Re: jabref like orgmode based solution to bibliography management (not for latex)

[John Kitchin <jkitchin@andrew.cmu.edu>]

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Try (untested)

 (defun helm-bibtex-ikloog-publications ()
   "Search BibTeX entries authored by me"
   (interactive)
(let ((helm-bibtex-bibliography "your special bibfile"))
   (helm :sources '(helm-source-bibtex)
         :full-frame t
         :input "kloog !unpublished !prep "
         :candidate-number-limit 500)))



John

-----------------------------------
Professor John Kitchin
Doherty Hall A207F
Department of Chemical Engineering
Carnegie Mellon University
Pittsburgh, PA 15213
412-268-7803
@johnkitchin
http://kitchingroup.cheme.cmu.edu


On Sat, Dec 5, 2015 at 7:17 AM, Xebar Saram <zeltakc@gmail.com> wrote:

> Hi again Titus and list
>
> so the semester is finally nearing the end which means i finally have some
> time (and a life :)) to get back to what i partially started a few months
> ago.
>
> i have a question regarding Predefined searches. i have a search that
> works well for searching papers i authored.
> i am thinking of moving towards 2 bib files instead of 1 big one, that is
> one for my papers and one for the rest (any disadvantages of using 2 bib
> files?).
> i want to add in the Predefined search to only draw from my file (mypaper.bib),
> even though in the default helm-bibtex sources it will have 2 inputs. is
> such a thing possible?
>
> this is how a current search i have looks like
>
> #+BEGIN_SRC emacs-lisp :results none
>
>  ;; Define helm-search with predefined search expression:
>  (defun helm-bibtex-ikloog-publications ()
>    "Search BibTeX entries authored by me"
>    (interactive)
>    (helm :sources '(helm-source-bibtex)
>          :full-frame t
>          :input "kloog !unpublished !prep "
>          :candidate-number-limit 500))
> #+END_SRC
>
> how does one add the specific .bib file filter?
>
> best
>
> Z
>
> On Sun, May 31, 2015 at 7:23 PM, Titus von der Malsburg <
> malsburg@posteo.de> wrote:
>
>>
>> On 2015-05-31 Sun 03:01, Xebar Saram wrote:
>> > Thanks so much everyone for these great replies. i will investigate this
>> > further today and let everyone know how im going with my transition :)
>> >
>> > thanks again
>> >
>> > PS: Titus, do you think  that the helm-bibtex APA style reference list
>> > could be user customizable in the future?
>>
>> Depends on what you mean by customizable.  If you mean a customization
>> option to allows you to replace the function for APA formatting with
>> another function, then yes that would definitely make sense.
>>
>>   Titus
>>
>> >
>> > Z.
>> >
>> > On Sat, May 30, 2015 at 6:56 PM, John Kitchin <jkitchin@andrew.cmu.edu>
>> > wrote:
>> >
>> >>
>> >>
>> >> On Saturday, May 30, 2015, Titus von der Malsburg <malsburg@posteo.de>
>> >> wrote:
>> >>
>> >>>
>> >>> On 2015-05-30 Sat 01:20, Xebar Saram wrote:
>> >>> > Hi all
>> >>> >
>> >>> > i have been using jabref for the past 2-4 years in my academia work
>> to
>> >>> > manage my reference library. i dont use latex (..its on my TODO
>> >>> list...when
>> >>> > (f ever) i have time..) so for now i just want something to manage
>> my
>> >>> > references. the key things i need to move over from jabref are:
>> >>>
>> >>> Author of helm-bibtex here.
>> >>>
>> >>> > 1. easy add references
>> >>>
>> >>> Helm-bibtex doesn’t deal with this because I prefer to edit my BibTeX
>> >>> file by hand.  BibTeX retrieved from journals is almost always messy
>> and
>> >>> I need to edit it anyway.  It’s not too hard, though: I click on
>> BibTeX
>> >>> export on the journal page, the BibTeX file is opened in Emacs, I fix
>> >>> it, and use a command that appends it to my bibliography.
>> >>>
>> >>> However, I think org-ref has tools that do more to support importing
>> new
>> >>> entries and org-ref combines well with helm-bibtex.
>> >>
>> >>
>> >> Org-ref has doi-utils that let you add bibtex entries and download PDFs
>> >> from a doi or crossref query.
>> >>
>> >>
>> >>>
>> >>> > 2. a way to quick filter references (helm bibtex seems like a good
>> >>> solution)
>> >>>
>> >>> That’s what helm-bibtex was written to solve.
>> >>>
>> >>> > 3. filter lists based on tags/keywords (orgmode has that covered)
>> >>>
>> >>> In helm-bibtex you can also search for keywords and tags.
>> >>>
>> >>> > 4. this one is important: a way to quickly export selected
>> references in
>> >>> > word/odf/html based on a pre fixed style (ie  Nature, Chicago etc)
>> >>>
>> >>> helm-bibtex can generate references in APA style but as far as I can
>> see
>> >>> Chicago style is very similar, so it shouldn’t be hard to add support
>> >>> for that.
>> >>>
>> >>> > anyone uses such a system in emacs/org and can recommend the way to
>> >>> > go?
>> >>>
>> >>> For more details, see: https://github.com/tmalsburg/helm-bibtex
>> >>>
>> >>>   Titus
>> >>>
>> >>>
>> >>
>> >> --
>> >> John
>> >>
>> >> -----------------------------------
>> >> Professor John Kitchin
>> >> Doherty Hall A207F
>> >> Department of Chemical Engineering
>> >> Carnegie Mellon University
>> >> Pittsburgh, PA 15213
>> >> 412-268-7803
>> >> @johnkitchin
>> >> http://kitchingroup.cheme.cmu.edu
>> >>
>> >>
>> >>
>>
>>
>

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