* org-babel - First line of file created by tangle @ 2010-02-03 7:52 Rainer M Krug 2010-02-03 17:22 ` Eric Schulte 0 siblings, 1 reply; 5+ messages in thread From: Rainer M Krug @ 2010-02-03 7:52 UTC (permalink / raw) To: emacs-orgmode [-- Attachment #1.1: Type: text/plain, Size: 897 bytes --] Hi I am sure I can customize it, but I could not find it. When tangling R code, I would like to skip (or customize) the first line of the resulting R file. It reads "#!/usr/bin/env Rscript" and I would either like to exclude it completely, or replace it with e.g. "## R" I am sourcing the files anyway from a different R session and I don't need to execute them directly. Cheers, Rainer -- NEW GERMAN FAX NUMBER!!! Rainer M. Krug, PhD (Conservation Ecology, SUN), MSc (Conservation Biology, UCT), Dipl. Phys. (Germany) Centre of Excellence for Invasion Biology Natural Sciences Building Office Suite 2039 Stellenbosch University Main Campus, Merriman Avenue Stellenbosch South Africa Cell: +27 - (0)83 9479 042 Fax: +27 - (0)86 516 2782 Fax: +49 - (0)321 2125 2244 email: Rainer@krugs.de Skype: RMkrug Google: R.M.Krug@gmail.com [-- Attachment #1.2: Type: text/html, Size: 1209 bytes --] [-- Attachment #2: Type: text/plain, Size: 201 bytes --] _______________________________________________ Emacs-orgmode mailing list Please use `Reply All' to send replies to the list. Emacs-orgmode@gnu.org http://lists.gnu.org/mailman/listinfo/emacs-orgmode ^ permalink raw reply [flat|nested] 5+ messages in thread
* Re: org-babel - First line of file created by tangle 2010-02-03 7:52 org-babel - First line of file created by tangle Rainer M Krug @ 2010-02-03 17:22 ` Eric Schulte 2010-02-03 19:38 ` Rainer M Krug 0 siblings, 1 reply; 5+ messages in thread From: Eric Schulte @ 2010-02-03 17:22 UTC (permalink / raw) To: Rainer M Krug; +Cc: emacs-orgmode Hi Rainer, I just responded to your other email with a global solution to this problem. Do you think this is the sort of thing that would need to be customized on a per-block or per-file/subtree basis? If so we may want to move this customization behind a header argument. Thanks -- Eric Rainer M Krug <r.m.krug@gmail.com> writes: > Hi > > I am sure I can customize it, but I could not find it. > When tangling R code, I would like to skip (or customize) the first line of the resulting R file. It > reads "#!/usr/bin/env Rscript" and I would either like to exclude it completely, or replace it with > e.g. "## R" > > I am sourcing the files anyway from a different R session and I don't need to execute them directly. > > Cheers, > > Rainer > > -- > NEW GERMAN FAX NUMBER!!! > > Rainer M. Krug, PhD (Conservation Ecology, SUN), MSc (Conservation Biology, UCT), Dipl. Phys. > (Germany) > > Centre of Excellence for Invasion Biology > Natural Sciences Building > Office Suite 2039 > Stellenbosch University > Main Campus, Merriman Avenue > Stellenbosch > South Africa > > Cell: +27 - (0)83 9479 042 > Fax: +27 - (0)86 516 2782 > Fax: +49 - (0)321 2125 2244 > email: Rainer@krugs.de > > Skype: RMkrug > Google: R.M.Krug@gmail.com > > _______________________________________________ > Emacs-orgmode mailing list > Please use `Reply All' to send replies to the list. > Emacs-orgmode@gnu.org > http://lists.gnu.org/mailman/listinfo/emacs-orgmode ^ permalink raw reply [flat|nested] 5+ messages in thread
* Re: org-babel - First line of file created by tangle 2010-02-03 17:22 ` Eric Schulte @ 2010-02-03 19:38 ` Rainer M Krug 2010-02-03 20:15 ` Eric Schulte 0 siblings, 1 reply; 5+ messages in thread From: Rainer M Krug @ 2010-02-03 19:38 UTC (permalink / raw) To: Eric Schulte; +Cc: emacs-orgmode [-- Attachment #1.1: Type: text/plain, Size: 2993 bytes --] Hi Eric On Wed, Feb 3, 2010 at 7:22 PM, Eric Schulte <schulte.eric@gmail.com> wrote: > Hi Rainer, > > I just responded to your other email with a global solution to this > problem. Thanks - I'll look at it in detail tomorrow. > Do you think this is the sort of thing that would need to be > customized on a per-block or per-file/subtree basis? > Yes, I think it would be useful. An example would be if I want to create two scripts, where one is running on my local computer, and the other on a cluster, in which the paths might be different. Also: there is, in addition to R, also Ra, with Just-In-Time compiling functionality. It might be useful to be able to have two R scripts, one using R, the other Ra, for e.g. profiling. Another example would be to try different versions of e.g. R. So yes, I think it would be very useful to define the two additional header arguments for each block: :shebang NIL for default, other string for the shebang line :headers NIL for default, NONE for no headers, other string for custom headers > > If so we may want to move this customization behind a header argument. > That would be great Cheers, Rainer > > Thanks -- Eric > > Rainer M Krug <r.m.krug@gmail.com> writes: > > > Hi > > > > I am sure I can customize it, but I could not find it. > > When tangling R code, I would like to skip (or customize) the first line > of the resulting R file. It > > reads "#!/usr/bin/env Rscript" and I would either like to exclude it > completely, or replace it with > > e.g. "## R" > > > > I am sourcing the files anyway from a different R session and I don't > need to execute them directly. > > > > Cheers, > > > > Rainer > > > > -- > > NEW GERMAN FAX NUMBER!!! > > > > Rainer M. Krug, PhD (Conservation Ecology, SUN), MSc (Conservation > Biology, UCT), Dipl. Phys. > > (Germany) > > > > Centre of Excellence for Invasion Biology > > Natural Sciences Building > > Office Suite 2039 > > Stellenbosch University > > Main Campus, Merriman Avenue > > Stellenbosch > > South Africa > > > > Cell: +27 - (0)83 9479 042 > > Fax: +27 - (0)86 516 2782 > > Fax: +49 - (0)321 2125 2244 > > email: Rainer@krugs.de > > > > Skype: RMkrug > > Google: R.M.Krug@gmail.com > > > > _______________________________________________ > > Emacs-orgmode mailing list > > Please use `Reply All' to send replies to the list. > > Emacs-orgmode@gnu.org > > http://lists.gnu.org/mailman/listinfo/emacs-orgmode > -- NEW GERMAN FAX NUMBER!!! Rainer M. Krug, PhD (Conservation Ecology, SUN), MSc (Conservation Biology, UCT), Dipl. Phys. (Germany) Centre of Excellence for Invasion Biology Natural Sciences Building Office Suite 2039 Stellenbosch University Main Campus, Merriman Avenue Stellenbosch South Africa Cell: +27 - (0)83 9479 042 Fax: +27 - (0)86 516 2782 Fax: +49 - (0)321 2125 2244 email: Rainer@krugs.de Skype: RMkrug Google: R.M.Krug@gmail.com [-- Attachment #1.2: Type: text/html, Size: 4764 bytes --] [-- Attachment #2: Type: text/plain, Size: 201 bytes --] _______________________________________________ Emacs-orgmode mailing list Please use `Reply All' to send replies to the list. Emacs-orgmode@gnu.org http://lists.gnu.org/mailman/listinfo/emacs-orgmode ^ permalink raw reply [flat|nested] 5+ messages in thread
* Re: org-babel - First line of file created by tangle 2010-02-03 19:38 ` Rainer M Krug @ 2010-02-03 20:15 ` Eric Schulte 2010-02-04 6:47 ` Rainer M Krug 0 siblings, 1 reply; 5+ messages in thread From: Eric Schulte @ 2010-02-03 20:15 UTC (permalink / raw) To: Rainer M Krug; +Cc: emacs-orgmode Hi Rainer, Rainer M Krug <r.m.krug@gmail.com> writes: > Hi Eric [...] > So yes, I think it would be very useful to define the two additional header arguments for each > block: > > :shebang NIL for default, other string for the shebang line > :headers NIL for default, NONE for no headers, other string for custom headers > Noted: I've added this to the Org-babel development TODO list http://eschulte.github.com/babel-dev/TODO-allow-customization-of-shebang-lines-and-commenting-through-header-argument.html Thanks for the ideas! -- Eric ^ permalink raw reply [flat|nested] 5+ messages in thread
* Re: org-babel - First line of file created by tangle 2010-02-03 20:15 ` Eric Schulte @ 2010-02-04 6:47 ` Rainer M Krug 0 siblings, 0 replies; 5+ messages in thread From: Rainer M Krug @ 2010-02-04 6:47 UTC (permalink / raw) To: Eric Schulte; +Cc: emacs-orgmode [-- Attachment #1.1: Type: text/plain, Size: 1277 bytes --] On Wed, Feb 3, 2010 at 10:15 PM, Eric Schulte <schulte.eric@gmail.com>wrote: > Hi Rainer, > > Rainer M Krug <r.m.krug@gmail.com> writes: > > > Hi Eric > > [...] > > > So yes, I think it would be very useful to define the two additional > header arguments for each > > block: > > > > :shebang NIL for default, other string for the shebang line > > :headers NIL for default, NONE for no headers, other string for custom > headers > > > > Noted: I've added this to the Org-babel development TODO list > > http://eschulte.github.com/babel-dev/TODO-allow-customization-of-shebang-lines-and-commenting-through-header-argument.html > > Thanks for the ideas! -- Eric > I have to thank you, Eric, for putting it on the TODO list. I agree - :comments is better. Cheers, Rainer -- NEW GERMAN FAX NUMBER!!! Rainer M. Krug, PhD (Conservation Ecology, SUN), MSc (Conservation Biology, UCT), Dipl. Phys. (Germany) Centre of Excellence for Invasion Biology Natural Sciences Building Office Suite 2039 Stellenbosch University Main Campus, Merriman Avenue Stellenbosch South Africa Cell: +27 - (0)83 9479 042 Fax: +27 - (0)86 516 2782 Fax: +49 - (0)321 2125 2244 email: Rainer@krugs.de Skype: RMkrug Google: R.M.Krug@gmail.com [-- Attachment #1.2: Type: text/html, Size: 2053 bytes --] [-- Attachment #2: Type: text/plain, Size: 201 bytes --] _______________________________________________ Emacs-orgmode mailing list Please use `Reply All' to send replies to the list. Emacs-orgmode@gnu.org http://lists.gnu.org/mailman/listinfo/emacs-orgmode ^ permalink raw reply [flat|nested] 5+ messages in thread
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