how send babel source code to shell?

how send babel source code to shell?

[Piter_]

Hi all.
I have a source code (in matlab or python). It cosists of two blocks
(using noweb).
I can evaluate it.
But I want to send it to matlab or python shell. And inspect the
result there (variable values and so on).
Can I do it?
Thanks.
Petro.

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Re: how send babel source code to shell?

[Rainer M Krug]

On Thu, Mar 3, 2011 at 2:20 PM, Piter_ <x.piter@gmail.com> wrote:
> Hi all.
> I have a source code (in matlab or python). It cosists of two blocks
> (using noweb).
> I can evaluate it.
> But I want to send it to matlab or python shell. And inspect the
> result there (variable values and so on).
> Can I do it?

Yes - use the :session header argument.

Although I have never used in matlab or python ( I used in in R and
sh), it should work there as well.

e.g:

#+begin_src python :session WHATEVER
  DO SOMETHING
#+end_src

Cheers,

Rainer

> Thanks.
> Petro.
>
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>



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Re: how send babel source code to shell?

[Piter_]

Hi.
unfortunately it   does not work.
It does not recognize "noweb blocks"
it  sends it literally to the shell
 <<heterogeneous_fit>>
Error: Unexpected MATLAB operator.
Any advice to handle it?
Thanks.
Petro







On Thu, Mar 3, 2011 at 2:33 PM, Rainer M Krug <r.m.krug@gmail.com> wrote:
> On Thu, Mar 3, 2011 at 2:20 PM, Piter_ <x.piter@gmail.com> wrote:
>> Hi all.
>> I have a source code (in matlab or python). It cosists of two blocks
>> (using noweb).
>> I can evaluate it.
>> But I want to send it to matlab or python shell. And inspect the
>> result there (variable values and so on).
>> Can I do it?
>
> Yes - use the :session header argument.
>
> Although I have never used in matlab or python ( I used in in R and
> sh), it should work there as well.
>
> e.g:
>
> #+begin_src python :session WHATEVER
>  DO SOMETHING
> #+end_src
>
> Cheers,
>
> Rainer
>
>> Thanks.
>> Petro.
>>
>> --
>> Emacs-orgmode mailing list
>> Please use `Reply All' to send replies to the list.
>> Emacs-orgmode@gnu.org
>> http://lists.gnu.org/mailman/listinfo/emacs-orgmode
>>
>
>
>
> --
> NEW GERMAN FAX NUMBER!!!
>
> Rainer M. Krug, PhD (Conservation Ecology, SUN), MSc (Conservation
> Biology, UCT), Dipl. Phys. (Germany)
>
> Centre of Excellence for Invasion Biology
> Natural Sciences Building
> Office Suite 2039
> Stellenbosch University
> Main Campus, Merriman Avenue
> Stellenbosch
> South Africa
>
> Cell:           +27 - (0)83 9479 042
> Fax:            +27 - (0)86 516 2782
> Fax:            +49 - (0)321 2125 2244
> email:          Rainer@krugs.de
>
> Skype:          RMkrug
> Google:         R.M.Krug@gmail.com
>

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Re: how send babel source code to shell?

[Eric Schulte]

You will need to combine multiple header arguments, try something like

#+begin_src python :session *py* :noweb yes
  <<heterogeneous_fit>>
#+end_src

Please see this chapter of the manual for more information on code block
syntax and header arguments.
http://orgmode.org/manual/Working-With-Source-Code.html

Best -- Eric

Piter_ <x.piter@gmail.com> writes:

> Hi.
> unfortunately it   does not work.
> It does not recognize "noweb blocks"
> it  sends it literally to the shell
>  <<heterogeneous_fit>>
> Error: Unexpected MATLAB operator.
> Any advice to handle it?
> Thanks.
> Petro
>
>
>
>
>
>
>
> On Thu, Mar 3, 2011 at 2:33 PM, Rainer M Krug <r.m.krug@gmail.com> wrote:
>> On Thu, Mar 3, 2011 at 2:20 PM, Piter_ <x.piter@gmail.com> wrote:
>>> Hi all.
>>> I have a source code (in matlab or python). It cosists of two blocks
>>> (using noweb).
>>> I can evaluate it.
>>> But I want to send it to matlab or python shell. And inspect the
>>> result there (variable values and so on).
>>> Can I do it?
>>
>> Yes - use the :session header argument.
>>
>> Although I have never used in matlab or python ( I used in in R and
>> sh), it should work there as well.
>>
>> e.g:
>>
>> #+begin_src python :session WHATEVER
>>  DO SOMETHING
>> #+end_src
>>
>> Cheers,
>>
>> Rainer
>>
>>> Thanks.
>>> Petro.
>>>
>>> --
>>> Emacs-orgmode mailing list
>>> Please use `Reply All' to send replies to the list.
>>> Emacs-orgmode@gnu.org
>>> http://lists.gnu.org/mailman/listinfo/emacs-orgmode
>>>
>>
>>
>>
>> --
>> NEW GERMAN FAX NUMBER!!!
>>
>> Rainer M. Krug, PhD (Conservation Ecology, SUN), MSc (Conservation
>> Biology, UCT), Dipl. Phys. (Germany)
>>
>> Centre of Excellence for Invasion Biology
>> Natural Sciences Building
>> Office Suite 2039
>> Stellenbosch University
>> Main Campus, Merriman Avenue
>> Stellenbosch
>> South Africa
>>
>> Cell:           +27 - (0)83 9479 042
>> Fax:            +27 - (0)86 516 2782
>> Fax:            +49 - (0)321 2125 2244
>> email:          Rainer@krugs.de
>>
>> Skype:          RMkrug
>> Google:         R.M.Krug@gmail.com
>>

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Re: how send babel source code to shell?

[Piter_]

Thanks to everybody.
Everything is working. Somehow between yesterday (when everithing was
working) and today I made a switch from ":noweb yes" to matlab style
":noweb on" . Shame on me.


On Thu, Mar 3, 2011 at 3:04 PM, Eric Schulte <schulte.eric@gmail.com> wrote:
> You will need to combine multiple header arguments, try something like
>
> #+begin_src python :session *py* :noweb yes
>  <<heterogeneous_fit>>
> #+end_src
>
> Please see this chapter of the manual for more information on code block
> syntax and header arguments.
> http://orgmode.org/manual/Working-With-Source-Code.html
>
> Best -- Eric
>
> Piter_ <x.piter@gmail.com> writes:
>
>> Hi.
>> unfortunately it   does not work.
>> It does not recognize "noweb blocks"
>> it  sends it literally to the shell
>>  <<heterogeneous_fit>>
>> Error: Unexpected MATLAB operator.
>> Any advice to handle it?
>> Thanks.
>> Petro
>>
>>
>>
>>
>>
>>
>>
>> On Thu, Mar 3, 2011 at 2:33 PM, Rainer M Krug <r.m.krug@gmail.com> wrote:
>>> On Thu, Mar 3, 2011 at 2:20 PM, Piter_ <x.piter@gmail.com> wrote:
>>>> Hi all.
>>>> I have a source code (in matlab or python). It cosists of two blocks
>>>> (using noweb).
>>>> I can evaluate it.
>>>> But I want to send it to matlab or python shell. And inspect the
>>>> result there (variable values and so on).
>>>> Can I do it?
>>>
>>> Yes - use the :session header argument.
>>>
>>> Although I have never used in matlab or python ( I used in in R and
>>> sh), it should work there as well.
>>>
>>> e.g:
>>>
>>> #+begin_src python :session WHATEVER
>>>  DO SOMETHING
>>> #+end_src
>>>
>>> Cheers,
>>>
>>> Rainer
>>>
>>>> Thanks.
>>>> Petro.
>>>>
>>>> --
>>>> Emacs-orgmode mailing list
>>>> Please use `Reply All' to send replies to the list.
>>>> Emacs-orgmode@gnu.org
>>>> http://lists.gnu.org/mailman/listinfo/emacs-orgmode
>>>>
>>>
>>>
>>>
>>> --
>>> NEW GERMAN FAX NUMBER!!!
>>>
>>> Rainer M. Krug, PhD (Conservation Ecology, SUN), MSc (Conservation
>>> Biology, UCT), Dipl. Phys. (Germany)
>>>
>>> Centre of Excellence for Invasion Biology
>>> Natural Sciences Building
>>> Office Suite 2039
>>> Stellenbosch University
>>> Main Campus, Merriman Avenue
>>> Stellenbosch
>>> South Africa
>>>
>>> Cell:           +27 - (0)83 9479 042
>>> Fax:            +27 - (0)86 516 2782
>>> Fax:            +49 - (0)321 2125 2244
>>> email:          Rainer@krugs.de
>>>
>>> Skype:          RMkrug
>>> Google:         R.M.Krug@gmail.com
>>>
>

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