* Bug: Org table alignment, horrible failures [9.1.5 (9.1.5-1-gb3ddb0-elpaplus @ /Users/genovese/.emacs.d/elpa/org-plus-contrib-20171225/)]
@ 2018-01-02 4:01 Christopher Genovese
2018-01-02 4:14 ` John Kitchin
0 siblings, 1 reply; 2+ messages in thread
From: Christopher Genovese @ 2018-01-02 4:01 UTC (permalink / raw)
To: emacs-orgmode
[-- Attachment #1.1: Type: text/plain, Size: 10417 bytes --]
I make heavy use of org tables, often relying on the automatic realignment
with C-c C-c or TAB. But after updating org-mode to 9.1.5, this realignment
has started to lead to quite significant problems in the tables'
appearances.
I'm on Mac OS X 10.12.6, running Gnu Emacs 26.0.50 installed via homebrew.
I installed org-mode 9.1.5 using the org-plus-contrib package with the
standard
package mechanism.
I've run all these examples using emacs -Q with a minimal load of
org-plus-contrib (configuration #1 below) as well as my own set up
(configuration #2 below). Same results both ways.
I've attached images to this email to show the results, but I'll try to
reproduce them here as well in a fixed-width typeface.
Here is a sample table as a baseline, put in a file by itself.
| Date | Time | Aerobic |
Lifting | Strengthening |
Stretching | Other | Notes |
| 2017 01 01 | 1100 | True:34, Ladder:10, Bike:10 | Light biceps, light
forearms | Light Shoulders, Wrist | Calf, Hamstring, Groin | | |
With certain changes to these fields, automatic alignment of the columns
with either C-c C-c or TAB fails horribly in several ways. The baseline
table
image is align-Q-baseline.png.
1. Change Time column from 1100 to any alphanumeric string *that
includes a letter* and the alignment works as normal.
(Image: align-Q-baseline.png). Note that 1100 also keeps the alignment
normal (align-Q-equal-number.png) but only because it is the same length
as Time.
2. Change Time to a short number, like 11, and the table appears as
| Date | Time | Aerobic |
Lifting | Strengthening |
Stretching | Other | Notes |
| 2017 01 01 | T e 4 L der:10, Bike:10 | Light biceps, light forearms |
Light Shoulders, Wrist | Calf, Hamstring, Groin | | |
(Image: align-Q-short-number.png)
3. Change Time to a long number, like 111000, and the table appears as
| Date | m | e b | Lifting
| Strengthening | Stretching | Other | Notes |
| 2017 01 01 | 111000 | True:34, Ladder:10, Bike:10 | Light biceps, light
forearms | Light Shoulders, Wrist | Calf, Hamstring, Groin | | |
(Image: align-Q-long-number.png, similarly align-Q-confirm.png with
11000 instead.)
4. Change Date to include -'s (2017-01-01) and the table appears as
| Date | Time | Aerobic |
Lifting | Strengthening |
Stretching | Other | Notes |
| 2017-01-01 | 1100 | True:34, Ladder:10, Bike:10 | Light biceps, light
forearms | Light Shoulders, Wrist | Calf, Hamstring, Groin | | |
Other similar problems occur as well.
Again, these appear after either C-c C-c or a TAB in a field, nothing else.
The contents are not changed only the appearance and cannot
be fixed by editing. Killing the buffer and reopening makes the
table look correct, but any additional realignment messes it up again.
And just to be clear, this did not occur prior to installing 9.1.5,
even a few days back. I don't recall the previous version I had
installed. It was relatively recent but could have been a few
steps back.
Thanks, Chris
--------------------------------
Configuration #1:
Emacs : GNU Emacs 26.0.50 (build 1, x86_64-apple-darwin16.7.0, NS
appkit-1504.83 Version 10.12.6 (Build 16G29))
of 2017-08-29
Package: Org mode version 9.1.5 (9.1.5-1-gb3ddb0-elpaplus @
/Users/genovese/.emacs.d/elpa/org-plus-contrib-20171225/)
current state:
==============
(setq
org-src-mode-hook '(org-src-babel-configure-edit-buffer
org-src-mode-configure-edit-buffer)
org-after-todo-state-change-hook '(org-clock-out-if-current)
org-metadown-hook '(org-babel-pop-to-session-maybe)
org-clock-out-hook '(org-clock-remove-empty-clock-drawer)
org-mode-hook '(#[0 "\300\301\302\303\304$\207"
[add-hook change-major-mode-hook org-show-block-all append
local] 5]
#[0 "\300\301\302\303\304$\207"
[add-hook change-major-mode-hook org-babel-show-result-all
append local]
5]
org-babel-result-hide-spec org-babel-hide-all-hashes
org-eldoc-load)
org-archive-hook '(org-attach-archive-delete-maybe)
org-confirm-elisp-link-function 'yes-or-no-p
org-agenda-before-write-hook '(org-agenda-add-entry-text)
org-metaup-hook '(org-babel-load-in-session-maybe)
org-bibtex-headline-format-function #[257 "\300 \236A\207" [:title] 3
"\n\n(fn ENTRY)"]
Configuration #2:
Emacs : GNU Emacs 26.0.50 (build 1, x86_64-apple-darwin16.7.0, NS
appkit-1504.83 Version 10.12.6 (Build 16G29))
of 2017-08-29
Package: Org mode version 9.1.5 (9.1.5-1-gb3ddb0-elpaplus @
/Users/genovese/.emacs.d/elpa/org-plus-contrib-20171225/)
current state:
==============
(setq
org-src-mode-hook '(org-src-babel-configure-edit-buffer
org-src-mode-configure-edit-buffer)
org-after-todo-state-change-hook '(org-clock-out-if-current)
org-metadown-hook '(org-babel-pop-to-session-maybe)
org-clock-out-hook '(org-clock-remove-empty-clock-drawer)
org-archive-location "~/org/archive::"
org-mode-hook '(my-org-table-extensions turn-on-font-lock my/org-mode-hook
#[0 "\300\301\302\303\304$\207"
[add-hook change-major-mode-hook org-show-block-all
append local] 5]
#[0 "\300\301\302\303\304$\207"
[add-hook change-major-mode-hook
org-babel-show-result-all append local] 5]
org-babel-result-hide-spec org-babel-hide-all-hashes
org-eldoc-load)
org-archive-hook '(org-attach-archive-delete-maybe)
org-confirm-elisp-link-function 'yes-or-no-p
org-agenda-before-write-hook '(org-agenda-add-entry-text)
org-metaup-hook '(org-babel-load-in-session-maybe)
org-bibtex-headline-format-function #[257 "\300 \236A\207" [:title] 3
"\n\n(fn ENTRY)"]
org-babel-pre-tangle-hook '(save-buffer)
org-file-apps '((auto-mode . emacs) (directory . emacs) (system . "open
%s") ("\\.mm\\'" . default)
("\\.x?html?\\'" . system) ("\\.pdf\\'" . system)
("\\.\\(?:png\\|jpe?g\\|gif\\|tiff?\\|bmp\\)\\'" . system)
("\\`\\(?:.*/\\)?[^.]+\\'" . emacs))
org-tab-first-hook '(org-babel-hide-result-toggle-maybe
org-babel-header-arg-expand)
org-babel-load-languages '((emacs-lisp . t) (R . t) (python . t) (clojure
. t) (latex . t)
(lisp . t) (haskell . t) (C . t) (ruby . t)
(org . t) (css . t)
(sass . t) (dot . t) (java . t) (ocaml . t)
(calc . t) (ditaa . t)
(sql . t) (asymptote . t))
org-load-hook '(my/org-load-hook)
org-hide-emphasis-markers t
org-export-backends '(ascii beamer html icalendar latex md texinfo deck)
org-babel-python-command "python3"
org-occur-hook '(org-first-headline-recenter)
org-ditaa-jar-path "~/bin/ditaa.jar"
org-structure-template-alist '(("s" "#+begin_src ?\n\n#+end_src")
("e" "#+begin_example\n?\n#+end_example")
("q" "#+begin_quote\n?\n#+end_quote")
("v" "#+begin_verbatim\n?\n#+end_verbatim")
("V" "#+begin_verse\n?\n#+end_verse")
("c" "#+begin_center\n?\n#+end_center")
("l" "#+begin_latex\n?\n#+end_latex") ("L"
"#+LaTeX: ")
("h" "#+begin_html\n?\n#+end_html") ("H"
"#+HTML: ")
("a" "#+begin_ascii\n?\n#+end_ascii") ("A"
"#+ASCII: ")
("i" "#+INDEX: ?") ("I" "#+INCLUDE: %file
?"))
org-cycle-hook '(org-cycle-hide-archived-subtrees org-cycle-hide-drawers
org-cycle-show-empty-lines
org-optimize-window-after-visibility-change)
org-todo-keywords '((sequence "TODO" "WAIT" "DONE"))
org-speed-command-hook '(org-speed-command-activate
org-babel-speed-command-activate)
org-tags-column -116
org-babel-tangle-lang-exts '(("asymptote" . "asy") ("ocaml" . "ml")
("java" . "java")
("ruby" . "rb") ("D" . "d") ("C++" . "cpp")
("haskell" . "hs")
("lisp" . "lisp") ("latex" . "tex")
("clojure" . "clj")
("python" . "py") ("emacs-lisp" . "el")
("elisp" . "el"))
org-confirm-shell-link-function 'yes-or-no-p
org-link-parameters '(("id" :follow org-id-open)
("rmail" :follow org-rmail-open :store
org-rmail-store-link)
("mhe" :follow org-mhe-open :store
org-mhe-store-link)
("irc" :follow org-irc-visit :store
org-irc-store-link)
("info" :follow org-info-open :export
org-info-export :store
org-info-store-link)
("gnus" :follow org-gnus-open :store
org-gnus-store-link)
("docview" :follow org-docview-open :export
org-docview-export :store
org-docview-store-link)
("bibtex" :follow org-bibtex-open :store
org-bibtex-store-link)
("bbdb" :follow org-bbdb-open :export
org-bbdb-export :complete
org-bbdb-complete-link :store org-bbdb-store-link)
("w3m" :store org-w3m-store-link) ("file+sys")
("file+emacs")
("ipynb" :follow ein:org-open :help-echo "Open
ipython notebook." :store
ein:org-store-link)
("doi" :follow org--open-doi-link) ("elisp" :follow
org--open-elisp-link)
("file" :complete org-file-complete-link)
("ftp" :follow (lambda (path) (browse-url (concat
"ftp:" path))))
("help" :follow org--open-help-link)
("http" :follow (lambda (path) (browse-url (concat
"http:" path))))
("https" :follow (lambda (path) (browse-url (concat
"https:" path))))
("mailto" :follow (lambda (path) (browse-url (concat
"mailto:" path))))
("news" :follow (lambda (path) (browse-url (concat
"news:" path))))
("shell" :follow org--open-shell-link))
org-tag-faces '(("urgent" . font-lock-warning-face))
org-todo-keyword-faces '(("WAIT" . org-wait-face))
org-src-window-setup 'current-window
)
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[-- Attachment #5: align-Q-equal-number.png --]
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[-- Attachment #6: align-Q-confirm.png --]
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[-- Attachment #7: align-Q-date.png --]
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^ permalink raw reply [flat|nested] 2+ messages in thread
* Re: Bug: Org table alignment, horrible failures [9.1.5 (9.1.5-1-gb3ddb0-elpaplus @ /Users/genovese/.emacs.d/elpa/org-plus-contrib-20171225/)]
2018-01-02 4:01 Bug: Org table alignment, horrible failures [9.1.5 (9.1.5-1-gb3ddb0-elpaplus @ /Users/genovese/.emacs.d/elpa/org-plus-contrib-20171225/)] Christopher Genovese
@ 2018-01-02 4:14 ` John Kitchin
0 siblings, 0 replies; 2+ messages in thread
From: John Kitchin @ 2018-01-02 4:14 UTC (permalink / raw)
To: Christopher Genovese; +Cc: emacs-orgmode
[-- Attachment #1: Type: text/plain, Size: 11361 bytes --]
No answer, but something like this was also posted on SO:
https://emacs.stackexchange.com/questions/37828/org-mode-doesnt-align-column-bars-properly
John
-----------------------------------
Professor John Kitchin
Doherty Hall A207F
Department of Chemical Engineering
Carnegie Mellon University
Pittsburgh, PA 15213
412-268-7803
@johnkitchin
http://kitchingroup.cheme.cmu.edu
On Mon, Jan 1, 2018 at 8:01 PM, Christopher Genovese <genovese@cmu.edu>
wrote:
> I make heavy use of org tables, often relying on the automatic realignment
> with C-c C-c or TAB. But after updating org-mode to 9.1.5, this realignment
> has started to lead to quite significant problems in the tables'
> appearances.
> I'm on Mac OS X 10.12.6, running Gnu Emacs 26.0.50 installed via homebrew.
> I installed org-mode 9.1.5 using the org-plus-contrib package with the
> standard
> package mechanism.
>
> I've run all these examples using emacs -Q with a minimal load of
> org-plus-contrib (configuration #1 below) as well as my own set up
> (configuration #2 below). Same results both ways.
>
> I've attached images to this email to show the results, but I'll try to
> reproduce them here as well in a fixed-width typeface.
>
> Here is a sample table as a baseline, put in a file by itself.
>
> | Date | Time | Aerobic |
> Lifting | Strengthening |
> Stretching | Other | Notes |
> | 2017 01 01 | 1100 | True:34, Ladder:10, Bike:10 | Light biceps, light
> forearms | Light Shoulders, Wrist | Calf, Hamstring, Groin | | |
>
> With certain changes to these fields, automatic alignment of the columns
> with either C-c C-c or TAB fails horribly in several ways. The baseline
> table
> image is align-Q-baseline.png.
>
> 1. Change Time column from 1100 to any alphanumeric string *that
> includes a letter* and the alignment works as normal.
> (Image: align-Q-baseline.png). Note that 1100 also keeps the alignment
> normal (align-Q-equal-number.png) but only because it is the same length
> as Time.
>
> 2. Change Time to a short number, like 11, and the table appears as
>
> | Date | Time | Aerobic |
> Lifting | Strengthening |
> Stretching | Other | Notes |
> | 2017 01 01 | T e 4 L der:10, Bike:10 | Light biceps, light forearms
> | Light Shoulders, Wrist | Calf, Hamstring, Groin | | |
>
> (Image: align-Q-short-number.png)
>
> 3. Change Time to a long number, like 111000, and the table appears as
>
> | Date | m | e b |
> Lifting | Strengthening |
> Stretching | Other | Notes |
> | 2017 01 01 | 111000 | True:34, Ladder:10, Bike:10 | Light biceps, light
> forearms | Light Shoulders, Wrist | Calf, Hamstring, Groin | | |
>
> (Image: align-Q-long-number.png, similarly align-Q-confirm.png with
> 11000 instead.)
>
> 4. Change Date to include -'s (2017-01-01) and the table appears as
>
> | Date | Time | Aerobic |
> Lifting | Strengthening |
> Stretching | Other | Notes |
> | 2017-01-01 | 1100 | True:34, Ladder:10, Bike:10 | Light biceps, light
> forearms | Light Shoulders, Wrist | Calf, Hamstring, Groin | | |
>
> Other similar problems occur as well.
>
> Again, these appear after either C-c C-c or a TAB in a field, nothing else.
> The contents are not changed only the appearance and cannot
> be fixed by editing. Killing the buffer and reopening makes the
> table look correct, but any additional realignment messes it up again.
>
> And just to be clear, this did not occur prior to installing 9.1.5,
> even a few days back. I don't recall the previous version I had
> installed. It was relatively recent but could have been a few
> steps back.
>
> Thanks, Chris
>
> --------------------------------
> Configuration #1:
>
> Emacs : GNU Emacs 26.0.50 (build 1, x86_64-apple-darwin16.7.0, NS
> appkit-1504.83 Version 10.12.6 (Build 16G29))
> of 2017-08-29
> Package: Org mode version 9.1.5 (9.1.5-1-gb3ddb0-elpaplus @
> /Users/genovese/.emacs.d/elpa/org-plus-contrib-20171225/)
>
> current state:
> ==============
> (setq
> org-src-mode-hook '(org-src-babel-configure-edit-buffer
> org-src-mode-configure-edit-buffer)
> org-after-todo-state-change-hook '(org-clock-out-if-current)
> org-metadown-hook '(org-babel-pop-to-session-maybe)
> org-clock-out-hook '(org-clock-remove-empty-clock-drawer)
> org-mode-hook '(#[0 "\300\301\302\303\304$\207"
> [add-hook change-major-mode-hook org-show-block-all append
> local] 5]
> #[0 "\300\301\302\303\304$\207"
> [add-hook change-major-mode-hook org-babel-show-result-all
> append local]
> 5]
> org-babel-result-hide-spec org-babel-hide-all-hashes
> org-eldoc-load)
> org-archive-hook '(org-attach-archive-delete-maybe)
> org-confirm-elisp-link-function 'yes-or-no-p
> org-agenda-before-write-hook '(org-agenda-add-entry-text)
> org-metaup-hook '(org-babel-load-in-session-maybe)
> org-bibtex-headline-format-function #[257 "\300 \236A\207" [:title] 3
> "\n\n(fn ENTRY)"]
>
>
>
>
> Configuration #2:
>
> Emacs : GNU Emacs 26.0.50 (build 1, x86_64-apple-darwin16.7.0, NS
> appkit-1504.83 Version 10.12.6 (Build 16G29))
> of 2017-08-29
> Package: Org mode version 9.1.5 (9.1.5-1-gb3ddb0-elpaplus @
> /Users/genovese/.emacs.d/elpa/org-plus-contrib-20171225/)
>
> current state:
> ==============
> (setq
> org-src-mode-hook '(org-src-babel-configure-edit-buffer
> org-src-mode-configure-edit-buffer)
> org-after-todo-state-change-hook '(org-clock-out-if-current)
> org-metadown-hook '(org-babel-pop-to-session-maybe)
> org-clock-out-hook '(org-clock-remove-empty-clock-drawer)
> org-archive-location "~/org/archive::"
> org-mode-hook '(my-org-table-extensions turn-on-font-lock my/org-mode-hook
> #[0 "\300\301\302\303\304$\207"
> [add-hook change-major-mode-hook org-show-block-all
> append local] 5]
> #[0 "\300\301\302\303\304$\207"
> [add-hook change-major-mode-hook
> org-babel-show-result-all append local] 5]
> org-babel-result-hide-spec org-babel-hide-all-hashes
> org-eldoc-load)
> org-archive-hook '(org-attach-archive-delete-maybe)
> org-confirm-elisp-link-function 'yes-or-no-p
> org-agenda-before-write-hook '(org-agenda-add-entry-text)
> org-metaup-hook '(org-babel-load-in-session-maybe)
> org-bibtex-headline-format-function #[257 "\300 \236A\207" [:title] 3
> "\n\n(fn ENTRY)"]
> org-babel-pre-tangle-hook '(save-buffer)
> org-file-apps '((auto-mode . emacs) (directory . emacs) (system . "open
> %s") ("\\.mm\\'" . default)
> ("\\.x?html?\\'" . system) ("\\.pdf\\'" . system)
> ("\\.\\(?:png\\|jpe?g\\|gif\\|tiff?\\|bmp\\)\\'" .
> system)
> ("\\`\\(?:.*/\\)?[^.]+\\'" . emacs))
> org-tab-first-hook '(org-babel-hide-result-toggle-maybe
> org-babel-header-arg-expand)
> org-babel-load-languages '((emacs-lisp . t) (R . t) (python . t) (clojure
> . t) (latex . t)
> (lisp . t) (haskell . t) (C . t) (ruby . t)
> (org . t) (css . t)
> (sass . t) (dot . t) (java . t) (ocaml . t)
> (calc . t) (ditaa . t)
> (sql . t) (asymptote . t))
> org-load-hook '(my/org-load-hook)
> org-hide-emphasis-markers t
> org-export-backends '(ascii beamer html icalendar latex md texinfo deck)
> org-babel-python-command "python3"
> org-occur-hook '(org-first-headline-recenter)
> org-ditaa-jar-path "~/bin/ditaa.jar"
> org-structure-template-alist '(("s" "#+begin_src ?\n\n#+end_src")
> ("e" "#+begin_example\n?\n#+end_example")
> ("q" "#+begin_quote\n?\n#+end_quote")
> ("v" "#+begin_verbatim\n?\n#+end_
> verbatim")
> ("V" "#+begin_verse\n?\n#+end_verse")
> ("c" "#+begin_center\n?\n#+end_center")
> ("l" "#+begin_latex\n?\n#+end_latex")
> ("L" "#+LaTeX: ")
> ("h" "#+begin_html\n?\n#+end_html") ("H"
> "#+HTML: ")
> ("a" "#+begin_ascii\n?\n#+end_ascii")
> ("A" "#+ASCII: ")
> ("i" "#+INDEX: ?") ("I" "#+INCLUDE: %file
> ?"))
> org-cycle-hook '(org-cycle-hide-archived-subtrees org-cycle-hide-drawers
> org-cycle-show-empty-lines
> org-optimize-window-after-visibility-change)
> org-todo-keywords '((sequence "TODO" "WAIT" "DONE"))
> org-speed-command-hook '(org-speed-command-activate
> org-babel-speed-command-activate)
> org-tags-column -116
> org-babel-tangle-lang-exts '(("asymptote" . "asy") ("ocaml" . "ml")
> ("java" . "java")
> ("ruby" . "rb") ("D" . "d") ("C++" . "cpp")
> ("haskell" . "hs")
> ("lisp" . "lisp") ("latex" . "tex")
> ("clojure" . "clj")
> ("python" . "py") ("emacs-lisp" . "el")
> ("elisp" . "el"))
> org-confirm-shell-link-function 'yes-or-no-p
> org-link-parameters '(("id" :follow org-id-open)
> ("rmail" :follow org-rmail-open :store
> org-rmail-store-link)
> ("mhe" :follow org-mhe-open :store
> org-mhe-store-link)
> ("irc" :follow org-irc-visit :store
> org-irc-store-link)
> ("info" :follow org-info-open :export
> org-info-export :store
> org-info-store-link)
> ("gnus" :follow org-gnus-open :store
> org-gnus-store-link)
> ("docview" :follow org-docview-open :export
> org-docview-export :store
> org-docview-store-link)
> ("bibtex" :follow org-bibtex-open :store
> org-bibtex-store-link)
> ("bbdb" :follow org-bbdb-open :export
> org-bbdb-export :complete
> org-bbdb-complete-link :store org-bbdb-store-link)
> ("w3m" :store org-w3m-store-link) ("file+sys")
> ("file+emacs")
> ("ipynb" :follow ein:org-open :help-echo "Open
> ipython notebook." :store
> ein:org-store-link)
> ("doi" :follow org--open-doi-link) ("elisp" :follow
> org--open-elisp-link)
> ("file" :complete org-file-complete-link)
> ("ftp" :follow (lambda (path) (browse-url (concat
> "ftp:" path))))
> ("help" :follow org--open-help-link)
> ("http" :follow (lambda (path) (browse-url (concat
> "http:" path))))
> ("https" :follow (lambda (path) (browse-url (concat
> "https:" path))))
> ("mailto" :follow (lambda (path) (browse-url
> (concat "mailto:" path))))
> ("news" :follow (lambda (path) (browse-url (concat
> "news:" path))))
> ("shell" :follow org--open-shell-link))
> org-tag-faces '(("urgent" . font-lock-warning-face))
> org-todo-keyword-faces '(("WAIT" . org-wait-face))
> org-src-window-setup 'current-window
> )
>
>
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2018-01-02 4:01 Bug: Org table alignment, horrible failures [9.1.5 (9.1.5-1-gb3ddb0-elpaplus @ /Users/genovese/.emacs.d/elpa/org-plus-contrib-20171225/)] Christopher Genovese
2018-01-02 4:14 ` John Kitchin
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