* Getting source code to work @ 2012-08-01 18:51 Mark Stoehr 2012-08-01 19:07 ` Thomas S. Dye 2012-08-01 19:11 ` Nick Dokos 0 siblings, 2 replies; 9+ messages in thread From: Mark Stoehr @ 2012-08-01 18:51 UTC (permalink / raw) To: emacs-orgmode Hi, I'm trying to include python source code in my document and I'm finding that org-babel-execute-buffer ( as well as C-c C-c at the end of a code block) does not successfully run my code, instead I get an error "Invalid function: org-save-outline-visibility". I saw messages earlier http://thread.gmane.org/gmane.emacs.orgmode/28048/focus=28049 regarding an apparently similar problem but my understanding of emacs lisp is insufficient for me to make sense of it. My program: #+BEGIN_SRC python print "Hello World" return 1+2 #+END_SRC I also have trouble getting tangle to work. With the following problem #+BEGIN_SRC python :tangle yes print "Hello World" return 1+2 #+END_SRC both C-c C-v t and M-x org-babel-tangle fail saying that 0 blocks have been tangled. I also tried the examples with the #+BEGIN_SRC and #+END_SRC being in lowercase and that didn't change anything. ^ permalink raw reply [flat|nested] 9+ messages in thread
* Re: Getting source code to work 2012-08-01 18:51 Getting source code to work Mark Stoehr @ 2012-08-01 19:07 ` Thomas S. Dye 2012-08-01 19:11 ` Mark Stoehr 2012-08-01 19:11 ` Nick Dokos 1 sibling, 1 reply; 9+ messages in thread From: Thomas S. Dye @ 2012-08-01 19:07 UTC (permalink / raw) To: Mark Stoehr; +Cc: emacs-orgmode Aloha Mark, Mark Stoehr <stoehr@cs.uchicago.edu> writes: > Hi, I'm trying to include python source code in my document and I'm > finding that org-babel-execute-buffer ( as well as C-c C-c at the end > of a code block) does not successfully run my code, instead I get an > error "Invalid function: org-save-outline-visibility". I saw messages > earlier > > http://thread.gmane.org/gmane.emacs.orgmode/28048/focus=28049 > > regarding an apparently similar problem but my understanding of emacs > lisp is insufficient for me to make sense of it. My program: > > #+BEGIN_SRC python > print "Hello World" > return 1+2 > #+END_SRC > > > I also have trouble getting tangle to work. With the following problem > > > #+BEGIN_SRC python :tangle yes > print "Hello World" > return 1+2 > #+END_SRC > > both C-c C-v t and M-x org-babel-tangle fail saying that 0 blocks have > been tangled. I also tried the examples with the #+BEGIN_SRC and > #+END_SRC being in lowercase and that didn't change anything. > > Your source code block evaluates fine on my setup: #+BEGIN_SRC python print "Hello World" return 1+2 #+END_SRC #+RESULTS: : 3 The error message you are getting refers to a bug that was apparently fixed some time ago. What version of Org mode are you running? Also, did you tell Org mode that you will be evaluating Python code? You should have something like this in .emacs: (org-babel-do-load-languages 'org-babel-load-languages '((R . t) (C . t) (ditaa . t) (dot . t) (emacs-lisp . t) (gnuplot . nil) (haskell . nil) (latex . t) (lisp . t) (ocaml . nil) (org . t) (perl . t) (python . t) # This is the line you'll need (ruby . nil) (screen . nil) (sh . t) (sql . nil) (sqlite . t))) hth, Tom -- Thomas S. Dye http://www.tsdye.com ^ permalink raw reply [flat|nested] 9+ messages in thread
* Re: Getting source code to work 2012-08-01 19:07 ` Thomas S. Dye @ 2012-08-01 19:11 ` Mark Stoehr 2012-08-01 19:48 ` Thomas S. Dye 2012-08-01 22:27 ` Rasmus 0 siblings, 2 replies; 9+ messages in thread From: Mark Stoehr @ 2012-08-01 19:11 UTC (permalink / raw) To: Thomas S. Dye; +Cc: emacs-orgmode Thanks Tom, I do have (org-babel-do-load-languages 'org-babel-load-languages '((python . t) (R . t))) in my ~/.emacs.d/init.el and my version (from M-x org-version) is Org-mode version 7.8.11 Cheers, Mark On Wed, Aug 1, 2012 at 2:07 PM, Thomas S. Dye <tsd@tsdye.com> wrote: > Aloha Mark, > > Mark Stoehr <stoehr@cs.uchicago.edu> writes: > >> Hi, I'm trying to include python source code in my document and I'm >> finding that org-babel-execute-buffer ( as well as C-c C-c at the end >> of a code block) does not successfully run my code, instead I get an >> error "Invalid function: org-save-outline-visibility". I saw messages >> earlier >> >> http://thread.gmane.org/gmane.emacs.orgmode/28048/focus=28049 >> >> regarding an apparently similar problem but my understanding of emacs >> lisp is insufficient for me to make sense of it. My program: >> >> #+BEGIN_SRC python >> print "Hello World" >> return 1+2 >> #+END_SRC >> >> >> I also have trouble getting tangle to work. With the following problem >> >> >> #+BEGIN_SRC python :tangle yes >> print "Hello World" >> return 1+2 >> #+END_SRC >> >> both C-c C-v t and M-x org-babel-tangle fail saying that 0 blocks have >> been tangled. I also tried the examples with the #+BEGIN_SRC and >> #+END_SRC being in lowercase and that didn't change anything. >> >> > > Your source code block evaluates fine on my setup: > > #+BEGIN_SRC python > print "Hello World" > return 1+2 > #+END_SRC > > #+RESULTS: > : 3 > > The error message you are getting refers to a bug that was apparently > fixed some time ago. What version of Org mode are you running? > > Also, did you tell Org mode that you will be evaluating Python code? > You should have something like this in .emacs: > > (org-babel-do-load-languages > 'org-babel-load-languages > '((R . t) > (C . t) > (ditaa . t) > (dot . t) > (emacs-lisp . t) > (gnuplot . nil) > (haskell . nil) > (latex . t) > (lisp . t) > (ocaml . nil) > (org . t) > (perl . t) > (python . t) # This is the line you'll need > (ruby . nil) > (screen . nil) > (sh . t) > (sql . nil) > (sqlite . t))) > > hth, > Tom > > -- > Thomas S. Dye > http://www.tsdye.com > ^ permalink raw reply [flat|nested] 9+ messages in thread
* Re: Getting source code to work 2012-08-01 19:11 ` Mark Stoehr @ 2012-08-01 19:48 ` Thomas S. Dye 2012-08-01 22:27 ` Rasmus 1 sibling, 0 replies; 9+ messages in thread From: Thomas S. Dye @ 2012-08-01 19:48 UTC (permalink / raw) To: Mark Stoehr; +Cc: emacs-orgmode Hi Mark, Perhaps someone else can reproduce the problem then? I'm not able to reproduce it. If not, then one of the elisp wizards on this list might be able to point out likely problems with your setup. All the best, Tom Mark Stoehr <stoehr@cs.uchicago.edu> writes: > Thanks Tom, > > I do have > > (org-babel-do-load-languages > 'org-babel-load-languages '((python . t) > (R . t))) > > in my ~/.emacs.d/init.el > > and my version (from M-x org-version) is > Org-mode version 7.8.11 > > Cheers, > Mark > > On Wed, Aug 1, 2012 at 2:07 PM, Thomas S. Dye <tsd@tsdye.com> wrote: >> Aloha Mark, >> >> Mark Stoehr <stoehr@cs.uchicago.edu> writes: >> >>> Hi, I'm trying to include python source code in my document and I'm >>> finding that org-babel-execute-buffer ( as well as C-c C-c at the end >>> of a code block) does not successfully run my code, instead I get an >>> error "Invalid function: org-save-outline-visibility". I saw messages >>> earlier >>> >>> http://thread.gmane.org/gmane.emacs.orgmode/28048/focus=28049 >>> >>> regarding an apparently similar problem but my understanding of emacs >>> lisp is insufficient for me to make sense of it. My program: >>> >>> #+BEGIN_SRC python >>> print "Hello World" >>> return 1+2 >>> #+END_SRC >>> >>> >>> I also have trouble getting tangle to work. With the following problem >>> >>> >>> #+BEGIN_SRC python :tangle yes >>> print "Hello World" >>> return 1+2 >>> #+END_SRC >>> >>> both C-c C-v t and M-x org-babel-tangle fail saying that 0 blocks have >>> been tangled. I also tried the examples with the #+BEGIN_SRC and >>> #+END_SRC being in lowercase and that didn't change anything. >>> >>> >> >> Your source code block evaluates fine on my setup: >> >> #+BEGIN_SRC python >> print "Hello World" >> return 1+2 >> #+END_SRC >> >> #+RESULTS: >> : 3 >> >> The error message you are getting refers to a bug that was apparently >> fixed some time ago. What version of Org mode are you running? >> >> Also, did you tell Org mode that you will be evaluating Python code? >> You should have something like this in .emacs: >> >> (org-babel-do-load-languages >> 'org-babel-load-languages >> '((R . t) >> (C . t) >> (ditaa . t) >> (dot . t) >> (emacs-lisp . t) >> (gnuplot . nil) >> (haskell . nil) >> (latex . t) >> (lisp . t) >> (ocaml . nil) >> (org . t) >> (perl . t) >> (python . t) # This is the line you'll need >> (ruby . nil) >> (screen . nil) >> (sh . t) >> (sql . nil) >> (sqlite . t))) >> >> hth, >> Tom >> >> -- >> Thomas S. Dye >> http://www.tsdye.com >> -- T.S. Dye & Colleagues, Archaeologists 735 Bishop St, Suite 315, Honolulu, HI 96813 Tel: 808-529-0866, Fax: 808-529-0884 http://www.tsdye.com ^ permalink raw reply [flat|nested] 9+ messages in thread
* Re: Getting source code to work 2012-08-01 19:11 ` Mark Stoehr 2012-08-01 19:48 ` Thomas S. Dye @ 2012-08-01 22:27 ` Rasmus 1 sibling, 0 replies; 9+ messages in thread From: Rasmus @ 2012-08-01 22:27 UTC (permalink / raw) To: emacs-orgmode Mark Stoehr <stoehr@cs.uchicago.edu> writes: > and my version (from M-x org-version) is > Org-mode version 7.8.11 How about sh> python --version On my system where python is 3.2.3 and python2 is 2.7.3 I have (setq org-babel-python-command "python2") –Rasmus -- Hooray! ^ permalink raw reply [flat|nested] 9+ messages in thread
* Re: Getting source code to work 2012-08-01 18:51 Getting source code to work Mark Stoehr 2012-08-01 19:07 ` Thomas S. Dye @ 2012-08-01 19:11 ` Nick Dokos 2012-08-01 19:18 ` Mark Stoehr 1 sibling, 1 reply; 9+ messages in thread From: Nick Dokos @ 2012-08-01 19:11 UTC (permalink / raw) To: Mark Stoehr; +Cc: emacs-orgmode Mark Stoehr <stoehr@cs.uchicago.edu> wrote: > Hi, I'm trying to include python source code in my document and I'm > finding that org-babel-execute-buffer ( as well as C-c C-c at the end > of a code block) does not successfully run my code, instead I get an > error "Invalid function: org-save-outline-visibility". I saw messages > earlier > > http://thread.gmane.org/gmane.emacs.orgmode/28048/focus=28049 > > regarding an apparently similar problem but my understanding of emacs > lisp is insufficient for me to make sense of it. My program: > > #+BEGIN_SRC python > print "Hello World" > return 1+2 > #+END_SRC > > > I also have trouble getting tangle to work. With the following problem > > > #+BEGIN_SRC python :tangle yes > print "Hello World" > return 1+2 > #+END_SRC > > both C-c C-v t and M-x org-babel-tangle fail saying that 0 blocks have > been tangled. I also tried the examples with the #+BEGIN_SRC and > #+END_SRC being in lowercase and that didn't change anything. > Cannot reproduce either problem: the code block produces a #+RESULTS: : 3 and the tangle says: tangled 1 code block from mark-stoehr.org Nick Version info: Org-mode version 7.8.11 (release_7.8.11-260-ga15b7d @ /home/nick/elisp/org-mode/lisp/) (includes a few local commits) GNU Emacs 24.1.50.1 (x86_64-unknown-linux-gnu, GTK+ Version 2.24.4) of 2012-07-28 ^ permalink raw reply [flat|nested] 9+ messages in thread
* Re: Getting source code to work 2012-08-01 19:11 ` Nick Dokos @ 2012-08-01 19:18 ` Mark Stoehr 2012-08-01 19:58 ` Eric Schulte 2012-08-01 20:00 ` Nick Dokos 0 siblings, 2 replies; 9+ messages in thread From: Mark Stoehr @ 2012-08-01 19:18 UTC (permalink / raw) To: nicholas.dokos; +Cc: emacs-orgmode I just installed emacs and org-mode on a new machine, do you have any suggestions for debugging this? Mark On Wed, Aug 1, 2012 at 2:11 PM, Nick Dokos <nicholas.dokos@hp.com> wrote: > Mark Stoehr <stoehr@cs.uchicago.edu> wrote: > >> Hi, I'm trying to include python source code in my document and I'm >> finding that org-babel-execute-buffer ( as well as C-c C-c at the end >> of a code block) does not successfully run my code, instead I get an >> error "Invalid function: org-save-outline-visibility". I saw messages >> earlier >> >> http://thread.gmane.org/gmane.emacs.orgmode/28048/focus=28049 >> >> regarding an apparently similar problem but my understanding of emacs >> lisp is insufficient for me to make sense of it. My program: >> >> #+BEGIN_SRC python >> print "Hello World" >> return 1+2 >> #+END_SRC >> >> >> I also have trouble getting tangle to work. With the following problem >> >> >> #+BEGIN_SRC python :tangle yes >> print "Hello World" >> return 1+2 >> #+END_SRC >> >> both C-c C-v t and M-x org-babel-tangle fail saying that 0 blocks have >> been tangled. I also tried the examples with the #+BEGIN_SRC and >> #+END_SRC being in lowercase and that didn't change anything. >> > > Cannot reproduce either problem: the code block produces a > > #+RESULTS: > : 3 > > and the tangle says: > > tangled 1 code block from mark-stoehr.org > > Nick > > Version info: > > Org-mode version 7.8.11 (release_7.8.11-260-ga15b7d @ /home/nick/elisp/org-mode/lisp/) > (includes a few local commits) > > GNU Emacs 24.1.50.1 (x86_64-unknown-linux-gnu, GTK+ Version 2.24.4) of 2012-07-28 > ^ permalink raw reply [flat|nested] 9+ messages in thread
* Re: Getting source code to work 2012-08-01 19:18 ` Mark Stoehr @ 2012-08-01 19:58 ` Eric Schulte 2012-08-01 20:00 ` Nick Dokos 1 sibling, 0 replies; 9+ messages in thread From: Eric Schulte @ 2012-08-01 19:58 UTC (permalink / raw) To: Mark Stoehr; +Cc: nicholas.dokos, emacs-orgmode Mark Stoehr <stoehr@cs.uchicago.edu> writes: > I just installed emacs and org-mode on a new machine, do you have any > suggestions for debugging this? > Hi Mark, What version of Org-mode do you have installed? What version of Emacs are you using? Does the problem persist when you start emacs with "emacs -Q"? -- Eric Schulte http://cs.unm.edu/~eschulte ^ permalink raw reply [flat|nested] 9+ messages in thread
* Re: Getting source code to work 2012-08-01 19:18 ` Mark Stoehr 2012-08-01 19:58 ` Eric Schulte @ 2012-08-01 20:00 ` Nick Dokos 1 sibling, 0 replies; 9+ messages in thread From: Nick Dokos @ 2012-08-01 20:00 UTC (permalink / raw) To: Mark Stoehr; +Cc: emacs-orgmode Mark Stoehr <stoehr@cs.uchicago.edu> wrote: > I just installed emacs and org-mode on a new machine, do you have any > suggestions for debugging this? > No easy way, I'm afraid (but maybe somebody else can think of something better). I usually run edebug on the suspect function and single step through it, examining variables as I go. For details on edebug, see the emacs lisp manual, section 18.2 "Edebug". Nick > Mark > > On Wed, Aug 1, 2012 at 2:11 PM, Nick Dokos <nicholas.dokos@hp.com> wrote: > > Mark Stoehr <stoehr@cs.uchicago.edu> wrote: > > > >> Hi, I'm trying to include python source code in my document and I'm > >> finding that org-babel-execute-buffer ( as well as C-c C-c at the end > >> of a code block) does not successfully run my code, instead I get an > >> error "Invalid function: org-save-outline-visibility". I saw messages > >> earlier > >> > >> http://thread.gmane.org/gmane.emacs.orgmode/28048/focus=28049 > >> > >> regarding an apparently similar problem but my understanding of emacs > >> lisp is insufficient for me to make sense of it. My program: > >> > >> #+BEGIN_SRC python > >> print "Hello World" > >> return 1+2 > >> #+END_SRC > >> > >> > >> I also have trouble getting tangle to work. With the following problem > >> > >> > >> #+BEGIN_SRC python :tangle yes > >> print "Hello World" > >> return 1+2 > >> #+END_SRC > >> > >> both C-c C-v t and M-x org-babel-tangle fail saying that 0 blocks have > >> been tangled. I also tried the examples with the #+BEGIN_SRC and > >> #+END_SRC being in lowercase and that didn't change anything. > >> > > > > Cannot reproduce either problem: the code block produces a > > > > #+RESULTS: > > : 3 > > > > and the tangle says: > > > > tangled 1 code block from mark-stoehr.org > > > > Nick > > > > Version info: > > > > Org-mode version 7.8.11 (release_7.8.11-260-ga15b7d @ /home/nick/elisp/org-mode/lisp/) > > (includes a few local commits) > > > > GNU Emacs 24.1.50.1 (x86_64-unknown-linux-gnu, GTK+ Version 2.24.4) of 2012-07-28 > > > ^ permalink raw reply [flat|nested] 9+ messages in thread
end of thread, other threads:[~2012-08-01 22:27 UTC | newest] Thread overview: 9+ messages (download: mbox.gz / follow: Atom feed) -- links below jump to the message on this page -- 2012-08-01 18:51 Getting source code to work Mark Stoehr 2012-08-01 19:07 ` Thomas S. Dye 2012-08-01 19:11 ` Mark Stoehr 2012-08-01 19:48 ` Thomas S. Dye 2012-08-01 22:27 ` Rasmus 2012-08-01 19:11 ` Nick Dokos 2012-08-01 19:18 ` Mark Stoehr 2012-08-01 19:58 ` Eric Schulte 2012-08-01 20:00 ` Nick Dokos
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