* interesting dilemma with ob-ipython
@ 2016-06-09 21:33 John Kitchin
2016-06-09 21:42 ` Ken Mankoff
2016-06-09 21:47 ` Anthony Cowley
0 siblings, 2 replies; 5+ messages in thread
From: John Kitchin @ 2016-06-09 21:33 UTC (permalink / raw)
To: emacs-orgmode@gnu.org
I was looking into ob-ipython as a replacement for regular
org-babel-python because it seems to be better at sessions. Also, you
can use other kernels with it!
For example:
#+BEGIN_SRC ipython :session hy :results output :kernel hy
(print "hello world")
(import time)
(print (time.asctime))
#+END_SRC
#+RESULTS:
: hello world
: Thu Jun 9 17:26:56 2016
Here is the dilemma:
If I special edit this, it is in python-mode, not hy-mode. And similarly
on export, it is highlighted as ipython, not hy-lang.
Any thoughts on how to address these?
--
Professor John Kitchin
Doherty Hall A207F
Department of Chemical Engineering
Carnegie Mellon University
Pittsburgh, PA 15213
412-268-7803
@johnkitchin
http://kitchingroup.cheme.cmu.edu
^ permalink raw reply [flat|nested] 5+ messages in thread
* Re: interesting dilemma with ob-ipython
2016-06-09 21:33 interesting dilemma with ob-ipython John Kitchin
@ 2016-06-09 21:42 ` Ken Mankoff
2016-06-09 21:47 ` Anthony Cowley
1 sibling, 0 replies; 5+ messages in thread
From: Ken Mankoff @ 2016-06-09 21:42 UTC (permalink / raw)
To: John Kitchin; +Cc: emacs-orgmode@gnu.org
Hi John,
On 2016-06-09 at 23:33, John Kitchin <jkitchin@andrew.cmu.edu> wrote:
> I was looking into ob-ipython as a replacement for regular
> org-babel-python [...]
>
> Here is the dilemma:
> If I special edit this, it is in python-mode, not hy-mode. And similarly
> on export, it is highlighted as ipython, not hy-lang.
>
> Any thoughts on how to address these?
I'm not lispy enough to implement this, but I have an idea where you might start. See:
https://lists.gnu.org/archive/html/emacs-orgmode/2015-08/msg00594.html
Which is a thread which discussed (and provided an implementation for) named python sessions. Specifically, it uses the ":session foo" variable to modify the name of the special-edit buffer. Genercially, it uses something from the Babel header to modify something about special edit buffer, which is what I think you want to do.
Good luck,
-k.
^ permalink raw reply [flat|nested] 5+ messages in thread
* Re: interesting dilemma with ob-ipython
2016-06-09 21:33 interesting dilemma with ob-ipython John Kitchin
2016-06-09 21:42 ` Ken Mankoff
@ 2016-06-09 21:47 ` Anthony Cowley
2016-06-10 14:19 ` John Kitchin
1 sibling, 1 reply; 5+ messages in thread
From: Anthony Cowley @ 2016-06-09 21:47 UTC (permalink / raw)
To: John Kitchin; +Cc: emacs-orgmode@gnu.org
John Kitchin writes:
> I was looking into ob-ipython as a replacement for regular
> org-babel-python because it seems to be better at sessions. Also, you
> can use other kernels with it!
>
> For example:
>
> #+BEGIN_SRC ipython :session hy :results output :kernel hy
> (print "hello world")
> (import time)
> (print (time.asctime))
> #+END_SRC
>
> #+RESULTS:
> : hello world
> : Thu Jun 9 17:26:56 2016
>
> Here is the dilemma:
> If I special edit this, it is in python-mode, not hy-mode. And similarly
> on export, it is highlighted as ipython, not hy-lang.
>
> Any thoughts on how to address these?
I've had success using something like this,
(add-to-list 'org-src-lang-modes '("ipython" . haskell))
in a :noexport: setup section.
Anthony
^ permalink raw reply [flat|nested] 5+ messages in thread* Re: interesting dilemma with ob-ipython
2016-06-09 21:47 ` Anthony Cowley
@ 2016-06-10 14:19 ` John Kitchin
2016-06-29 2:25 ` Ista Zahn
0 siblings, 1 reply; 5+ messages in thread
From: John Kitchin @ 2016-06-10 14:19 UTC (permalink / raw)
To: Anthony Cowley; +Cc: emacs-orgmode@gnu.org
Thanks for this tip. It was a great start! I turned it into this:
#+BEGIN_SRC emacs-lisp
;; make src blocks open in the right mode
(add-to-list 'org-src-lang-modes '("jupyter-hy" . hy))
(add-to-list 'org-latex-minted-langs '(jupyter-hy "hylang"))
;; set default headers for convenience
(setq org-babel-default-header-args:jupyter-hy
'((:results . "output replace")
(:session . "hy")
(:kernel . "hy")
(:exports . "code")
(:cache . "no")
(:noweb . "no")
(:hlines . "no")
(:tangle . "no")))
(defalias 'org-babel-execute:jupyter-hy 'org-babel-execute:ipython)
(add-to-list 'org-structure-template-alist
'("hy" "#+BEGIN_SRC jupyter-hy\n?\n#+END_SRC"
"<src lang=\"hy\">\n?\n</src>"))
#+END_SRC
Which solves all the problems!
1. src-blocks open in hy-mode and export as hylang in minted.
2. <hy expands nicely to the jupyter block with default settings.
3. C-c C-c runs the block using the hy jupyter kernel.
Fantastic. Thanks!
Anthony Cowley writes:
> John Kitchin writes:
>
>> I was looking into ob-ipython as a replacement for regular
>> org-babel-python because it seems to be better at sessions. Also, you
>> can use other kernels with it!
>>
>> For example:
>>
>> #+BEGIN_SRC ipython :session hy :results output :kernel hy
>> (print "hello world")
>> (import time)
>> (print (time.asctime))
>> #+END_SRC
>>
>> #+RESULTS:
>> : hello world
>> : Thu Jun 9 17:26:56 2016
>>
>> Here is the dilemma:
>> If I special edit this, it is in python-mode, not hy-mode. And similarly
>> on export, it is highlighted as ipython, not hy-lang.
>>
>> Any thoughts on how to address these?
>
> I've had success using something like this,
>
> (add-to-list 'org-src-lang-modes '("ipython" . haskell))
>
> in a :noexport: setup section.
>
> Anthony
--
Professor John Kitchin
Doherty Hall A207F
Department of Chemical Engineering
Carnegie Mellon University
Pittsburgh, PA 15213
412-268-7803
@johnkitchin
http://kitchingroup.cheme.cmu.edu
^ permalink raw reply [flat|nested] 5+ messages in thread* Re: interesting dilemma with ob-ipython
2016-06-10 14:19 ` John Kitchin
@ 2016-06-29 2:25 ` Ista Zahn
0 siblings, 0 replies; 5+ messages in thread
From: Ista Zahn @ 2016-06-29 2:25 UTC (permalink / raw)
To: emacs-orgmode@gnu.org
On Fri, Jun 10, 2016 at 10:19 AM, John Kitchin <jkitchin@andrew.cmu.edu> wrote:
> Thanks for this tip. It was a great start! I turned it into this:
>
> #+BEGIN_SRC emacs-lisp
> ;; make src blocks open in the right mode
> (add-to-list 'org-src-lang-modes '("jupyter-hy" . hy))
> (add-to-list 'org-latex-minted-langs '(jupyter-hy "hylang"))
>
> ;; set default headers for convenience
> (setq org-babel-default-header-args:jupyter-hy
> '((:results . "output replace")
> (:session . "hy")
> (:kernel . "hy")
> (:exports . "code")
> (:cache . "no")
> (:noweb . "no")
> (:hlines . "no")
> (:tangle . "no")))
>
> (defalias 'org-babel-execute:jupyter-hy 'org-babel-execute:ipython)
>
> (add-to-list 'org-structure-template-alist
> '("hy" "#+BEGIN_SRC jupyter-hy\n?\n#+END_SRC"
> "<src lang=\"hy\">\n?\n</src>"))
> #+END_SRC
>
> Which solves all the problems!
> 1. src-blocks open in hy-mode and export as hylang in minted.
> 2. <hy expands nicely to the jupyter block with default settings.
> 3. C-c C-c runs the block using the hy jupyter kernel.
I worked up some code to do this for all installed jupyter kernels.
It's kind of rough (my elisp is not so good) by I submitted it as a
pull request at https://github.com/gregsexton/ob-ipython/pull/74. I
would appreciate any feedback or suggestions for improvement.
--Ista
>
> Fantastic. Thanks!
>
>
> Anthony Cowley writes:
>
>> John Kitchin writes:
>>
>>> I was looking into ob-ipython as a replacement for regular
>>> org-babel-python because it seems to be better at sessions. Also, you
>>> can use other kernels with it!
>>>
>>> For example:
>>>
>>> #+BEGIN_SRC ipython :session hy :results output :kernel hy
>>> (print "hello world")
>>> (import time)
>>> (print (time.asctime))
>>> #+END_SRC
>>>
>>> #+RESULTS:
>>> : hello world
>>> : Thu Jun 9 17:26:56 2016
>>>
>>> Here is the dilemma:
>>> If I special edit this, it is in python-mode, not hy-mode. And similarly
>>> on export, it is highlighted as ipython, not hy-lang.
>>>
>>> Any thoughts on how to address these?
>>
>> I've had success using something like this,
>>
>> (add-to-list 'org-src-lang-modes '("ipython" . haskell))
>>
>> in a :noexport: setup section.
>>
>> Anthony
>
>
> --
> Professor John Kitchin
> Doherty Hall A207F
> Department of Chemical Engineering
> Carnegie Mellon University
> Pittsburgh, PA 15213
> 412-268-7803
> @johnkitchin
> http://kitchingroup.cheme.cmu.edu
>
^ permalink raw reply [flat|nested] 5+ messages in thread
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2016-06-09 21:33 interesting dilemma with ob-ipython John Kitchin
2016-06-09 21:42 ` Ken Mankoff
2016-06-09 21:47 ` Anthony Cowley
2016-06-10 14:19 ` John Kitchin
2016-06-29 2:25 ` Ista Zahn
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