* change in calling remote code blocks?
@ 2018-01-15 18:07 John Kitchin
2018-01-15 22:49 ` Nicolas Goaziou
0 siblings, 1 reply; 7+ messages in thread
From: John Kitchin @ 2018-01-15 18:07 UTC (permalink / raw)
To: emacs-orgmode
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In org8 I used to be able to call remote code blocks (
http://kitchingroup.cheme.cmu.edu/blog/2016/02/09/Calling-remote-code-blocks-in-org-mode/
)
with a syntax like:
#+call: si.org:figure-1() :wrap html
And C-c C-c on that line would call a code block named figure-1 in the file
si.org and insert the results.
in org 9.1.6, this does nothing. Does anyone know if this got changed, and
if there is a new way to do that?
John
-----------------------------------
Professor John Kitchin
Doherty Hall A207F
Department of Chemical Engineering
Carnegie Mellon University
Pittsburgh, PA 15213
412-268-7803
@johnkitchin
http://kitchingroup.cheme.cmu.edu
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^ permalink raw reply [flat|nested] 7+ messages in thread
* Re: change in calling remote code blocks?
2018-01-15 18:07 change in calling remote code blocks? John Kitchin
@ 2018-01-15 22:49 ` Nicolas Goaziou
2018-01-16 0:08 ` John Kitchin
0 siblings, 1 reply; 7+ messages in thread
From: Nicolas Goaziou @ 2018-01-15 22:49 UTC (permalink / raw)
To: John Kitchin; +Cc: emacs-orgmode
Hello,
John Kitchin <jkitchin@andrew.cmu.edu> writes:
> In org8 I used to be able to call remote code blocks (
> http://kitchingroup.cheme.cmu.edu/blog/2016/02/09/Calling-remote-code-blocks-in-org-mode/
> )
>
> with a syntax like:
>
> #+call: si.org:figure-1() :wrap html
>
> And C-c C-c on that line would call a code block named figure-1 in the file
> si.org and insert the results.
>
> in org 9.1.6, this does nothing. Does anyone know if this got changed, and
> if there is a new way to do that?
This sounds like a bug.
It does ring a bell. However, I couldn't find any reference to this
syntax or behaviour in the manual. Am I missing something?
Regards,
--
Nicolas Goaziou
^ permalink raw reply [flat|nested] 7+ messages in thread
* Re: change in calling remote code blocks?
2018-01-15 22:49 ` Nicolas Goaziou
@ 2018-01-16 0:08 ` John Kitchin
2018-01-22 18:44 ` Nicolas Goaziou
0 siblings, 1 reply; 7+ messages in thread
From: John Kitchin @ 2018-01-16 0:08 UTC (permalink / raw)
To: Nicolas Goaziou; +Cc: emacs-orgmode
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I don't recall how I learned about that, I guess maybe in some library of
babel documentation somewhere. I confirmed it does work in 8.2.10, e.g.
just with emacs -Q.
There are a few changes in org 9 to org-babel-lob-execute-maybe
and org-babel-lob-get-info that seem to be the root cause of the change.
Notably, org-babel-lob-get-info now returns nil where it used to return the
"path" to the file and block.
So, if I put this into an org file
(progn
(re-search-forward "call")
(message "%s" (org-babel-lob-get-info))) ;<- execute here
#+call: remote-call.org:test-block()
These get returned
In 8.2.10: "(remote-call.org:test-block() nil 0 nil)"
In 9.1.6: "nil"
I am not sure what all the differences are, but it seems to be where the
change in behavior came from.
John
-----------------------------------
Professor John Kitchin
Doherty Hall A207F
Department of Chemical Engineering
Carnegie Mellon University
Pittsburgh, PA 15213
412-268-7803
@johnkitchin
http://kitchingroup.cheme.cmu.edu
On Mon, Jan 15, 2018 at 2:49 PM, Nicolas Goaziou <mail@nicolasgoaziou.fr>
wrote:
> Hello,
>
> John Kitchin <jkitchin@andrew.cmu.edu> writes:
>
> > In org8 I used to be able to call remote code blocks (
> > http://kitchingroup.cheme.cmu.edu/blog/2016/02/09/Calling-
> remote-code-blocks-in-org-mode/
> > )
> >
> > with a syntax like:
> >
> > #+call: si.org:figure-1() :wrap html
> >
> > And C-c C-c on that line would call a code block named figure-1 in the
> file
> > si.org and insert the results.
> >
> > in org 9.1.6, this does nothing. Does anyone know if this got changed,
> and
> > if there is a new way to do that?
>
> This sounds like a bug.
>
> It does ring a bell. However, I couldn't find any reference to this
> syntax or behaviour in the manual. Am I missing something?
>
> Regards,
>
> --
> Nicolas Goaziou
>
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^ permalink raw reply [flat|nested] 7+ messages in thread
* Re: change in calling remote code blocks?
2018-01-16 0:08 ` John Kitchin
@ 2018-01-22 18:44 ` Nicolas Goaziou
2018-01-22 19:24 ` Nicolas Goaziou
0 siblings, 1 reply; 7+ messages in thread
From: Nicolas Goaziou @ 2018-01-22 18:44 UTC (permalink / raw)
To: John Kitchin; +Cc: emacs-orgmode
Hello,
John Kitchin <jkitchin@andrew.cmu.edu> writes:
> I don't recall how I learned about that, I guess maybe in some library of
> babel documentation somewhere. I confirmed it does work in 8.2.10, e.g.
> just with emacs -Q.
>
> There are a few changes in org 9 to org-babel-lob-execute-maybe
> and org-babel-lob-get-info that seem to be the root cause of the change.
> Notably, org-babel-lob-get-info now returns nil where it used to return the
> "path" to the file and block.
>
> So, if I put this into an org file
>
> (progn
> (re-search-forward "call")
> (message "%s" (org-babel-lob-get-info))) ;<- execute here
>
> #+call: remote-call.org:test-block()
>
> These get returned
>
> In 8.2.10: "(remote-call.org:test-block() nil 0 nil)"
> In 9.1.6: "nil"
>
> I am not sure what all the differences are, but it seems to be where the
> change in behavior came from.
Fixed. Thank you. I also updated documentation and added tests.
Regards,
--
Nicolas Goaziou
^ permalink raw reply [flat|nested] 7+ messages in thread
* Re: change in calling remote code blocks?
2018-01-22 18:44 ` Nicolas Goaziou
@ 2018-01-22 19:24 ` Nicolas Goaziou
2018-01-23 4:36 ` numbchild
0 siblings, 1 reply; 7+ messages in thread
From: Nicolas Goaziou @ 2018-01-22 19:24 UTC (permalink / raw)
To: John Kitchin; +Cc: emacs-orgmode
Nicolas Goaziou <mail@nicolasgoaziou.fr> writes:
> Fixed. Thank you. I also updated documentation and added tests.
As a side note, file:name syntax is a bit weak. It prevents using colons
in a name, as reported by the linter. I don't know if the feature is
used extensively but it may be worth considering changing references
syntax to, e.g, "file::name".
^ permalink raw reply [flat|nested] 7+ messages in thread
* Re: change in calling remote code blocks?
2018-01-22 19:24 ` Nicolas Goaziou
@ 2018-01-23 4:36 ` numbchild
0 siblings, 0 replies; 7+ messages in thread
From: numbchild @ 2018-01-23 4:36 UTC (permalink / raw)
To: Nicolas Goaziou; +Cc: Org-mode, John Kitchin
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I agree. use `file::name` is better.
[stardiviner] <Hack this world!> GPG key ID: 47C32433
IRC(freeenode): stardiviner Twitter: @numbchild
Key fingerprint = 9BAA 92BC CDDD B9EF 3B36 CB99 B8C4 B8E5 47C3 2433
Blog: http://stardiviner.github.io/
On Tue, Jan 23, 2018 at 3:24 AM, Nicolas Goaziou <mail@nicolasgoaziou.fr>
wrote:
> Nicolas Goaziou <mail@nicolasgoaziou.fr> writes:
>
> > Fixed. Thank you. I also updated documentation and added tests.
>
> As a side note, file:name syntax is a bit weak. It prevents using colons
> in a name, as reported by the linter. I don't know if the feature is
> used extensively but it may be worth considering changing references
> syntax to, e.g, "file::name".
>
>
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^ permalink raw reply [flat|nested] 7+ messages in thread
[parent not found: <mailman.107.1516122017.10361.emacs-orgmode@gnu.org>]
* Re: change in calling remote code blocks?
[not found] <mailman.107.1516122017.10361.emacs-orgmode@gnu.org>
@ 2018-01-18 5:48 ` edgar
0 siblings, 0 replies; 7+ messages in thread
From: edgar @ 2018-01-18 5:48 UTC (permalink / raw)
To: emacs-orgmode; +Cc: mail, jkitchin
> Message: 1
> Date: Mon, 15 Jan 2018 10:07:33 -0800
> From: John Kitchin <jkitchin@andrew.cmu.edu>
>
> with a syntax like:
>
> #+call: si.org:figure-1() :wrap html
>
>
> And C-c C-c on that line would call a code block named figure-1 in the
> file
> si.org and insert the results.
>
> in org 9.1.6, this does nothing. Does anyone know if this got changed,
> and
> if there is a new way to do that?
>
> John
You may try loading the file into the library of babel
(org-babel-lob-ingest). Then, you can call the function without a
reference to the file
#+CAPTION: s1.org
#+BEGIN_SRC org
,#+NAME: figure-1
,#+BEGIN_SRC python
return 2 + 2
,#+END_SRC
#+END_SRC
#+CAPTION: t.org
#+BEGIN_SRC org
,#+CALL: figure-1() :wrap html
,#+RESULTS:
,#+BEGIN_html
4
,#+END_html
#+END_SRC
> Message: 7
> Date: Mon, 15 Jan 2018 23:49:54 +0100
> From: Nicolas Goaziou <mail@nicolasgoaziou.fr>
> To: John Kitchin <jkitchin@andrew.cmu.edu>
>
> This sounds like a bug.
Or missed feature?
>
> It does ring a bell. However, I couldn't find any reference to this
> syntax or behaviour in the manual. Am I missing something?
I only found the evident:
#+BEGIN_QUOTE
By calling a named code block(2) from an Org mode buffer or
a table. Org can call the named ‘src’ code blocks from the
*current Org mode buffer* or from the *“Library of Babel”*
#+END_QUOTE
(bold added by me).
> Message: 8
> Date: Mon, 15 Jan 2018 16:08:26 -0800
> From: John Kitchin <jkitchin@andrew.cmu.edu>
> babel documentation somewhere. I confirmed it does work in 8.2.10, e.g.
> just with emacs -Q.
It would be nice if it did :) .
Thanks for working so well on Org. I have good news: Someone to whom I
introduced Emacs is now using it! (not my advisor... yet).
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2018-01-15 22:49 ` Nicolas Goaziou
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2018-01-22 19:24 ` Nicolas Goaziou
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