* Problem exporting table with images
@ 2011-02-08 11:19 Rainer M Krug
2011-02-08 20:02 ` Sébastien Vauban
0 siblings, 1 reply; 5+ messages in thread
From: Rainer M Krug @ 2011-02-08 11:19 UTC (permalink / raw)
To: emacs-orgmode
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1
#+TITLE: Export of images in table to pdf
#+AUTHOR: Rainer M. Krug
#+DATE: 2011-02-08 Tue
Hi
I have problems exporting this table with graphs to pdf:
1) when exporting, the links are retained, and okular tells me
"malformed url"
2) I would like to have the graphs inserted instead of the links ---
according to the manual, this should be done automatically, but it does
not work.
Is there something I am missing here?
Cheers,
Rainer
* Generating the graphs
#+begin_src R :results output org :exports both
cat("|---|---|---|\n")
for (x in 1:3) {
for (y in 1:3) {
pdf(paste("img", x, y, "pdf", sep="."))
plot(runif(100))
dev.off()
}
cat("|", paste(" [[file:img.1", x, "pdf", sep="."), "]] |",
paste(" [[./img.2", x, "pdf", sep="."), "]] |", paste("[[./img.3", x,
"pdf", sep="."), "]] |\n")
}
cat("|---|---|---|\n")
#+end_src
#+results:
#+BEGIN_ORG
|-------------------+----------------+----------------|
| [[file:img.1.1.pdf ]] | [[./img.2.1.pdf ]] | [[./img.3.1.pdf ]] |
| [[file:img.1.2.pdf ]] | [[./img.2.2.pdf ]] | [[./img.3.2.pdf ]] |
| [[file:img.1.3.pdf ]] | [[./img.2.3.pdf ]] | [[./img.3.3.pdf ]] |
|-------------------+----------------+----------------|
#+END_ORG
- --
Rainer M. Krug, PhD (Conservation Ecology, SUN), MSc (Conservation
Biology, UCT), Dipl. Phys. (Germany)
Centre of Excellence for Invasion Biology
Natural Sciences Building
Office Suite 2039
Stellenbosch University
Main Campus, Merriman Avenue
Stellenbosch
South Africa
Tel: +33 - (0)9 53 10 27 44
Cell: +27 - (0)8 39 47 90 42
Fax (SA): +27 - (0)8 65 16 27 82
Fax (D) : +49 - (0)3 21 21 25 22 44
Fax (FR): +33 - (0)9 58 10 27 44
email: Rainer@krugs.de
Skype: RMkrug
-----BEGIN PGP SIGNATURE-----
Version: GnuPG v1.4.10 (GNU/Linux)
Comment: Using GnuPG with Mozilla - http://enigmail.mozdev.org/
iEYEARECAAYFAk1RJtAACgkQoYgNqgF2egrBaACfQiORHUc3itvK3rXv9Z2JtFlm
F2cAnigBCCqt2XoUpGe0iGkyF1VRIwYj
=YifL
-----END PGP SIGNATURE-----
^ permalink raw reply [flat|nested] 5+ messages in thread* Re: Problem exporting table with images 2011-02-08 11:19 Problem exporting table with images Rainer M Krug @ 2011-02-08 20:02 ` Sébastien Vauban 2011-02-09 10:09 ` Rainer M Krug 0 siblings, 1 reply; 5+ messages in thread From: Sébastien Vauban @ 2011-02-08 20:02 UTC (permalink / raw) To: emacs-orgmode-mXXj517/zsQ Hi Rainer, Rainer M Krug wrote: > #+TITLE: Export of images in table to pdf > #+AUTHOR: Rainer M. Krug > #+DATE: 2011-02-08 Tue > > Hi > > I have problems exporting this table with graphs to pdf: > 1) when exporting, the links are retained, and okular tells me > "malformed url" > 2) I would like to have the graphs inserted instead of the links --- > according to the manual, this should be done automatically, but it does > not work. > > Is there something I am missing here? > Cheers, > > Rainer > > * Generating the graphs > #+begin_src R :results output org :exports both > cat("|---|---|---|\n") > for (x in 1:3) { > for (y in 1:3) { > pdf(paste("img", x, y, "pdf", sep=".")) > plot(runif(100)) > dev.off() > } > cat("|", paste(" [[file:img.1", x, "pdf", sep="."), "]] |", > paste(" [[./img.2", x, "pdf", sep="."), "]] |", paste("[[./img.3", x, > "pdf", sep="."), "]] |\n") > } > cat("|---|---|---|\n") > #+end_src > > #+results: > #+BEGIN_ORG > |-------------------+----------------+----------------| > | [[file:img.1.1.pdf ]] | [[./img.2.1.pdf ]] | [[./img.3.1.pdf ]] | > | [[file:img.1.2.pdf ]] | [[./img.2.2.pdf ]] | [[./img.3.2.pdf ]] | > | [[file:img.1.3.pdf ]] | [[./img.2.3.pdf ]] | [[./img.3.3.pdf ]] | > |-------------------+----------------+----------------| > #+END_ORG Don't know if that can be the source of the problem, but it appears you have spaces after the filename, in your links. Best regards, Seb -- Sébastien Vauban _______________________________________________ Emacs-orgmode mailing list Please use `Reply All' to send replies to the list. Emacs-orgmode-mXXj517/zsQ@public.gmane.org http://lists.gnu.org/mailman/listinfo/emacs-orgmode ^ permalink raw reply [flat|nested] 5+ messages in thread
* Re: Re: Problem exporting table with images 2011-02-08 20:02 ` Sébastien Vauban @ 2011-02-09 10:09 ` Rainer M Krug 2011-02-09 10:36 ` Sébastien Vauban 0 siblings, 1 reply; 5+ messages in thread From: Rainer M Krug @ 2011-02-09 10:09 UTC (permalink / raw) To: Sébastien Vauban; +Cc: emacs-orgmode -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA1 On 02/08/2011 09:02 PM, Sébastien Vauban wrote: > Hi Rainer, > > Rainer M Krug wrote: >> #+TITLE: Export of images in table to pdf >> #+AUTHOR: Rainer M. Krug >> #+DATE: 2011-02-08 Tue >> >> Hi >> >> I have problems exporting this table with graphs to pdf: >> 1) when exporting, the links are retained, and okular tells me >> "malformed url" >> 2) I would like to have the graphs inserted instead of the links --- >> according to the manual, this should be done automatically, but it does >> not work. >> >> Is there something I am missing here? >> Cheers, >> >> Rainer >> >> * Generating the graphs >> #+begin_src R :results output org :exports both >> cat("|---|---|---|\n") >> for (x in 1:3) { >> for (y in 1:3) { >> pdf(paste("img", x, y, "pdf", sep=".")) >> plot(runif(100)) >> dev.off() >> } >> cat("|", paste(" [[file:img.1", x, "pdf", sep="."), "]] |", >> paste(" [[./img.2", x, "pdf", sep="."), "]] |", paste("[[./img.3", x, >> "pdf", sep="."), "]] |\n") >> } >> cat("|---|---|---|\n") >> #+end_src >> >> #+results: >> #+BEGIN_ORG >> |-------------------+----------------+----------------| >> | [[file:img.1.1.pdf ]] | [[./img.2.1.pdf ]] | [[./img.3.1.pdf ]] | >> | [[file:img.1.2.pdf ]] | [[./img.2.2.pdf ]] | [[./img.3.2.pdf ]] | >> | [[file:img.1.3.pdf ]] | [[./img.2.3.pdf ]] | [[./img.3.3.pdf ]] | >> |-------------------+----------------+----------------| >> #+END_ORG > > Don't know if that can be the source of the problem, but it appears you have > spaces after the filename, in your links. Partly - now I have: * Generating the graphs #+begin_src R :results output org :exports both cat("|---|---|---|\n") for (x in 1:3) { for (y in 1:3) { pdf(paste("img", x, y, "pdf", sep=".")) plot(runif(100)) dev.off() } cat("|", " [[file:img_1_", x, ".pdf", "]] |", " [[./img_2_", x, ".pdf", "]] |", "[[./img_3_", x, ".pdf", "]] |\n", sep="") } cat("|---|---|---|\n") #+end_src #+results: #+BEGIN_ORG |---|---|---| | [[file:img_1_1.pdf]] | [[./img_2_1.pdf]] |[[./img_3_1.pdf]] | | [[file:img_1_2.pdf]] | [[./img_2_2.pdf]] |[[./img_3_2.pdf]] | | [[file:img_1_3.pdf]] | [[./img_2_3.pdf]] |[[./img_3_3.pdf]] | |---|---|---| #+END_ORG The table is translated to LaTeX as: \begin{tabular}{lll} \hline \includegraphics[width=10em]{./img_1_1.pdf} & \includegraphics[width=10em]{./img_2_1.pdf} & \includegraphics[width=10em]{./img_3_1.pdf} \\ \includegraphics[width=10em]{./img_1_2.pdf} & \includegraphics[width=10em]{./img_2_2.pdf} & \includegraphics[width=10em]{./img_3_2.pdf} \\ \includegraphics[width=10em]{./img_1_3.pdf} & \includegraphics[width=10em]{./img_2_3.pdf} & \includegraphics[width=10em]{./img_3_3.pdf} \\ \hline \end{tabular} Which gives the following error: #### LaTeX Warning: File `./img_1_1.pdf' not found on input line 68. !pdfTeX error: pdflatex (file ./img_1_1.pdf): cannot find image file ==> Fatal error occurred, no output PDF file produced! #### So do I have to provide absolute paths to the graphs? Cheers, Rainer > Best regards, > Seb > - -- Rainer M. Krug, PhD (Conservation Ecology, SUN), MSc (Conservation Biology, UCT), Dipl. Phys. (Germany) Centre of Excellence for Invasion Biology Natural Sciences Building Office Suite 2039 Stellenbosch University Main Campus, Merriman Avenue Stellenbosch South Africa Tel: +33 - (0)9 53 10 27 44 Cell: +27 - (0)8 39 47 90 42 Fax (SA): +27 - (0)8 65 16 27 82 Fax (D) : +49 - (0)3 21 21 25 22 44 Fax (FR): +33 - (0)9 58 10 27 44 email: Rainer@krugs.de Skype: RMkrug -----BEGIN PGP SIGNATURE----- Version: GnuPG v1.4.10 (GNU/Linux) Comment: Using GnuPG with Mozilla - http://enigmail.mozdev.org/ iEYEARECAAYFAk1SZ9MACgkQoYgNqgF2egqNCACcDoJzyUk02hEWWOHsnM9RkKw9 52EAnjB3HuJlNzUo6PrAdWQlqTbBaV8H =x8b/ -----END PGP SIGNATURE----- ^ permalink raw reply [flat|nested] 5+ messages in thread
* Re: Problem exporting table with images 2011-02-09 10:09 ` Rainer M Krug @ 2011-02-09 10:36 ` Sébastien Vauban 2011-02-09 11:21 ` Rainer M Krug 0 siblings, 1 reply; 5+ messages in thread From: Sébastien Vauban @ 2011-02-09 10:36 UTC (permalink / raw) To: emacs-orgmode-mXXj517/zsQ Hi Rainer, Rainer M Krug wrote: > Which gives the following error: > > #### > LaTeX Warning: File `./img_1_1.pdf' not found on input line 68. > > !pdfTeX error: pdflatex (file ./img_1_1.pdf): cannot find image file > ==> Fatal error occurred, no output PDF file produced! > #### > > So do I have to provide absolute paths to the graphs? Why prefixing with `.', which is the current directory? If you correctly set the search path for the images (so that it includes the current directory -- that setting is certainly there by default), it should be OK. So, I'd try opting out the `./' prefix in front of your links, if that's acceptable for you. Best regards, Seb -- Sébastien Vauban _______________________________________________ Emacs-orgmode mailing list Please use `Reply All' to send replies to the list. Emacs-orgmode-mXXj517/zsQ@public.gmane.org http://lists.gnu.org/mailman/listinfo/emacs-orgmode ^ permalink raw reply [flat|nested] 5+ messages in thread
* Re: Re: Problem exporting table with images 2011-02-09 10:36 ` Sébastien Vauban @ 2011-02-09 11:21 ` Rainer M Krug 0 siblings, 0 replies; 5+ messages in thread From: Rainer M Krug @ 2011-02-09 11:21 UTC (permalink / raw) To: Sébastien Vauban; +Cc: emacs-orgmode -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA1 On 02/09/2011 11:36 AM, Sébastien Vauban wrote: > Hi Rainer, > > Rainer M Krug wrote: >> Which gives the following error: >> >> #### >> LaTeX Warning: File `./img_1_1.pdf' not found on input line 68. >> >> !pdfTeX error: pdflatex (file ./img_1_1.pdf): cannot find image file >> ==> Fatal error occurred, no output PDF file produced! >> #### >> >> So do I have to provide absolute paths to the graphs? > > Why prefixing with `.', which is the current directory? If you correctly set > the search path for the images (so that it includes the current directory -- > that setting is certainly there by default), it should be OK. > > So, I'd try opting out the `./' prefix in front of your links, if that's > acceptable for you. Fixed it - the problem was the "." in the filename of the image. If I use "_" instead, it works. LaTeX seems to split the filemane and the extension after the *first* "." and tries to identify the image type by using everything right of the first "." - so it wont work if the file name is "img.2.3.pdf", but with "img_2_3.pdf" it does. Pitty - I like the "." in the filenames (and I don't like the "_"). I guess it is a LaTeX question, but is there a way of telling LaTeX to split after the *last* "." or to specify the image type? Thanks, Rainer > > Best regards, > Seb > - -- Rainer M. Krug, PhD (Conservation Ecology, SUN), MSc (Conservation Biology, UCT), Dipl. Phys. (Germany) Centre of Excellence for Invasion Biology Natural Sciences Building Office Suite 2039 Stellenbosch University Main Campus, Merriman Avenue Stellenbosch South Africa Tel: +33 - (0)9 53 10 27 44 Cell: +27 - (0)8 39 47 90 42 Fax (SA): +27 - (0)8 65 16 27 82 Fax (D) : +49 - (0)3 21 21 25 22 44 Fax (FR): +33 - (0)9 58 10 27 44 email: Rainer@krugs.de Skype: RMkrug -----BEGIN PGP SIGNATURE----- Version: GnuPG v1.4.10 (GNU/Linux) Comment: Using GnuPG with Mozilla - http://enigmail.mozdev.org/ iEYEARECAAYFAk1SeMoACgkQoYgNqgF2egrMfwCfQefWwyHzCrFYxJTCQTNHxbb2 8YAAniGIABHy6oYkylXIrgYaI7Cs+dUf =UL3F -----END PGP SIGNATURE----- ^ permalink raw reply [flat|nested] 5+ messages in thread
end of thread, other threads:[~2011-02-09 11:21 UTC | newest] Thread overview: 5+ messages (download: mbox.gz / follow: Atom feed) -- links below jump to the message on this page -- 2011-02-08 11:19 Problem exporting table with images Rainer M Krug 2011-02-08 20:02 ` Sébastien Vauban 2011-02-09 10:09 ` Rainer M Krug 2011-02-09 10:36 ` Sébastien Vauban 2011-02-09 11:21 ` Rainer M Krug
Code repositories for project(s) associated with this public inbox https://git.savannah.gnu.org/cgit/emacs/org-mode.git This is a public inbox, see mirroring instructions for how to clone and mirror all data and code used for this inbox; as well as URLs for read-only IMAP folder(s) and NNTP newsgroup(s).