From mboxrd@z Thu Jan 1 00:00:00 1970 From: Rainer M Krug Subject: Re: Error when editing source code with Cc ' Date: Thu, 13 Dec 2012 14:56:16 +0100 Message-ID: References: Mime-Version: 1.0 Content-Type: multipart/alternative; boundary=14dae9d253b45cef2804d0bc477c Return-path: Received: from eggs.gnu.org ([208.118.235.92]:46163) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1Tj9Gt-0002V5-LY for emacs-orgmode@gnu.org; Thu, 13 Dec 2012 08:56:22 -0500 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1Tj9Gr-0003IY-Go for emacs-orgmode@gnu.org; Thu, 13 Dec 2012 08:56:19 -0500 Received: from mail-vb0-f41.google.com ([209.85.212.41]:41631) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1Tj9Gr-0003IS-AG for emacs-orgmode@gnu.org; Thu, 13 Dec 2012 08:56:17 -0500 Received: by mail-vb0-f41.google.com with SMTP id l22so2300836vbn.0 for ; Thu, 13 Dec 2012 05:56:16 -0800 (PST) In-Reply-To: List-Id: "General discussions about Org-mode." List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: emacs-orgmode-bounces+geo-emacs-orgmode=m.gmane.org@gnu.org Sender: emacs-orgmode-bounces+geo-emacs-orgmode=m.gmane.org@gnu.org To: emacs-orgmode --14dae9d253b45cef2804d0bc477c Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: quoted-printable Solved - upgraded ESS from 12.04 to 12.09 and it is now working. Thanks, Rainer On 13 December 2012 14:49, Rainer M Krug wrote: > Hi > > when I want to edit an R source block, I get the following error, but the > indirect buffer opens: > > org-mode fontification error [6 times] > byte-code: Language mode `R-mode' fails with: hs-minor-mode > > But after this, Cc ' does not work anymore to close this buffer. > > It works for sh > > Ess is installed and is working. > > Any suggestions? > > Rainer > > > > Emacs : GNU Emacs 24.2.1 (i686-pc-linux-gnu, GTK+ Version 2.24.13) > of 2012-11-06 on dubnium, modified by Debian > Package: Org-mode version 7.9.2 (release_7.9.2-695-g31d24a @ > /home/rkrug/.emacs.d/org-mode/lisp/) > > current state: > =3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D > (setq > org-ctrl-c-ctrl-c-hook '(org-babel-hash-at-point > org-babel-execute-safely-maybe) > org-export-latex-packages-alist '(("" "color") ("" "listings")) > org-src-fontify-natively t > org-plantuml-jar-path "/home/rkrug/jar/plantuml.jar" > org-export-kill-product-buffer-when-displayed t > org-ellipsis "=E3=80=96 =E2=9C=8E =E3=80=97" > org-export-preprocess-before-selecting-backend-code-hook > '(org-beamer-select-beamer-code) > org-tab-first-hook '(org-hide-block-toggle-maybe > org-src-native-tab-command-maybe > org-babel-hide-result-toggle-maybe org-babel-header-arg-expand) > org-cycle-hook '(org-cycle-hide-archived-subtrees org-cycle-hide-drawers > org-cycle-hide-inline-tasks org-cycle-show-empty-lines > org-optimize-window-after-visibility-change) > org-agenda-before-write-hook '(org-agenda-add-entry-text) > org-confirm-babel-evaluate nil > org-speed-command-hook '(org-speed-command-default-hook > org-babel-speed-command-hook) > org-src-window-setup 'current-window > org-babel-pre-tangle-hook '(save-buffer) > org-occur-hook '(org-first-headline-recenter) > org-structure-template-alist '(("lua" "#+begin_src lua \n ?\n#+end_src" > "\n\n") > ("r" "#+begin_src R ?\n\n#+end_src" "\n\n") > ("s" "#+BEGIN_SRC ?\n\n#+END_SRC" "\n\n") > ("e" "#+BEGIN_EXAMPLE\n?\n#+END_EXAMPLE" > "\n?\n") > ("q" "#+BEGIN_QUOTE\n?\n#+END_QUOTE" "\n?\n") > ("v" "#+BEGIN_VERSE\n?\n#+END_VERSE" "\n?\n") > ("c" "#+BEGIN_CENTER\n?\n#+END_CENTER" "
\n?\n
") > ("l" "#+BEGIN_LaTeX\n?\n#+END_LaTeX" > "\n?\n") > ("L" "#+LaTeX: " "?") > ("h" "#+BEGIN_HTML\n?\n#+END_HTML" > "\n?\n") > ("H" "#+HTML: " "?") > ("a" "#+BEGIN_ASCII\n?\n#+END_ASCII") ("A" "#+ASCII: ") > ("i" "#+INDEX: ?" "#+INDEX: ?") > ("I" "#+INCLUDE: %file ?" "")) > org-metaup-hook '(org-babel-load-in-session-maybe) > org-confirm-elisp-link-function 'yes-or-no-p > org-export-latex-format-toc-function 'org-export-latex-format-toc-defaul= t > org-hide-leading-stars t > org-export-preprocess-before-normalizing-links-hook > '(org-remove-file-link-modifiers) > org-ctrl-k-protect-subtree "ask" > org-clock-out-hook '(org-clock-remove-empty-clock-drawer) > org-export-first-hook '(org-beamer-initialize-open-trackers) > org-mode-hook '((lambda nil (local-set-key " \357" (quote > org-mime-org-buffer-htmlize))) > #[nil "\300\301\302\303\304$\207" > [org-add-hook change-major-mode-hook org-show-block-all append local] > 5] > #[nil "\300\301\302\303\304$\207" > [org-add-hook change-major-mode-hook org-babel-show-result-all append > local] 5] > org-babel-result-hide-spec org-babel-hide-all-hashes) > org-directory "~/Documents/orgfiles" > org-from-is-user-regexp "\\" > org-export-latex-final-hook '(org-beamer-amend-header org-beamer-fix-toc > org-beamer-auto-fragile-frames > org-beamer-place-default-actions-for-lists) > org-export-latex-listings t > org-export-latex-after-initial-vars-hook '(org-beamer-after-initial-vars= ) > org-metadown-hook '(org-babel-pop-to-session-maybe) > org-startup-indented t > org-src-mode-hook '(org-src-babel-configure-edit-buffer > org-src-mode-configure-edit-buffer) > org-after-todo-state-change-hook '(org-clock-out-if-current) > org-babel-tangle-lang-exts '(("latex" . "tex") ("emacs-lisp" . "el")) > org-confirm-shell-link-function 'y-or-n-p > ) > > -- > Rainer M. Krug, PhD (Conservation Ecology, SUN), MSc (Conservation > Biology, UCT), Dipl. Phys. (Germany) > > Centre of Excellence for Invasion Biology > Stellenbosch University > South Africa > > Tel : +33 - (0)9 53 10 27 44 > Cell: +33 - (0)6 85 62 59 98 > Fax (F): +33 - (0)9 58 10 27 44 > > Fax (D): +49 - (0)3 21 21 25 22 44 > > email: Rainer@krugs.de > > Skype: RMkrug > > --=20 Rainer M. Krug, PhD (Conservation Ecology, SUN), MSc (Conservation Biology, UCT), Dipl. Phys. (Germany) Centre of Excellence for Invasion Biology Stellenbosch University South Africa Tel : +33 - (0)9 53 10 27 44 Cell: +33 - (0)6 85 62 59 98 Fax (F): +33 - (0)9 58 10 27 44 Fax (D): +49 - (0)3 21 21 25 22 44 email: Rainer@krugs.de Skype: RMkrug --14dae9d253b45cef2804d0bc477c Content-Type: text/html; charset=UTF-8 Content-Transfer-Encoding: quoted-printable Solved - upgraded ESS from 12.04 to 12.09 and it is now working.

Thanks,

Rainer


On 13 December 2012 14:49, Rainer = M Krug <r.m.krug@gmail.com> wrote:
Hi

when I want to edit an= R source block, I get the following error, but the indirect buffer opens:<= /div>

org-mode fontification error [6 times]
byte-code: Language mode `R-mode' fails with: hs-minor-mode

But after this, Cc ' does not work anymore to= close this buffer.

It works for sh

=
Ess is installed and is working.

Any su= ggestions?

Rainer


Emacs =C2=A0: GNU Emacs 24.2.1 (i686-pc-linux-gnu, GTK+ Version= 2.24.13)
=C2=A0of 2012-11-06 on dubnium, modified by Debian
Package: Org-mode version 7.9.2 (release_7.9.2-695-g31d24a @ /home/rkrug/.e= macs.d/org-mode/lisp/)

current state:
= =3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D
(setq
=C2=A0= org-ctrl-c-ctrl-c-hook '(org-babel-hash-at-point org-babel-execute-safe= ly-maybe)
=C2=A0org-export-latex-packages-alist '(("" "color&= quot;) ("" "listings"))
=C2=A0org-src-fontify= -natively t
=C2=A0org-plantuml-jar-path "/home/rkrug/jar/pla= ntuml.jar"
=C2=A0org-export-kill-product-buffer-when-displayed t
=C2=A0= org-ellipsis "=E3=80=96 =E2=9C=8E =E3=80=97"
=C2=A0org-= export-preprocess-before-selecting-backend-code-hook '(org-beamer-selec= t-beamer-code)
=C2=A0org-tab-first-hook '(org-hide-block-togg= le-maybe org-src-native-tab-command-maybe
=C2=A0 =C2=A0 =C2=A0org= -babel-hide-result-toggle-maybe org-babel-header-arg-expand)
=C2= =A0org-cycle-hook '(org-cycle-hide-archived-subtrees org-cycle-hide-dra= wers
=C2=A0org-cycle-hide-inline-= tasks org-cycle-show-empty-lines
=C2=A0org-optimize-window-after-visibility-change)
=C2=A0org-agenda-before-write-hook '(org-agenda-add-entry-text)
=C2=A0org-confirm-babel-evaluate nil
=C2=A0org-speed-command= -hook '(org-speed-command-default-hook org-babel-speed-command-hook)
=C2=A0org-src-window-setup 'current-window
=C2=A0org-= babel-pre-tangle-hook '(save-buffer)
=C2=A0org-occur-hook '(org-first-headline-recenter)
=C2= =A0org-structure-template-alist '(("lua" "#+begin_src lu= a \n =C2=A0?\n#+end_src"
"<src lang=3D\"lua\">\n\n</src>&qu= ot;)
("r" "#= +begin_src R ?\n\n#+end_src" "<src lang=3D\"R\">\= n\n</src>")
<= /span>("s" "#+BEGIN_SRC ?\n\n#+END_SRC" "<src l= ang=3D\"?\">\n\n</src>")
("e" "#= +BEGIN_EXAMPLE\n?\n#+END_EXAMPLE"
"<example>\n?\n</example>")
("q" "#= +BEGIN_QUOTE\n?\n#+END_QUOTE" "<quote>\n?\n</quote>&q= uot;)
("v&qu= ot; "#+BEGIN_VERSE\n?\n#+END_VERSE" "<verse>\n?\n</= verse>")
("c" "#= +BEGIN_CENTER\n?\n#+END_CENTER" "<center>\n?\n</center&g= t;")
("= l" "#+BEGIN_LaTeX\n?\n#+END_LaTeX"
"<literal sty= le=3D\"latex\">\n?\n</literal>")
("L" "#+LaTeX: "= ; "<literal style=3D\"latex\">?</literal>")=
("h" "#= +BEGIN_HTML\n?\n#+END_HTML"
"<literal style=3D\"html\">\n?\n</= literal>")
("H" "#= +HTML: " "<literal style=3D\"html\">?</literal= >")
(&quo= t;a" "#+BEGIN_ASCII\n?\n#+END_ASCII") ("A" "#= +ASCII: ")
("i" "#= +INDEX: ?" "#+INDEX: ?")
("I" "#+INCLUDE: %file ?" "= <include file=3D%file markup=3D\"?\">"))
=C2=A0org-metaup-hook '(org-babel-load-in-session-maybe)
=C2=A0org-confirm-elisp-link-function 'yes-or-no-p
=C2=A0org= -export-latex-format-toc-function 'org-export-latex-format-toc-default<= /div>
=C2=A0org-hide-leading-stars t
=C2=A0org-export-preprocess-before-normalizing-links-hook '(org-re= move-file-link-modifiers)
=C2=A0org-ctrl-k-protect-subtree "= ask"
=C2=A0org-clock-out-hook '(org-clock-remove-empty-c= lock-drawer)
=C2=A0org-export-first-hook '(org-beamer-initialize-open-trackers)=
=C2=A0org-mode-hook '((lambda nil (local-set-key " \357= " (quote org-mime-org-buffer-htmlize)))
#[nil "\300\301\302\303\304$\207"
=C2=A0 [org-add-hook ch= ange-major-mode-hook org-show-block-all append local] 5]
#[nil "\300\301\302\303\304$\20= 7"
=C2=A0 [org-add-hook ch= ange-major-mode-hook org-babel-show-result-all append local] 5]
<= span style=3D"white-space:pre-wrap"> org-babel-result-hide-spec or= g-babel-hide-all-hashes)
=C2=A0org-directory "~/Documents/orgfiles"
=C2=A0o= rg-from-is-user-regexp "\\<Rainer M Krug\\>"
=C2= =A0org-export-latex-final-hook '(org-beamer-amend-header org-beamer-fix= -toc
=C2=A0 =C2=A0 =C2=A0 org-be= amer-auto-fragile-frames
= =C2=A0 =C2=A0 =C2=A0 org-beamer-place-default-actions-for-lists)
=C2=A0org-export-latex-listings t
=C2=A0org-export-latex-after-initial-vars-hook '(org-beamer-after-= initial-vars)
=C2=A0org-metadown-hook '(org-babel-pop-to-sess= ion-maybe)
=C2=A0org-startup-indented t
=C2=A0org-src-m= ode-hook '(org-src-babel-configure-edit-buffer org-src-mode-configure-e= dit-buffer)
=C2=A0org-after-todo-state-change-hook '(org-clock-out-if-current)=
=C2=A0org-babel-tangle-lang-exts '(("latex" . &quo= t;tex") ("emacs-lisp" . "el"))
=C2=A0org= -confirm-shell-link-function 'y-or-n-p
=C2=A0)

--
Rainer M. Krug, PhD (Conserva= tion Ecology, SUN), MSc (Conservation Biology, UCT), Dipl. Phys. (Germany)<= br>
Centre of Excellence for Invasion Biology
Stellenbosch University=
South Africa

Tel : =C2=A0 =C2=A0 =C2=A0 +33 -= (0)9 53 10 27 44
Cell: =C2=A0 =C2=A0 =C2=A0 = +33 - (0)6 85 62 59 98
Fax (F): =C2=A0 =C2=A0 =C2=A0 +33 - (0)9 58 10 27 44=

Fax (D): =C2=A0 =C2=A0+49 - (0)3 = 21 21 25 22 44

email: =C2=A0 =C2=A0 =C2=A0Rainer@krugs.de

Skype: =C2=A0 =C2=A0 =C2=A0RMkrug




--
Rainer M. Kr= ug, PhD (Conservation Ecology, SUN), MSc (Conservation Biology, UCT), Dipl.= Phys. (Germany)

Centre of Excellence for Invasion Biology
Stelle= nbosch University
South Africa

Tel : =C2=A0 =C2=A0 =C2=A0 +33 - (0)9 53 10 27 44
Ce= ll: =C2=A0 =C2=A0 =C2=A0 +33 - (0)6 85 62 59 98
Fax (F): =C2=A0 =C2=A0 = =C2=A0 +33 - (0)9 58 10 27 44

Fax (D): =C2=A0 =C2=A0+49 - (0)3 21 21= 25 22 44

email: =C2=A0 =C2=A0 =C2=A0Rainer@krugs.de

Skype: =C2=A0 =C2=A0 =C2=A0RMkrug

--14dae9d253b45cef2804d0bc477c--