clj: 659 clojure.core/apply >> > core.clj: 5893 clojure.core/load-libs >> > core.clj: 5873 clojure.core/load-libs >> > RestFn.java: 137 clojure.lang.RestFn/applyTo >> > core.clj: 659 clojure.core/apply >> > core.clj: 5911 clojure.core/require >> > core.clj: 5911 clojure.core/require >> > RestFn.java: 408 clojure.lang.RestFn/invoke >> > REPL: 1 user/eval46259/loading--auto-- >> > REPL: 1 user/eval46259 >> > REPL: 1 user/eval46259 >> > Compiler.java: 6977 clojure.lang.Compiler/eval >> > Compiler.java: 6966 clojure.lang.Compiler/eval >> > Compiler.java: 6940 clojure.lang.Compiler/eval >> > core.clj: 3187 clojure.core/eval >> > core.clj: 3183 clojure.core/eval >> > main.clj: 242 clojure.main/repl/read-eval-print/fn >> > main.clj: 242 clojure.main/repl/read-eval-print >> > main.clj: 260 clojure.main/repl/fn >> > main.clj: 260 clojure.main/repl >> > main.clj: 176 clojure.main/repl >> > RestFn.java: 1523 clojure.lang.RestFn/invoke >> > interruptible_eval.clj: 87 >> > clojure.tools.nrepl.middleware.interruptible-eval/evaluate/fn >> > AFn.java: 152 clojure.lang.AFn/applyToHelper >> > AFn.java: 144 clojure.lang.AFn/applyTo >> > core.clj: 657 clojure.core/apply >> > core.clj: 1963 clojure.core/with-bindings* >> > core.clj: 1963 clojure.core/with-bindings* >> > RestFn.java: 425 clojure.lang.RestFn/invoke >> > interruptible_eval.clj: 85 >> > clojure.tools.nrepl.middleware.interruptible-eval/evaluate >> > interruptible_eval.clj: 55 >> > clojure.tools.nrepl.middleware.interruptible-eval/evaluate >> > interruptible_eval.clj: 222 >> > clojure.tools.nrepl.middleware.interruptible-eval/interrupti >> ble-eval/fn/fn >> > interruptible_eval.clj: 190 >> > clojure.tools.nrepl.middleware.interruptible-eval/run-next/fn >> > AFn.java: 22 clojure.lang.AFn/run >> > ThreadPoolExecutor.java: 1142 >> > java.util.concurrent.ThreadPoolExecutor/runWorker >> > ThreadPoolExecutor.java: 617 >> > java.util.concurrent.ThreadPoolExecutor$Worker/run >> > Thread.java: 745 java.lang.Thread/run >> > >> > 1. Caused by java.lang.Exception >> > Found lib name 'incanter.stats' containing period with prefix >> 'quote'. >> > lib >> > names inside prefix lists must not contain periods >> > >> > core.clj: 659 clojure.core/apply >> > core.clj: 5893 clojure.core/load-libs >> > core.clj: 5873 clojure.core/load-libs >> > RestFn.java: 137 clojure.lang.RestFn/applyTo >> > core.clj: 659 clojure.core/apply >> > core.clj: 5911 clojure.core/require >> > core.clj: 5911 clojure.core/require >> > RestFn.java: 408 clojure.lang.RestFn/invoke >> > REPL: 1 user/eval46259/loading--auto-- >> > REPL: 1 user/eval46259 >> > REPL: 1 user/eval46259 >> > Compiler.java: 6977 clojure.lang.Compiler/eval >> > Compiler.java: 6966 clojure.lang.Compiler/eval >> > Compiler.java: 6940 clojure.lang.Compiler/eval >> > core.clj: 3187 clojure.core/eval >> > core.clj: 3183 clojure.core/eval >> > main.clj: 242 clojure.main/repl/read-eval-print/fn >> > main.clj: 242 clojure.main/repl/read-eval-print >> > main.clj: 260 clojure.main/repl/fn >> > main.clj: 260 clojure.main/repl >> > main.clj: 176 clojure.main/repl >> > RestFn.java: 1523 clojure.lang.RestFn/invoke >> > interruptible_eval.clj: 87 >> > clojure.tools.nrepl.middleware.interruptible-eval/evaluate/fn >> > AFn.java: 152 clojure.lang.AFn/applyToHelper >> > AFn.java: 144 clojure.lang.AFn/applyTo >> > core.clj: 657 clojure.core/apply >> > core.clj: 1963 clojure.core/with-bindings* >> > core.clj: 1963 clojure.core/with-bindings* >> > RestFn.java: 425 clojure.lang.RestFn/invoke >> > interruptible_eval.clj: 85 >> > clojure.tools.nrepl.middleware.interruptible-eval/evaluate >> > interruptible_eval.clj: 55 >> > clojure.tools.nrepl.middleware.interruptible-eval/evaluate >> > interruptible_eval.clj: 222 >> > clojure.tools.nrepl.middleware.interruptible-eval/interrupti >> ble-eval/fn/fn >> > interruptible_eval.clj: 190 >> > clojure.tools.nrepl.middleware.interruptible-eval/run-next/fn >> > AFn.java: 22 clojure.lang.AFn/run >> > ThreadPoolExecutor.java: 1142 >> > java.util.concurrent.ThreadPoolExecutor/runWorker >> > ThreadPoolExecutor.java: 617 >> > java.util.concurrent.ThreadPoolExecutor$Worker/run >> > Thread.java: 745 java.lang.Thread/run >> > ``` >> > >> > >> > [stardiviner] <Hack this world!> GPG key ID: 47C32433 >> > IRC(freeenode): stardiviner Twitter: @numbchild >> > Key fingerprint = 9BAA 92BC CDDD B9EF 3B36 CB99 B8C4 B8E5 47C3 2433 >> > Blog: http://stardiviner.github.io/ >> > >> > On Sat, Jun 17, 2017 at 9:46 AM, Tim Cross <theophilusx@gmail.com> >> wrote: >> > >> >> >> >> My guess is that cider is not finding the incanter package in the >> >> classpath when the first block attempts to evaluate. Another issue is >> >> that your not using any session options, so your two blocks will be >> >> evaluated in separate environments - not a real problem with your >> >> current example, but will be an issue if you expect to access incanter >> >> functions from separate babel blocks. >> >> >> >> There are a number of working parts which all need to be lined up >> >> correctly before babel clojure support will work correctly. Getting >> >> things to work when your just using core clojure functions is fairly >> >> trivial, but getting it to work when you have to pull in other >> >> dependencies can be a little tricky. >> >> >> >> You might find this article useful to get started >> >> >> >> http://fgiasson.com/blog/index.php/2016/06/21/optimal- >> >> emacs-settings-for-org-mode-for-literate-programming/ >> >> >> >> I also notice you have not set the org-babel-clojure-backend, which you >> >> need to do. My recommendation would be to do the following >> >> >> >> 1. Create a leinegen project to experiment with i.e. >> >> lein new app my-kk >> >> >> >> 2. Make sure you can edit and evaluate clojure just using clojure-mode >> >> and cider in emacs >> >> >> >> 3. Add the incanter package to your project.clj dependencies key >> >> >> >> 4. Modify core.clj (using clojure-mode) to include the code in your >> >> clojure blocks and run with cider to make sure they work as expected. >> >> >> >> 5. Create the org file you want to experiment with in the root of your >> >> project. This should ensure that when you try to evaluate clojure >> >> blocks, the cider backend will be loaded with the dependencies in the >> >> project.clj file. >> >> >> >> 6. Copy the code in your core.clj file into ONE babel src block and see >> >> if you can get it to evaluate correctly. Experiment with the block >> >> configuration options like :output etc. >> >> >> >> 7. Break the code up into different blocks and experiment with block >> >> options, especially session options. >> >> >> >> Once you get to that point, you should be across the various moving >> >> parts with sufficient understanding to then look at how you can tweak >> >> things to get exactly the behaviour and workflow you want. >> >> >> >> HTH >> >> >> >> Tim >> >> >> >> numbchild@gmail.com writes: >> >> >> >> > When Org-mode buffer like this: >> >> > >> >> > #+BEGIN_SRC clojure >> >> > (ns my.kk >> >> > (:require '[incanter.core :as kk])) >> >> > #+END_SRC >> >> > >> >> > #+BEGIN_SRC clojure >> >> > (print "hi") >> >> > (def kkkk "hello") >> >> > #+END_SRC >> >> > >> >> > #+RESULTS: >> >> > >> >> > When I have `(ns ..)` namespace clojure code in buffer, the second >> >> `(print >> >> > ..)` clojure result nothing. But when I remove the first src block, >> the >> >> > `(print ..)` clojure src block works fine. >> >> > >> >> > I'm using Org-mode version from `master` with `use-package` like >> this: >> >> > >> >> > (use-package org >> >> > :load-path "~/Code/Emacs/org-mode/lisp/" >> >> > :pin manual >> >> > :mode (("\\.org$" . org-mode)) >> >> > :config >> >> > (use-package org-plus-contrib >> >> > :load-path "~/Code/Emacs/org-mode/contrib/lisp/" >> >> > :pin manual) >> >> > ) >> >> > >> >> > >> >> > [stardiviner] <Hack this world!> GPG key ID: 47C32433 >> >> > IRC(freeenode): stardiviner Twitter: @numbchild >> >> > Key fingerprint = 9BAA 92BC CDDD B9EF 3B36 CB99 B8C4 B8E5 47C3 2433 >> >> > Blog: http://stardiviner.github.io/ >> >> >> >> >> >> -- >> >> Tim Cross >> >> >> >> >> -- >> Tim Cross >> > > [-- Attachment #2: Type: text/html, Size: 21987 bytes --] ^ permalink raw reply [flat|nested] 9+ messages in thread
* [UPDATE] Re: ob-clojure evaluate error when Org-mode buffer has ns clojure code 2017-06-21 5:12 ` numbchild @ 2017-12-19 9:54 ` stardiviner 2017-12-21 10:15 ` numbchild 0 siblings, 1 reply; 9+ messages in thread From: stardiviner @ 2017-12-19 9:54 UTC (permalink / raw) To: Tim Cross; +Cc: Org-mode I got new update on this issue. I think it is caused by `(clojure-find-ns)`. Here is my found: I created a simple clojure project for used by all org-babel-clojure src blocks. ```elisp (progn (find-file (expand-file-name "~/.emacs.d/Org-mode/ob-clojure/src/ob_clojure/core.clj")) (cider-jack-in)) ``` I edebug the `org-babel-execute:clojure` process, `org-babel-execute:clojure' has a step: ~(clojure-find-ns)~ . This is from ~clojure-mode~. It will find current clojure buffer possible clojure namespace (even in org-mode). When I the following example org-mode buffer, it will return "namespace-not-found" error in nrepl response dict. Then src blcok has no error, not results. ```org #+BEGIN_SRC clojure :session (in-ns 'user-kk) or (ns user-kk) #+END_SRC #+BEGIN_SRC clojure :results output (print "hi") #+END_SRC ``` Here is a part of function `clojure-find-ns`: #+begin_src emacs-lisp (when (or (re-search-backward clojure-namespace-name-regex nil t) ;; Or any form at all. (and (goto-char (point-min)) (re-search-forward clojure-namespace-name-regex nil t))) (match-string-no-properties 4)) #+end_src So I created an PR to disable find namespace in Org-mode buffer: https://github.com/clojure-emacs/clojure-mode/pull/465 ^ permalink raw reply [flat|nested] 9+ messages in thread
* Re: [UPDATE] Re: ob-clojure evaluate error when Org-mode buffer has ns clojure code 2017-12-19 9:54 ` [UPDATE] " stardiviner @ 2017-12-21 10:15 ` numbchild 0 siblings, 0 replies; 9+ messages in thread From: numbchild @ 2017-12-21 10:15 UTC (permalink / raw) To: Tim Cross; +Cc: Org-mode [-- Attachment #1: Type: text/plain, Size: 2676 bytes --] Finally found a solution. really hard. spend a lot of time on this issue. The discussion is at here: https://github.com/clojure-emacs/clojure-mode/pull/465 Here is my final source code. paste here as a copy. Hope can help someone want same thing. ;; auto start CIDER REPL session in a complete Leiningen project environment for Org-mode Babel by jack-in. (add-to-list 'org-babel-default-header-args:clojure '(:session . "*cider-repl ob-clojure*")) (progn (find-file (expand-file-name "~/.emacs.d/Org-mode/ob-clojure/src/ob_clojure/core.clj")) (cider-jack-in)) (defun ob-clojure-cider-do-not-find-ns () "Fix the issue that `cider-current-ns' try to invoke `clojure-find-ns' to extract ns from buffer." (with-current-buffer "*cider-repl ob-clojure*" (defvar ob-clojure-cider-repl-ns cider-buffer-ns) (setq-local cider-buffer-ns ob-clojuure-cider-repl-ns))) (add-hook 'org-mode-hook #'ob-clojure-cider-do-not-find-ns) [stardiviner] <Hack this world!> GPG key ID: 47C32433 IRC(freeenode): stardiviner Twitter: @numbchild Key fingerprint = 9BAA 92BC CDDD B9EF 3B36 CB99 B8C4 B8E5 47C3 2433 Blog: http://stardiviner.github.io/ On Tue, Dec 19, 2017 at 5:54 PM, stardiviner <numbchild@gmail.com> wrote: > I got new update on this issue. > > I think it is caused by `(clojure-find-ns)`. > Here is my found: > > I created a simple clojure project for used by all org-babel-clojure src > blocks. > ```elisp > (progn > (find-file (expand-file-name "~/.emacs.d/Org-mode/ob-clojur > e/src/ob_clojure/core.clj")) > (cider-jack-in)) > ``` > > I edebug the `org-babel-execute:clojure` process, > > `org-babel-execute:clojure' has a step: ~(clojure-find-ns)~ . > This is from ~clojure-mode~. It will find current clojure buffer possible > clojure namespace (even in org-mode). When I the following example org-mode > buffer, it will return "namespace-not-found" error in nrepl response dict. > Then src blcok has no error, not results. > > ```org > #+BEGIN_SRC clojure :session > (in-ns 'user-kk) > or > (ns user-kk) > #+END_SRC > > #+BEGIN_SRC clojure :results output > (print "hi") > #+END_SRC > ``` > > Here is a part of function `clojure-find-ns`: > > #+begin_src emacs-lisp > (when (or (re-search-backward clojure-namespace-name-regex nil t) > ;; Or any form at all. > (and (goto-char (point-min)) > (re-search-forward clojure-namespace-name-regex nil > t))) > (match-string-no-properties 4)) > #+end_src > > So I created an PR to disable find namespace in Org-mode buffer: > https://github.com/clojure-emacs/clojure-mode/pull/465 > [-- Attachment #2: Type: text/html, Size: 3831 bytes --] ^ permalink raw reply [flat|nested] 9+ messages in thread
end of thread, other threads:[~2017-12-21 10:16 UTC | newest] Thread overview: 9+ messages (download: mbox.gz follow: Atom feed -- links below jump to the message on this page -- 2017-06-16 15:36 ob-clojure evaluate error when Org-mode buffer has ns clojure code numbchild 2017-06-17 1:46 ` Tim Cross 2017-06-17 12:57 ` numbchild 2017-06-17 13:26 ` numbchild 2017-06-18 1:10 ` Tim Cross 2017-06-18 5:48 ` numbchild 2017-06-21 5:12 ` numbchild 2017-12-19 9:54 ` [UPDATE] " stardiviner 2017-12-21 10:15 ` numbchild
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