* inline src_R also in latex src block
@ 2011-12-30 18:13 Michael Bach
2012-01-02 17:49 ` Eric Schulte
0 siblings, 1 reply; 9+ messages in thread
From: Michael Bach @ 2011-12-30 18:13 UTC (permalink / raw)
To: emacs-orgmode
Hello,
I am using org-mode version 7.8.02
I can successfully do inline `src_R' e.g. via
--8<---------------cut here---------------start------------->8---
\begin{equation}
src_R{4 + 4}
\end{equation}
--8<---------------cut here---------------end--------------->8---
where `8' is put into the equation environment on export. Sadly, there
is no LaTeX font lock in the org file this way. But when I do it inside
a latex src block providing font lock, e.g.
--8<---------------cut here---------------start------------->8---
#+name: test
#+begin_src latex
\begin{equation}
src_R{4 + 4}
\end{equation}
#+end_src
--8<---------------cut here---------------end--------------->8---
the `src_R' is put in literally on latex export.
Is there a way of preprocessing this latex src block with babel for R
prior to exporting?
Thanks in advance,
Michael
^ permalink raw reply [flat|nested] 9+ messages in thread* Re: inline src_R also in latex src block
2011-12-30 18:13 inline src_R also in latex src block Michael Bach
@ 2012-01-02 17:49 ` Eric Schulte
2012-01-10 12:25 ` Michael Bach
0 siblings, 1 reply; 9+ messages in thread
From: Eric Schulte @ 2012-01-02 17:49 UTC (permalink / raw)
To: Michael Bach; +Cc: emacs-orgmode
Michael Bach <phaebz@gmail.com> writes:
> Hello,
>
> I am using org-mode version 7.8.02
>
> I can successfully do inline `src_R' e.g. via
>
> \begin{equation}
> src_R{4 + 4}
> \end{equation}
>
> where `8' is put into the equation environment on export. Sadly, there
> is no LaTeX font lock in the org file this way. But when I do it inside
> a latex src block providing font lock, e.g.
>
> #+name: test
> #+begin_src latex
> \begin{equation}
> src_R{4 + 4}
> \end{equation}
> #+end_src
>
> the `src_R' is put in literally on latex export.
>
> Is there a way of preprocessing this latex src block with babel for R
> prior to exporting?
>
I don't know of a way to evaluate inline code blocks which are already
inside of regular code blocks. You could try direct begin_latex code
blocks, but in-buffer font lock support may simply not be possible in
this situation.
Best,
>
> Thanks in advance,
> Michael
>
>
--
Eric Schulte
http://cs.unm.edu/~eschulte/
^ permalink raw reply [flat|nested] 9+ messages in thread* Re: inline src_R also in latex src block
2012-01-02 17:49 ` Eric Schulte
@ 2012-01-10 12:25 ` Michael Bach
2012-01-10 13:00 ` Andreas Leha
0 siblings, 1 reply; 9+ messages in thread
From: Michael Bach @ 2012-01-10 12:25 UTC (permalink / raw)
To: Eric Schulte; +Cc: emacs-orgmode
Eric Schulte <eric.schulte@gmx.com> writes:
> I don't know of a way to evaluate inline code blocks which are already
> inside of regular code blocks.
Thanks for your thoughts on this, Eric. This would be *really*
convenient for me. Too bad the christmas wishlist was processed
already.
> You could try direct begin_latex code blocks, but in-buffer font lock
> support may simply not be possible in this situation.
>
Sadly, direct begin_latex code blocks get fontified with `org-block' and
also export the inline `src_R' snippets literally.
What I was looking for is latex code fontified as AUCTeX and inline
`src_R' snippets evaluated prior to exporting. The only working
combination I got right now is inline `src_R' evaluation and no AUCTeX
font-lock. This is only a minor itch and not too bad considering what
org-mode already does for me.
Best Regards,
Michael
^ permalink raw reply [flat|nested] 9+ messages in thread
* Re: inline src_R also in latex src block
2012-01-10 12:25 ` Michael Bach
@ 2012-01-10 13:00 ` Andreas Leha
2012-01-10 23:25 ` Michael Bach
0 siblings, 1 reply; 9+ messages in thread
From: Andreas Leha @ 2012-01-10 13:00 UTC (permalink / raw)
To: emacs-orgmode
Michael Bach <phaebz@gmail.com> writes:
> Eric Schulte <eric.schulte@gmx.com> writes:
>
>
>> I don't know of a way to evaluate inline code blocks which are already
>> inside of regular code blocks.
>
> Thanks for your thoughts on this, Eric. This would be *really*
> convenient for me. Too bad the christmas wishlist was processed
> already.
>
>> You could try direct begin_latex code blocks, but in-buffer font lock
>> support may simply not be possible in this situation.
>>
>
> Sadly, direct begin_latex code blocks get fontified with `org-block' and
> also export the inline `src_R' snippets literally.
>
> What I was looking for is latex code fontified as AUCTeX and inline
> `src_R' snippets evaluated prior to exporting. The only working
> combination I got right now is inline `src_R' evaluation and no AUCTeX
> font-lock. This is only a minor itch and not too bad considering what
> org-mode already does for me.
>
> Best Regards,
> Michael
Hi Michael,
would this noweb-based approach work for you:
#+name: inner_test
#+begin_src R
4 + 4
#+end_src
#+name: test
#+begin_src latex :noweb yes
\begin{equation}
<<inner_test()>>
\end{equation}
#+end_src
Cheers,
Andreas
^ permalink raw reply [flat|nested] 9+ messages in thread* Re: inline src_R also in latex src block
2012-01-10 13:00 ` Andreas Leha
@ 2012-01-10 23:25 ` Michael Bach
2012-01-11 7:54 ` Sebastien Vauban
2012-01-11 8:41 ` Andreas Leha
0 siblings, 2 replies; 9+ messages in thread
From: Michael Bach @ 2012-01-10 23:25 UTC (permalink / raw)
To: Andreas Leha; +Cc: emacs-orgmode
Andreas Leha <andreas.leha@med.uni-goettingen.de> writes:
> would this noweb-based approach work for you:
>
> #+name: inner_test
> #+begin_src R
> 4 + 4
> #+end_src
>
> #+name: test
> #+begin_src latex :noweb yes
> \begin{equation}
> <<inner_test()>>
> \end{equation}
> #+end_src
>
Yes, that works. Thanks for your thoughts on this, Andreas.
I am just thinking of another benefit: Is it correct that I can use
caching with this approach? So that the call to <<inner_test()>> does
not evaluate the `inner_test' block but instead takes its results
directly from the cached `#+results[6099...]: inner_test' block? This
would be speedier than src_R usage...
^ permalink raw reply [flat|nested] 9+ messages in thread* Re: inline src_R also in latex src block
2012-01-10 23:25 ` Michael Bach
@ 2012-01-11 7:54 ` Sebastien Vauban
2012-01-12 11:57 ` Michael Bach
2012-01-11 8:41 ` Andreas Leha
1 sibling, 1 reply; 9+ messages in thread
From: Sebastien Vauban @ 2012-01-11 7:54 UTC (permalink / raw)
To: emacs-orgmode-mXXj517/zsQ
Hi Michael,
Michael Bach wrote:
> Andreas Leha <andreas.leha-A1rZ2h3LdSKGMSlLMZIubhS11BummzK+@public.gmane.org> writes:
>
>> would this noweb-based approach work for you:
>>
>> #+name: inner_test
>> #+begin_src R
>> 4 + 4
>> #+end_src
>>
>> #+name: test
>> #+begin_src latex :noweb yes
>> \begin{equation}
>> <<inner_test()>>
>> \end{equation}
>> #+end_src
>
> Yes, that works. Thanks for your thoughts on this, Andreas.
>
> I am just thinking of another benefit: Is it correct that I can use caching
> with this approach? So that the call to <<inner_test()>> does not evaluate
> the `inner_test' block but instead takes its results directly from the
> cached `#+results[6099...]: inner_test' block? This would be speedier than
> src_R usage...
That's perfectly correct: as long as your input code block does not change
(options on the "meta" line and/or contents), your results will be taken "as
is", instead of being recomputed every time.
Best regards,
Seb
--
Sebastien Vauban
^ permalink raw reply [flat|nested] 9+ messages in thread* Re: inline src_R also in latex src block
2012-01-11 7:54 ` Sebastien Vauban
@ 2012-01-12 11:57 ` Michael Bach
0 siblings, 0 replies; 9+ messages in thread
From: Michael Bach @ 2012-01-12 11:57 UTC (permalink / raw)
To: Sebastien Vauban; +Cc: public-emacs-orgmode-mXXj517/zsQ
"Sebastien Vauban"
<wxhgmqzgwmuf-geNee64TY+gS+FvcfC7Uqw@public.gmane.org> writes:
> That's perfectly correct: as long as your input code block does not change
> (options on the "meta" line and/or contents), your results will be taken "as
> is", instead of being recomputed every time.
Very nice, Thanks for confirmation!
Michael
^ permalink raw reply [flat|nested] 9+ messages in thread
* Re: inline src_R also in latex src block
2012-01-10 23:25 ` Michael Bach
2012-01-11 7:54 ` Sebastien Vauban
@ 2012-01-11 8:41 ` Andreas Leha
2012-01-12 12:00 ` Michael Bach
1 sibling, 1 reply; 9+ messages in thread
From: Andreas Leha @ 2012-01-11 8:41 UTC (permalink / raw)
To: emacs-orgmode
Michael Bach <phaebz@gmail.com> writes:
> Andreas Leha <andreas.leha@med.uni-goettingen.de> writes:
>
>> would this noweb-based approach work for you:
>>
>> #+name: inner_test
>> #+begin_src R
>> 4 + 4
>> #+end_src
>>
>> #+name: test
>> #+begin_src latex :noweb yes
>> \begin{equation}
>> <<inner_test()>>
>> \end{equation}
>> #+end_src
>>
>
> Yes, that works. Thanks for your thoughts on this, Andreas.
>
> I am just thinking of another benefit: Is it correct that I can use
> caching with this approach? So that the call to <<inner_test()>> does
> not evaluate the `inner_test' block but instead takes its results
> directly from the cached `#+results[6099...]: inner_test' block? This
> would be speedier than src_R usage...
yes, that should work. Try to export the following several times. The
first number should not change.
(note: maybe you'd have to execute the inner_test_cached once on your
system)
#+name: inner_test_cached
#+begin_src R :cache yes :exports none
rnorm(1)
#+end_src
#+results[dbeb7280be41fdc949815808cf601a6d01a400bb]: inner_test_cached
: 1.12399967834262
#+name: inner_test_not_cached
#+begin_src R :exports none
rnorm(1)
#+end_src
#+results: inner_test_not_cached
: -0.562660468468834
#+name: test
#+begin_src latex :noweb yes
\begin{equation}
<<inner_test_cached()>>
!=
<<inner_test_not_cached()>>
\end{equation}
#+end_src
Cheers,
Andreas
^ permalink raw reply [flat|nested] 9+ messages in thread* Re: inline src_R also in latex src block
2012-01-11 8:41 ` Andreas Leha
@ 2012-01-12 12:00 ` Michael Bach
0 siblings, 0 replies; 9+ messages in thread
From: Michael Bach @ 2012-01-12 12:00 UTC (permalink / raw)
To: Andreas Leha; +Cc: emacs-orgmode
Andreas Leha <andreas.leha@med.uni-goettingen.de> writes:
> yes, that should work. Try to export the following several times. The
> first number should not change.
> (note: maybe you'd have to execute the inner_test_cached once on your
> system)
>
> #+name: inner_test_cached
> #+begin_src R :cache yes :exports none
> rnorm(1)
> #+end_src
>
> #+results[dbeb7280be41fdc949815808cf601a6d01a400bb]: inner_test_cached
> : 1.12399967834262
>
> #+name: inner_test_not_cached
> #+begin_src R :exports none
> rnorm(1)
> #+end_src
>
> #+results: inner_test_not_cached
> : -0.562660468468834
> #+name: test
> #+begin_src latex :noweb yes
> \begin{equation}
> <<inner_test_cached()>>
> !=
> <<inner_test_not_cached()>>
> \end{equation}
> #+end_src
Thanks for the testing code. Having R and LaTeX inside org this way is
just pure fun.
Michael
^ permalink raw reply [flat|nested] 9+ messages in thread
end of thread, other threads:[~2012-01-12 11:58 UTC | newest]
Thread overview: 9+ messages (download: mbox.gz / follow: Atom feed)
-- links below jump to the message on this page --
2011-12-30 18:13 inline src_R also in latex src block Michael Bach
2012-01-02 17:49 ` Eric Schulte
2012-01-10 12:25 ` Michael Bach
2012-01-10 13:00 ` Andreas Leha
2012-01-10 23:25 ` Michael Bach
2012-01-11 7:54 ` Sebastien Vauban
2012-01-12 11:57 ` Michael Bach
2012-01-11 8:41 ` Andreas Leha
2012-01-12 12:00 ` Michael Bach
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