Re: [Problems with org-ref-helm-insert-ref-link and org-id-get-create]

[John Kitchin <jkitchin@andrew.cmu.edu>]

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it usually takes up to 4 hours to propagate to MELPA.  I can't reproduce
the error you report.  At least, with a fresh emacs and install from MELPA
everything seems to load and work fine, even with emacs 29.  There seem to
be many issues with native-compiling on the most modern emacs, are you
using that?

John

-----------------------------------
Professor John Kitchin (he/him/his)
Doherty Hall A207F
Department of Chemical Engineering
Carnegie Mellon University
Pittsburgh, PA 15213
412-268-7803
@johnkitchin
http://kitchingroup.cheme.cmu.edu



On Wed, Nov 17, 2021 at 1:58 PM Uwe Brauer <oub@mat.ucm.es> wrote:

>
> > in the most current version (3) of org-ref, the labels that are found are
> > defined in org-ref-ref-label-regexps. At the moment there isn't a pattern
> > for ID. No particular reason, I haven't used ID like that for many
> years. I
> > added and pushed that to the current repo just now.
>
> Thanks, that is in MELPA already?
>
> BTW, I downloaded the latest MELPA org-ref pkg and obtained the
> following error (running emacs 29, master a couple of days ago)
> ,----
> |
> | Debugger entered--Lisp error: (wrong-type-argument listp "gls")
> |   cl-first("gls")
> |   (org-link-set-parameters (cl-first command) :follow
> |   #'or-follow-glossary :face 'org-ref-glossary-face-fn :help-echo
> |   'or-glossary-tooltip  :export #'(lambda (path _ format) (cond ((memq
> format '(latex beamer)) (format "\\%s{%s}" (cl-first command) path)) (t
> (format "%s" path)))))
> |   (let ((command (car --dolist-tail--))) (org-link-set-parameters
> (cl-first command) :follow #'or-follow-glossary :face
> 'org-ref-glossary-face-fn :help-echo 'or-glossary-tooltip :export #'(lambda
> (path _ format) (cond ((memq format '...) (format "\\%s{%s}" (cl-first
> command) path)) (t (format "%s" path))))) (setq --dolist-tail-- (cdr
> --dolist-tail--)))
> |   (while --dolist-tail-- (let ((command (car --dolist-tail--)))
> (org-link-set-parameters (cl-first command) :follow #'or-follow-glossary
> :face 'org-ref-glossary-face-fn :help-echo 'or-glossary-tooltip :export
> #'(lambda (path _ format) (cond ((memq format ...) (format "\\%s{%s}" ...
> path)) (t (format "%s" path))))) (setq --dolist-tail-- (cdr
> --dolist-tail--))))
> |   (let ((--dolist-tail-- org-ref-glossary-gls-commands)) (while
> --dolist-tail-- (let ((command (car --dolist-tail--)))
> (org-link-set-parameters (cl-first command) :follow #'or-follow-glossary
> :face 'org-ref-glossary-face-fn :help-echo 'or-glossary-tooltip :export
> #'(lambda (path _ format) (cond (... ...) (t ...)))) (setq --dolist-tail--
> (cdr --dolist-tail--)))))
> |   eval-buffer(#<buffer  *load*> nil
> "/home/oub/.emacs.d/elpa/org-ref-20211110.1229/org-..." nil t)  ; Reading
> at buffer position 10359
> |
>  load-with-code-conversion("/home/oub/.emacs.d/elpa/org-ref-20211110.1229/org-..."
> "/home/oub/.emacs.d/elpa/org-ref-20211110.1229/org-..." nil t)
> |   load("/home/oub/.emacs.d/elpa/org-ref-20211110.1229/org-..." nil t)
> |   #f(compiled-function (c) #<bytecode
> -0x142f0bcbab31255a>)(("/home/oub/.emacs.d/elpa/org-ref-20211110.1229/org-..."
> . 1136))
> |   mapc(#f(compiled-function (c) #<bytecode -0x142f0bcbab31255a>)
> (("/home/oub/.emacs.d/elpa/org-ref-20211110.1229/org-..." . 911)
> ("/home/oub/.emacs.d/elpa/org-ref-20211110.1229/org-..." . 912)
> ("/home/oub/.emacs.d/elpa/org-ref-20211110.1229/org-..." . 913)
> ("/home/oub/.emacs.d/elpa/org-ref-20211110.1229/doi-..." . 1130)
> ("/home/oub/.emacs.d/elpa/org-ref-20211110.1229/org-..." . 1135)
> ("/home/oub/.emacs.d/elpa/org-ref-20211110.1229/org-..." . 1136)
> ("/home/oub/.emacs.d/elpa/org-ref-20211110.1229/org-..." . 1139)
> ("/home/oub/.emacs.d/elpa/org-ref-20211110.1229/org-..." . 1292)
> ("/home/oub/.emacs.d/elpa/org-ref-20211110.1229/org-..." . 1341)))
> |   package--reload-previously-loaded(#s(package-desc :name org-ref
> :version (20211110 1229) :summary "citations, cross-references and
> bibliographies in ..." :reqs ((dash (0)) (s (0)) (f (0)) (htmlize (0))
> (hydra (0)) (avy (0)) (parsebib (0)) (bibtex-completion (0)) (citeproc
> (0))) :kind nil :archive nil :dir
> "/home/oub/.emacs.d/elpa/org-ref-20211110.1229" :extras ((:url . "
> https://github.com/jkitchin/org-ref") (:keywords "org-mode" "cite" "ref"
> "label") (:maintainer "John Kitchin" . "jkitchin@andrew.cmu.edu")
> (:authors ("John Kitchin" . "jkitchin@andrew.cmu.edu")) (:commit .
> "c87b4155cd2f60ca3a9bed2e6e366c1fa47aec33")) :signed nil))
> |   package-activate-1(#s(package-desc :name org-ref :version (20211110
> 1229) :summary "citations, cross-references and bibliographies in ..."
> :reqs ((dash (0)) (s (0)) (f (0)) (htmlize (0)) (hydra (0)) (avy (0))
> (parsebib (0)) (bibtex-completion (0)) (citeproc (0))) :kind nil :archive
> nil :dir "/home/oub/.emacs.d/elpa/org-ref-20211110.1229" :extras ((:url . "
> https://github.com/jkitchin/org-ref") (:keywords "org-mode" "cite" "ref"
> "label") (:maintainer "John Kitchin" . "jkitchin@andrew.cmu.edu")
> (:authors ("John Kitchin" . "jkitchin@andrew.cmu.edu")) (:commit .
> "c87b4155cd2f60ca3a9bed2e6e366c1fa47aec33")) :signed nil) :reload :deps)
> |   package-unpack(#s(package-desc :name org-ref :version (20211110 1229)
> :summary "citations, cross-references and bibliographies in ..." :reqs
> ((dash (0)) (s (0)) (f (0)) (htmlize (0)) (hydra (0)) (avy (0)) (parsebib
> (0)) (bibtex-completion (0)) (citeproc (0))) :kind tar :archive "melpa"
> :dir nil :extras ((:commit . "c87b4155cd2f60ca3a9bed2e6e366c1fa47aec33")
> (:authors ("John Kitchin" . "jkitchin@andrew.cmu.edu")) (:maintainer
> "John Kitchin" . "jkitchin@andrew.cmu.edu") (:keywords "org-mode" "cite"
> "ref" "label") (:url . "https://github.com/jkitchin/org-ref")) :signed
> nil))
> |   #f(compiled-function (&optional good-sigs) #<bytecode
> 0x1df497376f32ca1c>)(nil)
> |   #f(compiled-function () #<bytecode -0x724af0e452d91f2>)()
> |   package--with-response-buffer-1("http://melpa.org/packages/"
> #f(compiled-function () #<bytecode 0x1a36aee082226431>) :file
> "org-ref-20211110.1229.tar.sig" :async nil :error-function
> #f(compiled-function () #<bytecode -0x724af0e452d91f2>) :noerror t)
> |   package--check-signature("http://melpa.org/packages/"
> "org-ref-20211110.1229.tar"
> "org-ref-20211110.1229/\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0..."
> nil #f(compiled-function (&optional good-sigs) #<bytecode
> 0x1df497376f32ca1c>))
> |   #f(compiled-function () #<bytecode -0xeb56f85b3b07f67>)()
> |   package--with-response-buffer-1("http://melpa.org/packages/"
> #f(compiled-function () #<bytecode -0xeb56f85b3b07f67>) :file
> "org-ref-20211110.1229.tar" :async nil :error-function #f(compiled-function
> () #<bytecode 0x1f4000153e91>) :noerror nil)
> |   package-install-from-archive(#s(package-desc :name org-ref :version
> (20211110 1229) :summary "citations, cross-references and bibliographies in
> ..." :reqs ((dash (0)) (s (0)) (f (0)) (htmlize (0)) (hydra (0)) (avy (0))
> (parsebib (0)) (bibtex-completion (0)) (citeproc (0))) :kind tar :archive
> "melpa" :dir nil :extras ((:commit .
> "c87b4155cd2f60ca3a9bed2e6e366c1fa47aec33") (:authors ("John Kitchin" . "
> jkitchin@andrew.cmu.edu")) (:maintainer "John Kitchin" . "
> jkitchin@andrew.cmu.edu") (:keywords "org-mode" "cite" "ref" "label")
> (:url . "https://github.com/jkitchin/org-ref")) :signed nil))
> |   mapc(package-install-from-archive (#s(package-desc :name queue
> :version (0 2) :summary "Queue data structure" :reqs nil :kind single
> :archive "gnu" :dir nil :extras ((:keywords "extensions" "data structures"
> "queue") (:authors ("Inge Wallin" . "inge@lysator.liu.se") ("Toby Cubitt"
> . "toby-predictive@dr-qubit.org")) (:maintainer "Toby Cubitt" . "
> toby-predictive@dr-qubit.org") (:url . "http://www.dr-qubit.org/emacs.php"))
> :signed t) #s(package-desc :name citeproc :version (20211111 1008) :summary
> "A CSL 1.0.1 Citation Processor" :reqs ((emacs (25)) (dash (2 13 0)) (s (1
> 12 0)) (f (0 18 0)) (queue (0 2)) (string-inflection (1 0)) (org (9))
> (parsebib (2 4))) :kind tar :archive "melpa" :dir nil :extras ((:commit .
> "2857f9bb819d0d0a6e6ed91cc38b165e506bfc2e") (:authors ("András Simonyi" . "
> andras.simonyi@gmail.com")) (:maintainer "András Simonyi" . "
> andras.simonyi@gmail.com") (:keywords "bib") (:url . "
> https://github.com/andras-simonyi/citeproc-el")) :signed nil)
> #s(package-desc :name org-ref :version (20211110 1229) :summary "citations,
> cross-references and bibliographies in ..." :reqs ((dash (0)) (s (0)) (f
> (0)) (htmlize (0)) (hydra (0)) (avy (0)) (parsebib (0)) (bibtex-completion
> (0)) (citeproc (0))) :kind tar :archive "melpa" :dir nil :extras ((:commit
> . "c87b4155cd2f60ca3a9bed2e6e366c1fa47aec33") (:authors ("John Kitchin" . "
> jkitchin@andrew.cmu.edu")) (:maintainer "John Kitchin" . "
> jkitchin@andrew.cmu.edu") (:keywords "org-mode" "cite" "ref" "label")
> (:url . "https://github.com/jkitchin/org-ref")) :signed nil)))
> |   package-download-transaction((#s(package-desc :name queue :version (0
> 2) :summary "Queue data structure" :reqs nil :kind single :archive "gnu"
> :dir nil :extras ((:keywords "extensions" "data structures" "queue")
> (:authors ("Inge Wallin" . "inge@lysator.liu.se") ("Toby Cubitt" . "
> toby-predictive@dr-qubit.org")) (:maintainer "Toby Cubitt" . "
> toby-predictive@dr-qubit.org") (:url . "http://www.dr-qubit.org/emacs.php"))
> :signed t) #s(package-desc :name citeproc :version (20211111 1008) :summary
> "A CSL 1.0.1 Citation Processor" :reqs ((emacs (25)) (dash (2 13 0)) (s (1
> 12 0)) (f (0 18 0)) (queue (0 2)) (string-inflection (1 0)) (org (9))
> (parsebib (2 4))) :kind tar :archive "melpa" :dir nil :extras ((:commit .
> "2857f9bb819d0d0a6e6ed91cc38b165e506bfc2e") (:authors ("András Simonyi" . "
> andras.simonyi@gmail.com")) (:maintainer "András Simonyi" . "
> andras.simonyi@gmail.com") (:keywords "bib") (:url . "
> https://github.com/andras-simonyi/citeproc-el")) :signed nil)
> #s(package-desc :name org-ref :version (20211110 1229) :summary "citations,
> cross-references and bibliographies in ..." :reqs ((dash (0)) (s (0)) (f
> (0)) (htmlize (0)) (hydra (0)) (avy (0)) (parsebib (0)) (bibtex-completion
> (0)) (citeproc (0))) :kind tar :archive "melpa" :dir nil :extras ((:commit
> . "c87b4155cd2f60ca3a9bed2e6e366c1fa47aec33") (:authors ("John Kitchin" . "
> jkitchin@andrew.cmu.edu")) (:maintainer "John Kitchin" . "
> jkitchin@andrew.cmu.edu") (:keywords "org-mode" "cite" "ref" "label")
> (:url . "https://github.com/jkitchin/org-ref")) :signed nil)))
> |   package-install(#s(package-desc :name org-ref :version (20211110 1229)
> :summary "citations, cross-references and bibliographies in ..." :reqs
> ((dash (0)) (s (0)) (f (0)) (htmlize (0)) (hydra (0)) (avy (0)) (parsebib
> (0)) (bibtex-completion (0)) (citeproc (0))) :kind tar :archive "melpa"
> :dir nil :extras ((:commit . "c87b4155cd2f60ca3a9bed2e6e366c1fa47aec33")
> (:authors ("John Kitchin" . "jkitchin@andrew.cmu.edu")) (:maintainer
> "John Kitchin" . "jkitchin@andrew.cmu.edu") (:keywords "org-mode" "cite"
> "ref" "label") (:url . "https://github.com/jkitchin/org-ref")) :signed
> nil) dont-select)
> |   package-menu--perform-transaction((#s(package-desc :name
> org-ref-prettify :version (20211111 742) :summary "Prettify org-ref
> citation links" :reqs ((emacs (24 3)) (org-ref (1 1 0)) (bibtex-completion
> (1 0 0))) :kind single :archive "melpa" :dir nil :extras ((:commit .
> "0cecd7b2611bd9d282876ab46d490ce3e635ba86") (:authors ("Alex Kost" . "
> alezost@gmail.com") ("Vitus Schäfftlein" . "vitusschaefftlein@live.de"))
> (:maintainer "Alex Kost" . "alezost@gmail.com") (:keywords "convenience")
> (:url . "https://github.com/alezost/org-ref-prettify.el")) :signed nil)
> #s(package-desc :name org-ref :version (20211110 1229) :summary "citations,
> cross-references and bibliographies in ..." :reqs ((dash (0)) (s (0)) (f
> (0)) (htmlize (0)) (hydra (0)) (avy (0)) (parsebib (0)) (bibtex-completion
> (0)) (citeproc (0))) :kind tar :archive "melpa" :dir nil :extras ((:commit
> . "c87b4155cd2f60ca3a9bed2e6e366c1fa47aec33") (:authors ("John Kitchin" . "
> jkitchin@andrew.cmu.edu")) (:maintainer "John Kitchin" . "
> jkitchin@andrew.cmu.edu") (:keywords "org-mode" "cite" "ref" "label")
> (:url . "https://github.com/jkitchin/org-ref")) :signed nil)) nil)
> |   package-menu-execute()
> |   funcall-interactively(package-menu-execute)
> |   call-interactively(package-menu-execute nil nil)
> |   command-execute(package-menu-execute)
> `----
>

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