Re: Emacs/ESS/org freezes/hangs on big data/ RAM(~256GB) processes when run in org/babel

[Andreas Leha <andreas.leha@med.uni-goettingen.de>]

"Charles C. Berry" <ccberry@ucsd.edu> writes:
> On Thu, 18 Jun 2015, Andreas Leha wrote:
>
>> Hi Chuck,
>>
>> [snip: all context about workflows for R projects]
>>
>>> For example, the bioConductor package geneRxCluster [1] comes from an
>>> Org mode document that contains the C and R code as src blocks and a
>>> subtree with the vignette (Using geneRxCluster) that analyzes data,
>>> produces graphics, etc. tangle-ing the src blocks and exporting the
>>> vignette creates the package.
>>>
>>
>> I'd love to see that org document, but I do not seem to be able to find
>> it.  Is it available anywhere?
>
> Andreas,
>
> It is now, or at least the relevant subset of it is at:
>
> https://github.com/chasberry/geneRx/blob/master/Rpackage.org
>
> It is best viewed in Org mode as there are internal links that github
> does not honor (so you get `404 This is not...' messages if you click
> on them).
>
> And it is best to use those internal links as the file was not
> designed to be read from top to bottom - it has lots of snippets I
> used to develop and check code along the way that are not in the
> actual package and I have left them in place.
>

That is awesome!  Really appreciated!  I will take a good look.

Thanks,
Andreas