Thanks for your suggestion, I solved the problem using:
#+headers: :results output latex
#+begin_src R :session *R* :exports results
...
print(xtable(summary(mypca)))
#+end_src
Regards
Riccardo
Hi Riccardo,Christophe Pouzat <christophe.pouzat@gmail.com> writes:
> Sorry,
>
> Checking foo.org
> (http://orgmode.org/w/?p=worg.git;a=blob_plain;f=org-contrib/babel/examples/foo.org;hb=HEAD)
> I got the correct way to do it:
>
> #+begin_src R :results output latex :exports results
> library(xtable)
> xtable(foo, caption = "ANOVA Table", label = "tab:one",
> digits = c(0, 0, 2, 0, 2, 3, 3))
> #+end_src
>
> Does it solve your problem?
>
> Christophe
>
> Riccardo Romoli <ric.romoli@gmail.com> writes:
>
>> If I set :export latex when I exports to LaTeX I have only the R code, not the
>> table.
>>
>> Best
>>
>> 2012/2/14 Christophe Pouzat <christophe.pouzat@gmail.com>
>>
>> Riccardo Romoli <ric.romoli@gmail.com> writes:
>>
>> > Hi, I work with org-babel and R.
>> > In the R session I create a table that I have to export to LaTeX.
>> > This is the code I use:
>> >
>> > #+headers: :results latex
>> > #+begin_src R :session *R* :exports results
>> > .....
>> > print(xtable(summary(mypca)))
>> > #+end_src
>> >
>> > I do not understand why the exported table is delimited by "|":
>> >
>> > |% latex table generated in R 2.14.1 by xtable 1.6-0 package |
>> > | % Tue Feb 14 16:21:48 2012 |
>> > | \begin{table}[ht] |
>> > | \begin{center} |
>> > | \begin{tabular}{rrrrrrrrrrrrrrrrr} |
>> > | \hline |
>> > | & PC1 & PC2 & PC3 & PC4 & PC5 & PC6 & PC7 & PC8 & PC9 & PC10 &
>> > PC11 & PC12 & PC13 & PC14 & PC15 & PC16 \\ |
>> > | \hline |
>> > | Standard deviation & 3.4693 & 2.8113 & 2.5561 & 2.2668 &
>> > 2.0015 & 1.9236 & 1.7287 & 1.6220 & 1.4288 & 1.3456 & 1.2596 &
>> > 1.2195 & 1.1278 & 1.0778 & 0.8390 & 0.0000 \\ |
>> > | Proportion of Variance & 0.2188 & 0.1437 & 0.1188 & 0.0934 &
>> > 0.0728 & 0.0673 & 0.0543 & 0.0478 & 0.0371 & 0.0329 & 0.0289 &
>> > 0.0270 & 0.0231 & 0.0211 & 0.0128 & 0.0000 \\ |
>> > | Cumulative Proportion & 0.2188 & 0.3625 & 0.4813 & 0.5747 &
>> > 0.6476 & 0.7149 & 0.7692 & 0.8170 & 0.8541 & 0.8871 & 0.9159 &
>> > 0.9429 & 0.9661 & 0.9872 & 1.0000 & 1.0000 \\ |
>> > | \hline |
>> > | \end{tabular} |
>> > | \end{center} |
>> > | \end{table} |
>> > | |
>> >
>> > Should I change some headers settings??
>> >
>> > Best
>> >
>>
>> Hi Riccardo,
>>
>> Try ":exports latex" instead of ":exports results"
>>
>> Christophe
>> --
>>
>> Most people are not natural-born statisticians. Left to our own
>> devices we are not very good at picking out patterns from a sea of
>> noisy data. To put it another way, we are all too good at picking out
>> non-existent patterns that happen to suit our purposes.
>> Bradley Efron & Robert Tibshirani (1993) An Introduction to the Bootstrap
>>
>> --
>>
>> Christophe Pouzat
>> MAP5 - Mathématiques Appliquées à Paris 5
>> CNRS UMR 8145
>> 45, rue des Saints-Pères
>> 75006 PARIS
>> France
>>
>> tel: +33142863828
>> mobile: +33662941034
>> web: http://www.biomedicale.univ-paris5.fr/physcerv/C_Pouzat.html
>>
>>
additionally, if you do not want to get too tightly bound to LaTeX, check
out the ascii-package, e.g.
#+begin_src R :results output org wrap :exports results
library(ascii)
## from the lm help page:
ctl <- c(4.17,5.58,5.18,6.11,4.50,4.61,5.17,4.53,5.33,5.14)
trt <- c(4.81,4.17,4.41,3.59,5.87,3.83,6.03,4.89,4.32,4.69)
group <- gl(2,10,20, labels=c("Ctl","Trt"))
weight <- c(ctl, trt)
lm.D9 <- lm(weight ~ group)
lm.D90 <- lm(weight ~ group - 1) # omitting intercept
print(ascii(anova(lm.D9)), type="org")
#+end_src
Cheers,
Andreas