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From: Sanjib Sikder <sanjibju2002@gmail.com>
To: "Thomas S. Dye" <tsd@tsdye.com>
Cc: emacs-orgmode@gnu.org
Subject: Re: Fwd: Citation in org mode does not compile
Date: Thu, 27 Sep 2012 08:44:53 +0530	[thread overview]
Message-ID: <CAL1SgUo2Uwe9eE+-JYvUTzvrC8fM6rB+ocH_N7GTdQZuOFpz+g@mail.gmail.com> (raw)
In-Reply-To: <CAL1SgUpPTywNvcxoZXzN7x+zdFkfh+YRCgFKZM9wwnRhDz84vQ@mail.gmail.com>

[-- Attachment #1: Type: text/plain, Size: 9981 bytes --]

HI,

Just now I have found that now I am not even getting the pdf. I am pasting
the error messages below.

/usr/bin/texi2dvi: Processing /home/sanjib/Ubuntu
One/EmacsFilesUO/OrgFilesUO/PhD_IITB/TestSciDocu.tex ...
/usr/bin/texi2dvi: BIBINPUTS='.:/home/sanjib/Ubuntu
One/EmacsFilesUO/OrgFilesUO/PhD_IITB:/home/sanjib/Ubuntu
One/EmacsFilesUO/OrgFilesUO/PhD_IITB::'
/usr/bin/texi2dvi: BSTINPUTS='.:/home/sanjib/Ubuntu
One/EmacsFilesUO/OrgFilesUO/PhD_IITB:/home/sanjib/Ubuntu
One/EmacsFilesUO/OrgFilesUO/PhD_IITB::'
/usr/bin/texi2dvi: DVIPSHEADERS='.:/home/sanjib/Ubuntu
One/EmacsFilesUO/OrgFilesUO/PhD_IITB:/home/sanjib/Ubuntu
One/EmacsFilesUO/OrgFilesUO/PhD_IITB::'
/usr/bin/texi2dvi: INDEXSTYLE='.:/home/sanjib/Ubuntu
One/EmacsFilesUO/OrgFilesUO/PhD_IITB:/home/sanjib/Ubuntu
One/EmacsFilesUO/OrgFilesUO/PhD_IITB::'
/usr/bin/texi2dvi: MFINPUTS='.:/home/sanjib/Ubuntu
One/EmacsFilesUO/OrgFilesUO/PhD_IITB:/home/sanjib/Ubuntu
One/EmacsFilesUO/OrgFilesUO/PhD_IITB::'
/usr/bin/texi2dvi: MPINPUTS='.:/home/sanjib/Ubuntu
One/EmacsFilesUO/OrgFilesUO/PhD_IITB:/home/sanjib/Ubuntu
One/EmacsFilesUO/OrgFilesUO/PhD_IITB::'
/usr/bin/texi2dvi: TEXINPUTS='.:/home/sanjib/Ubuntu
One/EmacsFilesUO/OrgFilesUO/PhD_IITB:/home/sanjib/Ubuntu
One/EmacsFilesUO/OrgFilesUO/PhD_IITB::'
/usr/bin/texi2dvi: TFMFONTS='.:/home/sanjib/Ubuntu
One/EmacsFilesUO/OrgFilesUO/PhD_IITB:/home/sanjib/Ubuntu
One/EmacsFilesUO/OrgFilesUO/PhD_IITB::'
/usr/bin/texi2dvi: cd /home/sanjib/Ubuntu
One/EmacsFilesUO/OrgFilesUO/PhD_IITB/TestSciDocu.t2d/pdf/build
/usr/bin/texi2dvi: Cycle 1 for /home/sanjib/Ubuntu
One/EmacsFilesUO/OrgFilesUO/PhD_IITB/TestSciDocu.tex
/usr/bin/texi2dvi: Running rm -f TestSciDocu.tex
/usr/bin/texi2dvi: Running ln -s /home/sanjib/Ubuntu
One/EmacsFilesUO/OrgFilesUO/PhD_IITB/TestSciDocu.tex
/usr/bin/texi2dvi: /usr/bin/texi2dvi: Running pdflatex --file-line-error
</dev/null '
onstopmode' 'This is pdfTeX, Version 3.1415926-1.40.10 (TeX Live
2009/Debian)
entering extended mode
LaTeX2e <2009/09/24>
Babel <v3.8l> and hyphenation patterns for english, usenglishmax, dumylang,
noh
yphenation, loaded.

(./TestSciDocu.tex (/usr/share/texmf-texlive/tex/latex/base/article.cls
Document Class: article 2007/10/19 v1.4h Standard LaTeX document class
(/usr/share/texmf-texlive/tex/latex/base/size11.clo))
(/usr/share/texmf-texlive/tex/latex/base/inputenc.sty
(/usr/share/texmf-texlive/tex/latex/base/utf8.def
(/usr/share/texmf-texlive/tex/latex/base/t1enc.dfu)
(/usr/share/texmf-texlive/tex/latex/base/ot1enc.dfu)
(/usr/share/texmf-texlive/tex/latex/base/omsenc.dfu)))
(/usr/share/texmf-texlive/tex/latex/base/fontenc.sty
(/usr/share/texmf-texlive/tex/latex/base/t1enc.def))
(/usr/share/texmf-texlive/tex/latex/base/fixltx2e.sty)
(/usr/share/texmf-texlive/tex/latex/graphics/graphicx.sty
(/usr/share/texmf-texlive/tex/latex/graphics/keyval.sty)
(/usr/share/texmf-texlive/tex/latex/graphics/graphics.sty
(/usr/share/texmf-texlive/tex/latex/graphics/trig.sty)
(/etc/texmf/tex/latex/config/graphics.cfg)
(/usr/share/texmf-texlive/tex/latex/pdftex-def/pdftex.def)))
(/usr/share/texmf-texlive/tex/latex/tools/longtable.sty)
(/usr/share/texmf-texlive/tex/latex/float/float.sty)
(/usr/share/texmf-texlive/tex/latex/wrapfig/wrapfig.sty)
(/usr/share/texmf-texlive/tex/latex/soul/soul.sty)
(/usr/share/texmf-texlive/tex/latex/base/textcomp.sty
(/usr/share/texmf-texlive/tex/latex/base/ts1enc.def
(/usr/share/texmf-texlive/tex/latex/base/ts1enc.dfu)))
(/usr/share/texmf-texlive/tex/latex/marvosym/marvosym.sty)
(/usr/share/texmf-texlive/tex/latex/wasysym/wasysym.sty)
(/usr/share/texmf-texlive/tex/latex/base/latexsym.sty)
(/usr/share/texmf-texlive/tex/latex/amsfonts/amssymb.sty
(/usr/share/texmf-texlive/tex/latex/amsfonts/amsfonts.sty))
(/usr/share/texmf-texlive/tex/latex/hyperref/hyperref.sty
(/usr/share/texmf-texlive/tex/generic/oberdiek/ifpdf.sty)
(/usr/share/texmf-texlive/tex/generic/oberdiek/ifvtex.sty)
(/usr/share/texmf-texlive/tex/generic/ifxetex/ifxetex.sty)
(/usr/share/texmf-texlive/tex/latex/oberdiek/hycolor.sty
(/usr/share/texmf-texlive/tex/latex/oberdiek/xcolor-patch.sty))
(/usr/share/texmf-texlive/tex/latex/hyperref/pd1enc.def)
(/usr/share/texmf-texlive/tex/generic/oberdiek/etexcmds.sty
(/usr/share/texmf-texlive/tex/generic/oberdiek/infwarerr.sty))
(/usr/share/texmf-texlive/tex/latex/latexconfig/hyperref.cfg)
(/usr/share/texmf-texlive/tex/latex/oberdiek/kvoptions.sty
(/usr/share/texmf-texlive/tex/generic/oberdiek/kvsetkeys.sty))
Implicit mode ON; LaTeX internals redefined
(/usr/share/texmf-texlive/tex/latex/ltxmisc/url.sty)
(/usr/share/texmf-texlive/tex/generic/oberdiek/bitset.sty
(/usr/share/texmf-texlive/tex/generic/oberdiek/intcalc.sty)
(/usr/share/texmf-texlive/tex/generic/oberdiek/bigintcalc.sty
(/usr/share/texmf-texlive/tex/generic/oberdiek/pdftexcmds.sty
(/usr/share/texmf-texlive/tex/generic/oberdiek/ifluatex.sty)
(/usr/share/texmf-texlive/tex/generic/oberdiek/ltxcmds.sty))))
(/usr/share/texmf-texlive/tex/generic/oberdiek/atbegshi.sty))
*hyperref using default driver hpdftex*
(/usr/share/texmf-texlive/tex/latex/hyperref/hpdftex.def)
(/usr/share/texmf-texlive/tex/latex/natbib/natbib.sty)
No file TestSciDocu.aux.
(/usr/share/texmf-texlive/tex/latex/base/ts1cmr.fd)
(/usr/share/texmf-texlive/tex/context/base/supp-pdf.mkii
[Loading MPS to PDF converter (version 2006.09.02).]
) (/usr/share/texmf-texlive/tex/latex/hyperref/nameref.sty
(/usr/share/texmf-texlive/tex/latex/oberdiek/refcount.sty))
(/usr/share/texmf-texlive/tex/latex/wasysym/uwasy.fd)
(/usr/share/texmf-texlive/tex/latex/base/ulasy.fd)
(/usr/share/texmf-texlive/tex/latex/amsfonts/umsa.fd)
(/usr/share/texmf-texlive/tex/latex/amsfonts/umsb.fd)

Package natbib Warning: Citation `biswas2008generalized' on page 1
undefined on
 input line 52.


Package natbib Warning: Citation `cai1992length' on page 1 undefined on
input l
ine 53.

(/usr/share/texmf-texlive/tex/latex/base/t1cmtt.fd)

LaTeX Warning: Hyper reference `sec-1' on page 1 undefined on input line 76.

[1{/var/lib/texmf/fonts/map/pdftex/updmap/pdftex.map}]
No file TestSciDocu.bbl.
[2]

Package natbib Warning: There were undefined citations.

(./TestSciDocu.aux)

LaTeX Warning: There were undefined references.


LaTeX Warning: Label(s) may have changed. Rerun to get cross-references
right.

 )pdfTeX warning (dest): name{??} has been referenced but does not exist,
repla
ced by a fixed one

 </home/sanjib/.texmf-var/fonts/pk/ljfour/jknappen/ec/ectt1095.600pk>
</home/sa
njib/.texmf-var/fonts/pk/ljfour/jknappen/ec/tcrm1095.600pk>
</home/sanjib/.texm
f-var/fonts/pk/ljfour/jknappen/ec/ecbx1095.600pk>
</home/sanjib/.texmf-var/font
s/pk/ljfour/jknappen/ec/ecrm1095.600pk>
</home/sanjib/.texmf-var/fonts/pk/ljfou
r/jknappen/ec/ecbx1200.600pk>
</home/sanjib/.texmf-var/fonts/pk/ljfour/jknappen
/ec/ecbx1440.600pk>
</home/sanjib/.texmf-var/fonts/pk/ljfour/jknappen/ec/ecrm12
00.600pk>
</home/sanjib/.texmf-var/fonts/pk/ljfour/jknappen/ec/ecrm1728.600pk><
/usr/share/texmf-texlive/fonts/type1/public/amsfonts/cm/cmmi10.pfb></usr/share/
texmf-texlive/fonts/type1/public/amsfonts/cm/cmr10.pfb>
Output written on TestSciDocu.pdf (2 pages, 68665 bytes).
Transcript written on TestSciDocu.log.
/usr/bin/texi2dvi: 1: cd: can't cd to /home/sanjib/Ubuntu
/usr/bin/texi2dvi: Removing /home/sanjib/Ubuntu
One/EmacsFilesUO/OrgFilesUO/PhD_IITB/TestSciDocu.t2d


-----------------------------
*Sanjib Sikder
*Ph.D. Fellow
Chemical Engineering
IIT Bombay*

*



On Thu, Sep 27, 2012 at 8:13 AM, Sanjib Sikder <sanjibju2002@gmail.com>wrote:

> HI,
>
>
> (setq org-latex-to-pdf-process '("texi2dvi --pdf --clean --verbose --batch
> %f"))
>
> I have incorporated above line in my .emacs file. Now the C-c C-e p is not
> showing the error "Undefined citation" but the problem is still there. In
> place of refrences, I am getting questions marks.
>
> Thanks for your response.
>
>
> -----------------------------
> *Sanjib Sikder
> *Ph.D. Fellow
> Chemical Engineering
> IIT Bombay*
>
> *
>
>
>
> On Thu, Sep 27, 2012 at 12:08 AM, Thomas S. Dye <tsd@tsdye.com> wrote:
>
>> Aloha Sanjib Sikder,
>>
>> It looks like BibTeX hasn't processed your document.
>>
>> See the variable org-latex-to-pdf-process. By default I believe it just
>> calls pdflatex several times.  You can either insert a call to bibtex,
>> or use a script, like this:
>>
>> (setq org-latex-to-pdf-process '("texi2dvi --pdf --clean --verbose
>> --batch %f"))
>>
>> hth,
>> Tom
>>
>>
>> Sanjib Sikder <sanjibju2002@gmail.com> writes:
>>
>> > Hi,
>> >
>> > I tried the whole day trying the instructions through out various web
>> pages
>> > to have references in scientific document without any success.
>> >
>> > C-c C-e p produces the pdf file with question mark in place of
>> reference.
>> >
>> > I have attached four files.
>> >
>> > BibAbb1.bib is my bibliography file
>> > DOTemacs is the .emacs file
>> > TestSciDocu.org is the org file for scientific writing
>> > TestSciDocu.pdf is the output
>> >
>> >
>> > Please help me in geeting the citation correctly :(
>> >
>> > I am using emacs-snapshot on Ubuntu 12.04.
>> >
>> > Thanks
>> >
>> >
>> >
>> > -----------------------------
>> > *Sanjib Sikder
>> > *Ph.D. Fellow
>> > Chemical Engineering
>> > IIT Bombay*
>> >
>> > *
>> > Hi,I tried the whole day trying the instructions through out various
>> web pages to have references in scientific document without any success.C-c
>> C-e p produces the pdf file with question mark in place of reference.
>> >
>> >
>> > I have attached four files.BibAbb1.bib is my bibliography fileDOTemacs
>> is the .emacs fileTestSciDocu.org is the org file for scientific
>> writingTestSciDocu.pdf is the outputPlease help me in geeting the citation
>> correctly :(
>> >
>> >
>> > I am using emacs-snapshot on Ubuntu
>> 12.04.Thanks-----------------------------<span
>> style="color:rgb(102,102,102)">Sanjib Sikder</span><span
>> style="color:rgb(153,153,153)">Ph.D. Fellow
>> >
>> >
>> > Chemical EngineeringIIT Bombay</span>
>> >
>> >
>> >
>> >
>> >
>>
>> --
>> Thomas S. Dye
>> http://www.tsdye.com
>>
>
>

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  reply	other threads:[~2012-09-27  3:15 UTC|newest]

Thread overview: 10+ messages / expand[flat|nested]  mbox.gz  Atom feed  top
     [not found] <CAL1SgUp87tichwJhr25VpnVTwniH+ivvoxoaiL_9oqFR-Ugcgg@mail.gmail.com>
2012-09-26 17:00 ` Sanjib Sikder
2012-09-26 18:38   ` Thomas S. Dye
2012-09-27  2:43     ` Sanjib Sikder
2012-09-27  3:14       ` Sanjib Sikder [this message]
2012-09-27  3:46         ` Yagnesh Raghava Yakkala
2012-09-27  3:59           ` Sanjib Sikder
2012-09-27  5:16             ` Yagnesh Raghava Yakkala
2012-09-27  5:28           ` Nick Dokos
2012-10-03  7:04       ` Nick Dokos
2012-10-03  9:40         ` Sanjib Sikder

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