From: Shiyuan <gshy2014@gmail.com>
To: emacs-orgmode@gnu.org
Subject: Babel-R TBLFM example
Date: Tue, 24 Jun 2014 23:55:46 -0700 [thread overview]
Message-ID: <CAOm4EMty9PkJY5t=B-ysLb53MSzD2R8Df9YR561GifgQoxqktw@mail.gmail.com> (raw)
[-- Attachment #1: Type: text/plain, Size: 1544 bytes --]
Hi all,
I am looking at the Babel R example in
http://orgmode.org/worg/org-tutorials/org-R/org-R.html
This short example show how to use code block in Org Tables.
The example first makes an org-mode table, which I can follow and reproduce
the result:
#+name: tbl-example-data()
#+begin_src R
runif(n=5, min=0, max=1)
#+end_src
#+RESULTS: tbl-example-data
| 0.118510485393927 |
| 0.742342338664457 |
| 0.438421099446714 |
| 0.0867570964619517 |
| 0.604204315226525 |
Then it defines r source code block and use TBLFM
#+name: R-mean(x)
#+begin_src R
mean(x)
#+end_src
#+RESULTS: R-mean
#+tblname: summaries
| mean |
|--------|
| #ERROR |
#+TBLFM: @2$1='(sbe "R-mean" (x "tbl-example-data()"))
When I export to html(C-c C-e h o), the #+TBLFM seems to be ignored and
shows no effect. When I place my cursor in the table and recalculate the
table formula using C-u C-c C-c in the table. I got an error as shown
above. In the *Message* buffer, I can see the following messages.
byte-code: Beginning of buffer [8 times]
Re-applying formulas to full table...
Re-applying formula to field: @2$1
Re-applying formulas to full table...(line 1)
Re-applying formula to field: @2$1
Re-applying formulas to 1 lines...done
Re-applying formulas...done [2 times]
Any steps I missed? I am using org mode 8.2.6
Also, I found this tutorial for org-R
http://orgmode.org/worg/org-tutorials/org-R/org-R.html, however, the
org-R-apply function seems no longer available in my org mode 8.2.6. Is
org-R supposed to be deprecated?
Thanks.
Shiyuan
[-- Attachment #2: Type: text/html, Size: 2379 bytes --]
next reply other threads:[~2014-06-25 6:55 UTC|newest]
Thread overview: 9+ messages / expand[flat|nested] mbox.gz Atom feed top
2014-06-25 6:55 Shiyuan [this message]
2014-07-28 13:21 ` Babel-R TBLFM example Bastien
2014-07-29 6:15 ` Shiyuan
2014-07-29 13:20 ` Bastien
2014-08-24 23:02 ` Shiyuan
2014-08-25 7:51 ` Sebastien Vauban
2014-08-26 6:18 ` Shiyuan
2014-08-26 6:57 ` Thomas S. Dye
2014-08-26 7:23 ` Sebastien Vauban
Reply instructions:
You may reply publicly to this message via plain-text email
using any one of the following methods:
* Save the following mbox file, import it into your mail client,
and reply-to-all from there: mbox
Avoid top-posting and favor interleaved quoting:
https://en.wikipedia.org/wiki/Posting_style#Interleaved_style
List information: https://www.orgmode.org/
* Reply using the --to, --cc, and --in-reply-to
switches of git-send-email(1):
git send-email \
--in-reply-to='CAOm4EMty9PkJY5t=B-ysLb53MSzD2R8Df9YR561GifgQoxqktw@mail.gmail.com' \
--to=gshy2014@gmail.com \
--cc=emacs-orgmode@gnu.org \
/path/to/YOUR_REPLY
https://kernel.org/pub/software/scm/git/docs/git-send-email.html
* If your mail client supports setting the In-Reply-To header
via mailto: links, try the mailto: link
Be sure your reply has a Subject: header at the top and a blank line
before the message body.
Code repositories for project(s) associated with this public inbox
https://git.savannah.gnu.org/cgit/emacs/org-mode.git
This is a public inbox, see mirroring instructions
for how to clone and mirror all data and code used for this inbox;
as well as URLs for read-only IMAP folder(s) and NNTP newsgroup(s).