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From: Johannes Meisig <j.meisig@biologie.hu-berlin.de>
To: emacs-orgmode@gnu.org
Subject: Re: using variables defined by org mode table in R leads to invalid function error on remote host
Date: Sun, 08 Jul 2012 21:29:10 +0200	[thread overview]
Message-ID: <4FF9DF86.10503@biologie.hu-berlin.de> (raw)
In-Reply-To: <87ipdyfk61.fsf@gmx.com>

Hi Eric,

No, (require 'tramp) doesn't solve the problem. However,
commenting out

(declare-function with-parsed-tramp-file-name "tramp" (filename var 
&rest body))

in ob.el does the job. However, this can hardly be the solution (Also, 
it doesn't get rid of the error message in the minibuffer).


On 07/08/2012 03:37 PM, Eric Schulte wrote:
> Johannes Meisig <j.meisig@biologie.hu-berlin.de> writes:
>> Hi,
>> adding to this question:
>> http://lists.gnu.org/archive/html/emacs-orgmode/2012-06/msg00677.html
>> I have the following problem. If I define a table in an .org file and
>> then try to use it in R as a variable, it's no problem on the local
>> host. However, remotely I get the error:
>> Invalid function: with-parsed-tramp-file-name
> On my system that function is provided by tramp.el, so maybe adding
>    (require 'tramp)
> to your .emacs will solve this problem.
> Best,
>> The following code lines are sort of a minmal example for the
>> behavior:
>> (leave the first line away for local execution)
>> #+PROPERTY: dir /foo@bar://home/user
>> #+TBLNAME: genes
>> | names              |
>> |--------------------|
>> | ENSMUSG00000000031 |
>> | ENSMUSG00000063856 |
>> | ENSMUSG00000006056 |
>> #+BEGIN_SRC R :session :var genes=genes
>> print(genes[,1])
>> #+END_SRC
>> Any ideas? Thanks a lot,
>> Johannes

      reply	other threads:[~2012-07-08 19:29 UTC|newest]

Thread overview: 3+ messages / expand[flat|nested]  mbox.gz  Atom feed  top
2012-07-08 10:17 using variables defined by org mode table in R leads to invalid function error on remote host Johannes Meisig
2012-07-08 13:37 ` Eric Schulte
2012-07-08 19:29   ` Johannes Meisig [this message]

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