Re: source code block export no expansion

From: "Thomas S. Dye" <tsd@tsdye.com>
To: Andreas Leha <andreas.leha@med.uni-goettingen.de>
Cc: emacs-orgmode@gnu.org
Subject: Re: source code block export no expansion
Date: Wed, 8 Dec 2010 06:49:55 -1000	[thread overview]
Message-ID: <1DE4DEF3-881D-480B-85C2-2E9453D2DCC1@tsdye.com> (raw)
In-Reply-To: <4CFF2BCF.4030400@med.uni-goettingen.de>

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Hi Andreas,

I've put a bug report on Eric and Dan's stack.  Thanks again for  
pointing this out.

All the best,
Tom

On Dec 7, 2010, at 8:55 PM, Andreas Leha wrote:

> Hi Tom,
>
> thanks a lot for looking into it!  Fixing this is unfortunately off  
> my limits.
>
> But for me the unnamed session is a valid work-around for me, since  
> I do not need several sessions right now.  Thanks for this hint.
>
> Cheers,
> Andreas
>
>
>
> Am 07.12.2010 21:14, schrieb Thomas S. Dye:
>>
>> Aloha Andreas,
>>
>> Thanks for your patience and persistence.  I think this might  
>> qualify as a bug.  Using your code, if I don't run R in a session,  
>> or if I run R in a session but don't name the session, everything  
>> works as expected.  The behavior changes for me when the session  
>> gets a name.
>>
>> All the best,
>> Tom
>>
>>
>> On Dec 7, 2010, at 9:46 AM, Andreas Leha wrote:
>>
>>> Hi Tom,
>>>
>>> thanks for the answer and thanks for spotting the typo.  But even  
>>> with the typo corrected during export the noweb links are still  
>>> exported.
>>>   #+srcname: mod1
>>>   #+begin_src R :tangle no :export code
>>>     print("mod1")
>>>   #+end_src
>>>
>>>   #+srcname: mod2
>>>   #+begin_src R :tangle no :export code
>>>     print("mod2")
>>>   #+end_src
>>>
>>>   #+srcname: part1
>>>   #+begin_src R :noweb tangle :tangle yes :exports code :session *R*
>>>     <<mod1>>
>>>     <<mod2>>
>>>   #+end_src
>>>
>>> Result:
>>> ...
>>> \lstset{language=R}
>>> \begin{lstlisting}
>>> print("mod1")
>>> print("mod2")
>>> \end{lstlisting}
>>> ...
>>>
>>>
>>>
>>> Am 07.12.2010 20:33, schrieb Thomas S. Dye:
>>>>
>>>> Aloha Andreas,
>>>>
>>>> On Dec 7, 2010, at 8:49 AM, Andreas Leha wrote:
>>>>
>>>>> Hi Tom,
>>>>>
>>>>> thanks for this answer.  This indeed comes closer to what I want.
>>>>>
>>>>> But, some comments:
>>>>>
>>>>> (1) There seems to be an error in the manual:
>>>>> In the manual the :noweb tangle header argument is given  
>>>>> as :noweb yes,
>>>>> which is why I missed that option.
>>>>
>>>> I believe this is fixed at the source now, but am not sure how  
>>>> long it will take to propagate to the distributed documentation.
>>>>
>>>>> (2) The noweb link are expanded *always* (i.e. execution, export,
>>>>> tangle) even with the :noweb tangle option:
>>>>>  #+srcname: mod1
>>>>>  #+begin_src R :tangle no :export code
>>>>>    print("mod1")
>>>>>  #+end_src
>>>>>
>>>>>  #+srcname: mod2
>>>>>  #+begin_src R :tangle no :export code
>>>>>    print("mod2")
>>>>>  #+end_src
>>>>>
>>>>>  #+srcname: part1
>>>>>  #+begin_src R :noweb tangle :tangle yes :export code :session *R*
>>>>>    <<mod1>>
>>>>>    <<mod2>>
>>>>>  #+end_src
>>>>>
>>>>>
>>>>
>>>> Perhaps this has to do with using :export instead of the correct  
>>>> header argument, :exports?
>>>>
>>>>> (3) I am looking for an option to disable the noweb link expansion
>>>>> during *export* only.  However, as I understand it, the :noweb  
>>>>> tangle
>>>>> header option is supposed to disable the expansion also for  
>>>>> *execution*.
>>>>
>>>> This isn't how it works for me.  :noweb tangle inhibits noweb  
>>>> expansion during export only.
>>>>
>>>>>
>>>>> So, is this not possible right now?
>>>>>
>>>>
>>>> It is possible now.  If the :exports header argument doesn't fix  
>>>> your problem, come back to the list.
>>>>
>>>> All the best,
>>>> Tom
>>>>
>>>>> Cheers,
>>>>> Andreas
>>>>>
>>>>>
>>>>>
>>>>> Am 07.12.2010 19:37, schrieb Thomas S. Dye:
>>>>>> Aloha Andreas,
>>>>>>
>>>>>> Perhaps :noweb tangle will do what you want.
>>>>>>
>>>>>> hth,
>>>>>> Tom
>>>>>>
>>>>>> On Dec 7, 2010, at 7:38 AM, Andreas Leha wrote:
>>>>>>
>>>>>>> Hi all,
>>>>>>>
>>>>>>> I have a question about exporting source code blocks.  Say, I  
>>>>>>> have
>>>>>>> several modules (mod1, mod2), that build a bigger part (part1)  
>>>>>>> of my
>>>>>>> program, e.g.:
>>>>>>>
>>>>>>>
>>>>>>> #+srcname: mod1
>>>>>>> #+begin_src R :tangle no :export code
>>>>>>>   print("mod1")
>>>>>>> #+end_src
>>>>>>>
>>>>>>> #+srcname: mod2
>>>>>>> #+begin_src R :tangle no :export code
>>>>>>>   print("mod2")
>>>>>>> #+end_src
>>>>>>>
>>>>>>> #+srcname: part1
>>>>>>> #+begin_src R :noweb yes :tangle yes :export code :session *R*
>>>>>>>   <<mod1>>
>>>>>>>   <<mod2>>
>>>>>>> #+end_src
>>>>>>>
>>>>>>>
>>>>>>> Now during the tangling I would like to tangle just the full  
>>>>>>> part1 -
>>>>>>> with noweb links being expanded.  Also during execution the  
>>>>>>> noweb links
>>>>>>> should be expanded.  This is not a problem.
>>>>>>>
>>>>>>> But at the same time, during the export I'd like to export all  
>>>>>>> three
>>>>>>> code snippets, but I'd prefer the noweb links not to be  
>>>>>>> expanded.  Is
>>>>>>> that possible?
>>>>>>>
>>>>>>> Thanks in advance,
>>>>>>> Andreas
>>>>>>>
>>>>>>> _______________________________________________
>>>>>>> Emacs-orgmode mailing list
>>>>>>> Please use `Reply All' to send replies to the list.
>>>>>>> Emacs-orgmode@gnu.org
>>>>>>> http://lists.gnu.org/mailman/listinfo/emacs-orgmode
>>>>>>
>>>>>>
>>>>>> _______________________________________________
>>>>>> Emacs-orgmode mailing list
>>>>>> Please use `Reply All' to send replies to the list.
>>>>>> Emacs-orgmode@gnu.org
>>>>>> http://lists.gnu.org/mailman/listinfo/emacs-orgmode
>>>>>
>>>>> -- 
>>>>> Andreas Leha
>>>>>
>>>>> Universitätsmedizin Göttingen
>>>>> Abteilung Medizinische Statistik
>>>>> Humboldtallee 32
>>>>> 37073 Göttingen
>>>>>
>>>>> Tel: +49 (0)551 39-10710
>>>>> Fax: +49 (0)551 39-4995
>>>>>
>>>>> http://www.ams.med.uni-goettingen.de/amsneu/leha.html
>>>>>
>>>>>
>>>>>
>>>>> University Medical Center Göttingen
>>>>> Department for Medical Statistics
>>>>> Humboldtallee 32
>>>>> 37073 Göttingen
>>>>> Germany
>>>>>
>>>>> Phone: +49 (0) 551 39-10710
>>>>> Fax: +49 (0) 551 39-4995
>>>>>
>>>>> http://www.ams.med.uni-goettingen.de/amsneu/leha-en.html
>>>>>
>>>>>
>>>>> _______________________________________________
>>>>> Emacs-orgmode mailing list
>>>>> Please use `Reply All' to send replies to the list.
>>>>> Emacs-orgmode@gnu.org
>>>>> http://lists.gnu.org/mailman/listinfo/emacs-orgmode
>>>>
>>>
>>> -- 
>>> Andreas Leha
>>>
>>> Universitätsmedizin Göttingen
>>> Abteilung Medizinische Statistik
>>> Humboldtallee 32
>>> 37073 Göttingen
>>>
>>> Tel: +49 (0)551 39-10710
>>> Fax: +49 (0)551 39-4995
>>>
>>> http://www.ams.med.uni-goettingen.de/amsneu/leha.html
>>>
>>>
>>>
>>> University Medical Center Göttingen
>>> Department for Medical Statistics
>>> Humboldtallee 32
>>> 37073 Göttingen
>>> Germany
>>>
>>> Phone: +49 (0) 551 39-10710
>>> Fax: +49 (0) 551 39-4995
>>>
>>> http://www.ams.med.uni-goettingen.de/amsneu/leha-en.html
>>>
>>
>>
>> _______________________________________________
>> Emacs-orgmode mailing list
>> Please use `Reply All' to send replies to the list.
>> Emacs-orgmode@gnu.org
>> http://lists.gnu.org/mailman/listinfo/emacs-orgmode
>>
> _______________________________________________
> Emacs-orgmode mailing list
> Please use `Reply All' to send replies to the list.
> Emacs-orgmode@gnu.org
> http://lists.gnu.org/mailman/listinfo/emacs-orgmode

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