From: Kyle Andrews <kyle.c.andrews@gmail.com>
To: Jack Kamm <jackkamm@gmail.com>
Cc: Emacs orgmode <emacs-orgmode@gnu.org>
Subject: Re: [RFC] ob-reticulate: R+Python interface from Babel
Date: Tue, 25 Aug 2020 19:34:08 -0400 [thread overview]
Message-ID: <CAG3md+tp6ji-5Rv4eAMBek878Ow-=QCB4XhbzUHxr9W_sLEeVw@mail.gmail.com> (raw)
In-Reply-To: <875z98gj4f.fsf@gmail.com>
[-- Attachment #1: Type: text/plain, Size: 1812 bytes --]
Hi Jack,
As a frequent reticulate user I am very excited to see this patch. I hope
others feel the same and it gets included into org mode as I cannot wait to
use it.
Best Regards,
Kyle
On Mon, Aug 24, 2020, 11:28 Jack Kamm <jackkamm@gmail.com> wrote:
> Hi all,
>
> Reticulate is an R package for interfacing between R and Python. It allows
> accessing objects in a Python session from R and vice versa. See
> https://rstudio.github.io/reticulate/ for more info about it.
>
> I've written a small patch for using reticulate from org-babel. It allows
> creating a source block of lang "reticulate", which behaves as Python for
> font highlighting and editing, but is executed in an R session via
> reticulate.
>
> I'm wondering whether this should go into org-mode, or whether to package
> this separately. I'm also curious whether this would be useful to anyone
> here. Any feedback is appreciated.
>
> The main advantage of reticulate is being able to access Python objects
> directly from R and vice versa, without having to write them to a separate
> file or pass them through the ":var" header argument. For example, we could
> do the following:
>
> #+begin_src reticulate :session
> import pandas as pd
>
> fib = [0, 1]
> for _ in range(10):
> fib.append(fib[-1] + fib[-2])
>
> df = pd.DataFrame({
> "i": list(range(len(fib))),
> "F_i": fib
> })
> #+end_src
>
> #+begin_src R :session :results graphics value file :file fig.png
> library(reticulate)
> with(py$df, plot(i, F_i))
> #+end_src
>
> Reticulate source blocks support both "value" and "output" results, and
> even supports graphics with matplotlib. It's primarily intended to be used
> in sessions, and the ":session" header argument should match between
> reticulate and R source blocks.
>
> Cheers,
> Jack
>
>
[-- Attachment #2: Type: text/html, Size: 2465 bytes --]
next prev parent reply other threads:[~2020-08-25 23:34 UTC|newest]
Thread overview: 8+ messages / expand[flat|nested] mbox.gz Atom feed top
2020-08-24 15:26 [RFC] ob-reticulate: R+Python interface from Babel Jack Kamm
2020-08-25 23:34 ` Kyle Andrews [this message]
2020-08-29 13:23 ` Kyle Meyer
2020-09-04 7:14 ` Bastien
2020-10-12 4:15 ` Jack Kamm
2021-02-27 14:15 ` Jack Kamm
2021-02-27 17:24 ` Jeremie Juste
2021-03-02 23:52 ` Jack Kamm
Reply instructions:
You may reply publicly to this message via plain-text email
using any one of the following methods:
* Save the following mbox file, import it into your mail client,
and reply-to-all from there: mbox
Avoid top-posting and favor interleaved quoting:
https://en.wikipedia.org/wiki/Posting_style#Interleaved_style
List information: https://www.orgmode.org/
* Reply using the --to, --cc, and --in-reply-to
switches of git-send-email(1):
git send-email \
--in-reply-to='CAG3md+tp6ji-5Rv4eAMBek878Ow-=QCB4XhbzUHxr9W_sLEeVw@mail.gmail.com' \
--to=kyle.c.andrews@gmail.com \
--cc=emacs-orgmode@gnu.org \
--cc=jackkamm@gmail.com \
/path/to/YOUR_REPLY
https://kernel.org/pub/software/scm/git/docs/git-send-email.html
* If your mail client supports setting the In-Reply-To header
via mailto: links, try the mailto: link
Be sure your reply has a Subject: header at the top and a blank line
before the message body.
Code repositories for project(s) associated with this public inbox
https://git.savannah.gnu.org/cgit/emacs/org-mode.git
This is a public inbox, see mirroring instructions
for how to clone and mirror all data and code used for this inbox;
as well as URLs for read-only IMAP folder(s) and NNTP newsgroup(s).