;;; ob-tangle.el --- extract source code from org-mode files

;; Copyright (C) 2009, 2010  Free Software Foundation, Inc.

;; Author: Eric Schulte
;; Keywords: literate programming, reproducible research
;; Homepage: http://orgmode.org
;; Version: 7.01trans

;; This file is part of GNU Emacs.

;; GNU Emacs is free software: you can redistribute it and/or modify
;; it under the terms of the GNU General Public License as published by
;; the Free Software Foundation, either version 3 of the License, or
;; (at your option) any later version.

;; GNU Emacs is distributed in the hope that it will be useful,
;; but WITHOUT ANY WARRANTY; without even the implied warranty of
;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
;; GNU General Public License for more details.

;; You should have received a copy of the GNU General Public License
;; along with GNU Emacs.  If not, see <http://www.gnu.org/licenses/>.

;;; Commentary:

;; Extract the code from source blocks out into raw source-code files.

;;; Code:
(require 'ob)
(require 'org-src)
(eval-when-compile
  (require 'cl))

(declare-function org-link-escape "org" (text &optional table))
(declare-function org-heading-components "org" ())
(declare-function org-back-to-heading "org" (invisible-ok))
(declare-function org-fill-template "org" (template alist))

;;;###autoload
(defcustom org-babel-tangle-lang-exts
  '(("emacs-lisp" . "el"))
  "Alist mapping languages to their file extensions.
The key is the language name, the value is the string that should
be inserted as the extension commonly used to identify files
written in this language.  If no entry is found in this list,
then the name of the language is used."
  :group 'org-babel-tangle
  :type '(repeat
	  (cons
	   (string "Language name")
	   (string "File Extension"))))

(defcustom org-babel-post-tangle-hook nil
  "Hook run in code files tangled by `org-babel-tangle'."
  :group 'org-babel
  :type 'hook)

(defcustom org-babel-pre-tangle-hook '(save-buffer)
  "Hook run at the beginning of `org-babel-tangle'."
  :group 'org-babel
  :type 'hook)

(defcustom org-babel-tangle-pad-newline t
  "Switch indicating whether to pad tangled code with newlines."
  :group 'org-babel
  :type 'boolean)

(defcustom org-babel-tangle-comment-format-beg "[[%link][%sourcename]]"
  "Format of inserted comments in tangled code files.
The following format strings can be used to insert special
information into the output using `org-fill-template'.
%start-line --- the line number at the start of the code block
%file --------- the file from which the code block was tangled
%link --------- Org-mode style link to the code block
%source-name -- name of the code block"
  :group 'org-babel
  :type 'string)

(defcustom org-babel-tangle-comment-format-end "%sourcename ends here"
  "Format of inserted comments in tangled code files.
The following format strings can be used to insert special
information into the output using `org-fill-template'.
%start-line --- the line number at the start of the code block
%file --------- the file from which the code block was tangled
%link --------- Org-mode style link to the code block
%source-name -- name of the code block"
  :group 'org-babel
  :type 'string)

(defun org-babel-find-file-noselect-refresh (file)
  "Find file ensuring that the latest changes on disk are
represented in the file."
  (find-file-noselect file)
  (with-current-buffer (get-file-buffer file)
    (revert-buffer t t t)))

(defmacro org-babel-with-temp-filebuffer (file &rest body)
  "Open FILE into a temporary buffer execute BODY there like
`progn', then kill the FILE buffer returning the result of
evaluating BODY."
  (declare (indent 1))
  (let ((temp-result (make-symbol "temp-result"))
	(temp-file (make-symbol "temp-file"))
	(visited-p (make-symbol "visited-p")))
    `(let (,temp-result ,temp-file
           (,visited-p (get-file-buffer ,file)))
       (org-babel-find-file-noselect-refresh ,file)
       (setf ,temp-file (get-file-buffer ,file))
       (with-current-buffer ,temp-file
	 (setf ,temp-result (progn ,@body)))
       (unless ,visited-p (kill-buffer ,temp-file))
       ,temp-result)))

;;;###autoload
(defun org-babel-load-file (file)
  "Load Emacs Lisp source code blocks in the Org-mode FILE.
This function exports the source code using
`org-babel-tangle' and then loads the resulting file using
`load-file'."
  (flet ((age (file)
              (float-time
               (time-subtract (current-time)
                              (nth 5 (or (file-attributes (file-truename file))
                                         (file-attributes file)))))))
    (let* ((base-name (file-name-sans-extension file))
           (exported-file (concat base-name ".el")))
      ;; tangle if the org-mode file is newer than the elisp file
      (unless (and (file-exists-p exported-file)
		   (> (age file) (age exported-file)))
        (org-babel-tangle-file file exported-file "emacs-lisp"))
      (load-file exported-file)
      (message "loaded %s" exported-file))))

;;;###autoload
(defun org-babel-tangle-file (file &optional target-file lang)
  "Extract the bodies of source code blocks in FILE.
Source code blocks are extracted with `org-babel-tangle'.
Optional argument TARGET-FILE can be used to specify a default
export file for all source blocks.  Optional argument LANG can be
used to limit the exported source code blocks by language."
  (interactive "fFile to tangle: \nP")
  (let ((visited-p (get-file-buffer (expand-file-name file)))
	to-be-removed)
    (save-window-excursion
      (find-file file)
      (setq to-be-removed (current-buffer))
      (org-babel-tangle target-file lang))
    (unless visited-p
      (kill-buffer to-be-removed))))

(defun org-babel-tangle-publish (_ filename pub-dir)
  "Tangle FILENAME and place the results in PUB-DIR."
  (mapc (lambda (el) (copy-file el pub-dir t)) (org-babel-tangle-file filename)))

;;;###autoload
(defun org-babel-tangle (&optional target-file lang)
  "Write code blocks to source-specific files.
Extract the bodies of all source code blocks from the current
file into their own source-specific files.  Optional argument
TARGET-FILE can be used to specify a default export file for all
source blocks.  Optional argument LANG can be used to limit the
exported source code blocks by language."
  (interactive)
  (run-hooks 'org-babel-pre-tangle-hook)
  (save-excursion
    (let ((block-counter 0)
	  (org-babel-default-header-args
	   (if target-file
	       (org-babel-merge-params org-babel-default-header-args
				       (list (cons :tangle target-file)))
	     org-babel-default-header-args))
          path-collector)
      (mapc ;; map over all languages
       (lambda (by-lang)
         (let* ((lang (car by-lang))
                (specs (cdr by-lang))
		(ext (or (cdr (assoc lang org-babel-tangle-lang-exts)) lang))
                (lang-f (intern
			 (concat
			  (or (and (cdr (assoc lang org-src-lang-modes))
				   (symbol-name
				    (cdr (assoc lang org-src-lang-modes))))
			      lang)
			  "-mode")))
                she-banged)
           (mapc
            (lambda (spec)
              (flet ((get-spec (name)
                               (cdr (assoc name (nth 4 spec)))))
                (let* ((tangle (get-spec :tangle))
                       (she-bang ((lambda (sheb) (when (> (length sheb) 0) sheb))
				  (get-spec :shebang)))
                       (base-name (cond
				   ((string= "yes" tangle)
				    (file-name-sans-extension
				     (buffer-file-name)))
				   ((string= "no" tangle) nil)
				   ((> (length tangle) 0) tangle)))
                       (file-name (when base-name
                                    ;; decide if we want to add ext to base-name
                                    (if (and ext (string= "yes" tangle))
                                        (concat base-name "." ext) base-name))))
                  (when file-name
                    ;; delete any old versions of file
                    (when (and (file-exists-p file-name)
                               (not (member file-name path-collector)))
                      (delete-file file-name))
                    ;; drop source-block to file
                    (with-temp-buffer
                      (when (fboundp lang-f) (funcall lang-f))
                      (when (and she-bang (not (member file-name she-banged)))
                        (insert (concat she-bang "\n"))
                        (setq she-banged (cons file-name she-banged)))
                      (org-babel-spec-to-string spec)
		      ;; We avoid append-to-file as it does not work with tramp.
		      (let ((content (buffer-string)))
			(with-temp-buffer
			  (if (file-exists-p file-name)
			      (insert-file-contents file-name))
			  (goto-char (point-max))
			  (insert content)
			  (write-region nil nil file-name))))
		    ;; if files contain she-bangs, then make the executable
		    (when she-bang (set-file-modes file-name #o755))
                    ;; update counter
                    (setq block-counter (+ 1 block-counter))
                    (add-to-list 'path-collector file-name)))))
            specs)))
       (org-babel-tangle-collect-blocks lang))
      (message "tangled %d code block%s from %s" block-counter
               (if (= block-counter 1) "" "s")
	       (file-name-nondirectory (buffer-file-name (current-buffer))))
      ;; run `org-babel-post-tangle-hook' in all tangled files
      (when org-babel-post-tangle-hook
	(mapc
	 (lambda (file)
	   (org-babel-with-temp-filebuffer file
	     (run-hooks 'org-babel-post-tangle-hook)))
	 path-collector))
      path-collector)))

(defun org-babel-tangle-clean ()
  "Remove comments inserted by `org-babel-tangle'.
Call this function inside of a source-code file generated by
`org-babel-tangle' to remove all comments inserted automatically
by `org-babel-tangle'.  Warning, this comment removes any lines
containing constructs which resemble org-mode file links or noweb
references."
  (interactive)
  (goto-char (point-min))
  (while (or (re-search-forward "\\[\\[file:.*\\]\\[.*\\]\\]" nil t)
             (re-search-forward "<<[^[:space:]]*>>" nil t))
    (delete-region (save-excursion (beginning-of-line 1) (point))
                   (save-excursion (end-of-line 1) (forward-char 1) (point)))))

(defvar org-stored-links)
(defun org-babel-tangle-collect-blocks (&optional language)
  "Collect source blocks in the current Org-mode file.
Return an association list of source-code block specifications of
the form used by `org-babel-spec-to-string' grouped by language.
Optional argument LANG can be used to limit the collected source
code blocks by language."
  (let ((block-counter 1) (current-heading "") blocks)
    (org-babel-map-src-blocks (buffer-file-name)
      ((lambda (new-heading)
	 (if (not (string= new-heading current-heading))
	     (progn
	       (setq block-counter 1)
	       (setq current-heading new-heading))
	   (setq block-counter (+ 1 block-counter))))
       (replace-regexp-in-string "[ \t]" "-"
				 (condition-case nil
				     (nth 4 (org-heading-components))
				   (error (buffer-file-name)))))
      (let* ((start-line (save-restriction (widen)
					   (+ 1 (line-number-at-pos (point)))))
	     (file (buffer-file-name))
	     (link (progn (call-interactively 'org-store-link)
                          (org-babel-clean-text-properties
			   (car (pop org-stored-links)))))
             (info (org-babel-get-src-block-info))
	     (params (nth 2 info))
             (source-name (intern (or (nth 4 info)
                                      (format "%s:%d"
					      current-heading block-counter))))
	     (src-lang (nth 0 info))
	     (expand-cmd (intern (concat "org-babel-expand-body:" src-lang)))
	     (body ((lambda (body)
		      (if (assoc :no-expand params)
			  body
			(funcall (if (fboundp expand-cmd)
				     expand-cmd
				   'org-babel-expand-body:generic)
				 body params)))
		    (if (and (cdr (assoc :noweb params))
			     (let ((nowebs (split-string
					    (cdr (assoc :noweb params)))))
			       (or (member "yes" nowebs)
				   (member "tangle" nowebs))))
			(org-babel-expand-noweb-references info)
		      (nth 1 info))))
	     (comment (when (or (string= "both" (cdr (assoc :comments params)))
				(string= "org" (cdr (assoc :comments params))))
			;; from the previous heading or code-block end
			(buffer-substring
			 (max (condition-case nil
				  (save-excursion
				    (org-back-to-heading t) (point))
				(error 0))
			      (save-excursion (re-search-backward
					       org-babel-src-block-regexp nil t)
					      (match-end 0)))
			 (point))))
             by-lang)
        (unless (string= (cdr (assoc :tangle params)) "no")
          (unless (and language (not (string= language src-lang)))
            ;; add the spec for this block to blocks under it's language
            (setq by-lang (cdr (assoc src-lang blocks)))
            (setq blocks (delq (assoc src-lang blocks) blocks))
            (setq blocks (cons
			  (cons src-lang
				(cons (list start-line file link
					    source-name params body comment)
				      by-lang)) blocks))))))
    ;; ensure blocks in the correct order
    (setq blocks
          (mapcar
	   (lambda (by-lang) (cons (car by-lang) (reverse (cdr by-lang))))
	   blocks))
    blocks))

(defun org-babel-spec-to-string (spec)
  "Insert SPEC into the current file.
Insert the source-code specified by SPEC into the current
source code file.  This function uses `comment-region' which
assumes that the appropriate major-mode is set.  SPEC has the
form

  (start-line file link source-name params body comment)"
  (let* ((start-line (nth 0 spec))
	 (file (nth 1 spec))
	 (link (org-link-escape (nth 2 spec)))
	 (source-name (nth 3 spec))
	 (body (nth 5 spec))
	 (comment (nth 6 spec))
	 (comments (cdr (assoc :comments (nth 4 spec))))
	 (link-p (or (string= comments "both") (string= comments "link")
		     (string= comments "yes")))
	 (link-data (mapcar (lambda (el)
			      (cons (symbol-name el)
				    ((lambda (le)
				       (if (stringp le) le (format "%S" le)))
				     (eval el))))
			    '(start-line file link source-name))))
    (flet ((insert-comment (text)
	    (let ((text (org-babel-trim text)))
	      (when (and comments (not (string= comments "no"))
			 (> (length text) 0))
		(when org-babel-tangle-pad-newline (insert "\n"))
		(comment-region (point) (progn (insert text) (point)))
		(end-of-line nil) (insert "\n")))))
      (when comment (insert-comment comment))
      (when link-p
	(insert-comment
	 (org-fill-template org-babel-tangle-comment-format-beg link-data)))
      (when org-babel-tangle-pad-newline (insert "\n"))
      (insert (format "%s\n" (replace-regexp-in-string
			      "^," "" (org-babel-indent-safe-trim body))))
      (when link-p
	(insert-comment
	 (org-fill-template org-babel-tangle-comment-format-end link-data))))))

(provide 'ob-tangle)

;; arch-tag: 413ced93-48f5-4216-86e4-3fc5df8c8f24

;;; ob-tangle.el ends here