Finally found a solution. really hard. spend a lot of time on this issue. The discussion is at here: https://github.com/clojure-emacs/clojure-mode/pull/465 Here is my final source code. paste here as a copy. Hope can help someone want same thing. ;; auto start CIDER REPL session in a complete Leiningen project environment for Org-mode Babel by jack-in. (add-to-list 'org-babel-default-header-args:clojure '(:session . "*cider-repl ob-clojure*")) (progn (find-file (expand-file-name "~/.emacs.d/Org-mode/ob-clojure/src/ob_clojure/core.clj")) (cider-jack-in)) (defun ob-clojure-cider-do-not-find-ns () "Fix the issue that `cider-current-ns' try to invoke `clojure-find-ns' to extract ns from buffer." (with-current-buffer "*cider-repl ob-clojure*" (defvar ob-clojure-cider-repl-ns cider-buffer-ns) (setq-local cider-buffer-ns ob-clojuure-cider-repl-ns))) (add-hook 'org-mode-hook #'ob-clojure-cider-do-not-find-ns) [stardiviner] GPG key ID: 47C32433 IRC(freeenode): stardiviner Twitter: @numbchild Key fingerprint = 9BAA 92BC CDDD B9EF 3B36 CB99 B8C4 B8E5 47C3 2433 Blog: http://stardiviner.github.io/ On Tue, Dec 19, 2017 at 5:54 PM, stardiviner wrote: > I got new update on this issue. > > I think it is caused by `(clojure-find-ns)`. > Here is my found: > > I created a simple clojure project for used by all org-babel-clojure src > blocks. > ```elisp > (progn > (find-file (expand-file-name "~/.emacs.d/Org-mode/ob-clojur > e/src/ob_clojure/core.clj")) > (cider-jack-in)) > ``` > > I edebug the `org-babel-execute:clojure` process, > > `org-babel-execute:clojure' has a step: ~(clojure-find-ns)~ . > This is from ~clojure-mode~. It will find current clojure buffer possible > clojure namespace (even in org-mode). When I the following example org-mode > buffer, it will return "namespace-not-found" error in nrepl response dict. > Then src blcok has no error, not results. > > ```org > #+BEGIN_SRC clojure :session > (in-ns 'user-kk) > or > (ns user-kk) > #+END_SRC > > #+BEGIN_SRC clojure :results output > (print "hi") > #+END_SRC > ``` > > Here is a part of function `clojure-find-ns`: > > #+begin_src emacs-lisp > (when (or (re-search-backward clojure-namespace-name-regex nil t) > ;; Or any form at all. > (and (goto-char (point-min)) > (re-search-forward clojure-namespace-name-regex nil > t))) > (match-string-no-properties 4)) > #+end_src > > So I created an PR to disable find namespace in Org-mode buffer: > https://github.com/clojure-emacs/clojure-mode/pull/465 >