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* Bug: org-babel python with :results value sends function definition with a statement after a for loop to the shell incorrectly [9.3.6 (9.3.6-elpa @ /home/username/.emacs.d/elpa/org-9.3.6/)]
@ 2020-07-01 16:55 Philip Blagoveschensky
  2020-07-01 18:48 ` Andreas Röhler
  2020-07-01 19:05 ` ian martins
  0 siblings, 2 replies; 9+ messages in thread
From: Philip Blagoveschensky @ 2020-07-01 16:55 UTC (permalink / raw)
  To: emacs-orgmode

Consider the following org-babel block:



#+begin_src python :session bug_report
def foobar():
     for i in range(5):
         pass
     print "hello world"

foobar()
#+end_src



When I run it, this is what I see in the *bug_report* buffer:



def foobar():
...     for i in range(5):
...         pass
...
>>>     print "hello world"
   File "<stdin>", line 1
     print "hello world"
     ^
IndentationError: unexpected indent

>>> foobar()
>>>
>>> open('/tmp/babel-MOOCF9/python-UW5PEF', 'w').write(str(_))
>>>
>>>
>>> 'org_babel_python_eoe'
>>> 'org_babel_python_eoe'
>>>



So, org-babel incorrectly decided that the line with the print is not a 
part of the function's definition and sent it to Python shell as a 
separate statement. Instead, it should've sent it as a part of foobar's 
definition.

This problem persists
- If I use python3 instead of python2
- If I replace
     print "hello world"
   with
     return 42

This problem disappears if I add :results output to the source block.


Emacs  : GNU Emacs 26.1 (build 2, x86_64-pc-linux-gnu, GTK+ Version 3.24.5)
  of 2019-09-23, modified by Debian
Package: Org mode version 9.3.6 (9.3.6-elpa @ 
/home/username/.emacs.d/elpa/org-9.3.6/)


current state:
==============
(setq
  org-src-mode-hook '(org-src-babel-configure-edit-buffer
		     org-src-mode-configure-edit-buffer)
  org-link-shell-confirm-function 'yes-or-no-p
  org-metadown-hook '(org-babel-pop-to-session-maybe)
  org-clock-out-hook '(org-clock-remove-empty-clock-drawer)
  org-mode-hook '(#[0 "\300\301\302\303\304$\207"
		   [add-hook change-major-mode-hook org-show-all append
		    local]
		   5]
		 #[0 "\300\301\302\303\304$\207"
		   [add-hook change-major-mode-hook
		    org-babel-show-result-all append local]
		   5]
		 org-babel-result-hide-spec org-babel-hide-all-hashes)
  org-archive-hook '(org-attach-archive-delete-maybe)
  org-confirm-elisp-link-function 'yes-or-no-p
  org-agenda-before-write-hook '(org-agenda-add-entry-text)
  org-metaup-hook '(org-babel-load-in-session-maybe)
  org-bibtex-headline-format-function #[257 "\300\x01\236A\207" [:title] 3 
"\n\n(fn ENTRY)"]
  org-babel-pre-tangle-hook '(save-buffer)
  org-tab-first-hook '(org-babel-hide-result-toggle-maybe
		      org-babel-header-arg-expand)
  org-babel-load-languages '((emacs-lisp . t) (python . t))
  org-occur-hook '(org-first-headline-recenter)
  org-cycle-hook '(org-cycle-hide-archived-subtrees
		  org-cycle-show-empty-lines
		  org-optimize-window-after-visibility-change)
  org-speed-command-hook '(org-speed-command-activate
			  org-babel-speed-command-activate)
  org-babel-tangle-lang-exts '(("python" . "py") ("emacs-lisp" . "el")
			      ("elisp" . "el"))
  org-confirm-shell-link-function 'yes-or-no-p
  org-link-parameters '(("attachment" :follow org-attach-open-link :export
			org-attach-export-link :complete
			org-attach-complete-link)
		       ("id" :follow org-id-open)
		       ("eww" :follow eww :store org-eww-store-link)
		       ("rmail" :follow org-rmail-open :store
			org-rmail-store-link)
		       ("mhe" :follow org-mhe-open :store
			org-mhe-store-link)
		       ("irc" :follow org-irc-visit :store
			org-irc-store-link :export org-irc-export)
		       ("info" :follow org-info-open :export
			org-info-export :store org-info-store-link)
		       ("gnus" :follow org-gnus-open :store
			org-gnus-store-link)
		       ("docview" :follow org-docview-open :export
			org-docview-export :store org-docview-store-link)
		       ("bibtex" :follow org-bibtex-open :store
			org-bibtex-store-link)
		       ("bbdb" :follow org-bbdb-open :export
			org-bbdb-export :complete org-bbdb-complete-link
			:store org-bbdb-store-link)
		       ("w3m" :store org-w3m-store-link) ("file+sys")
		       ("file+emacs")
		       ("shell" :follow org-link--open-shell)
		       ("news" :follow
			#[257 "\301\300\302\x03Q!\207"
			  ["news" browse-url ":"] 5 "\n\n(fn URL)"]
			)
		       ("mailto" :follow
			#[257 "\301\300\302\x03Q!\207"
			  ["mailto" browse-url ":"] 5 "\n\n(fn URL)"]
			)
		       ("https" :follow
			#[257 "\301\300\302\x03Q!\207"
			  ["https" browse-url ":"] 5 "\n\n(fn URL)"]
			)
		       ("http" :follow
			#[257 "\301\300\302\x03Q!\207"
			  ["http" browse-url ":"] 5 "\n\n(fn URL)"]
			)
		       ("ftp" :follow
			#[257 "\301\300\302\x03Q!\207"
			  ["ftp" browse-url ":"] 5 "\n\n(fn URL)"]
			)
		       ("help" :follow org-link--open-help)
		       ("file" :complete org-link-complete-file)
		       ("elisp" :follow org-link--open-elisp)
		       ("doi" :follow org-link--open-doi))
  org-link-elisp-confirm-function 'yes-or-no-p
  )



^ permalink raw reply	[flat|nested] 9+ messages in thread
* Bug: org-babel python with :results value sends function definition with a statement after a for loop to the shell incorrectly [9.3.6 (9.3.6-elpa @ /home/username/.emacs.d/elpa/org-9.3.6/)]
@ 2020-06-30 11:09 Philip Blagoveschensky
  2020-07-06 12:57 ` ian martins
  0 siblings, 1 reply; 9+ messages in thread
From: Philip Blagoveschensky @ 2020-06-30 11:09 UTC (permalink / raw)
  To: emacs-orgmode

Consider the following org-babel block:



#+begin_src python :session bug_report
def foobar():
     for i in range(5):
         pass
     print "hello world"

foobar()
#+end_src



When I run it, this is what I see in the *bug_report* buffer:



def foobar():
...     for i in range(5):
...         pass
...
 >>>     print "hello world"
   File "<stdin>", line 1
     print "hello world"
     ^
IndentationError: unexpected indent

 >>> foobar()
 >>>
 >>> open('/tmp/babel-MOOCF9/python-UW5PEF', 'w').write(str(_))
 >>>
 >>>
 >>> 'org_babel_python_eoe'
 >>> 'org_babel_python_eoe'
 >>>



So, org-babel incorrectly decided that the line with the print is not a 
part of the function's definition and sent it to Python shell as a 
separate statement. Instead, it should've sent it as a part of foobar's 
definition.

This problem persists
- If I use python3 instead of python2
- If I replace
     print "hello world"
   with
     return 42

This problem disappears if I add :results output to the source block.


Emacs  : GNU Emacs 26.1 (build 2, x86_64-pc-linux-gnu, GTK+ Version 3.24.5)
  of 2019-09-23, modified by Debian
Package: Org mode version 9.3.6 (9.3.6-elpa @ 
/home/username/.emacs.d/elpa/org-9.3.6/)


current state:
==============
(setq
  org-src-mode-hook '(org-src-babel-configure-edit-buffer
		     org-src-mode-configure-edit-buffer)
  org-link-shell-confirm-function 'yes-or-no-p
  org-metadown-hook '(org-babel-pop-to-session-maybe)
  org-clock-out-hook '(org-clock-remove-empty-clock-drawer)
  org-mode-hook '(#[0 "\300\301\302\303\304$\207"
		   [add-hook change-major-mode-hook org-show-all append
		    local]
		   5]
		 #[0 "\300\301\302\303\304$\207"
		   [add-hook change-major-mode-hook
		    org-babel-show-result-all append local]
		   5]
		 org-babel-result-hide-spec org-babel-hide-all-hashes)
  org-archive-hook '(org-attach-archive-delete-maybe)
  org-confirm-elisp-link-function 'yes-or-no-p
  org-agenda-before-write-hook '(org-agenda-add-entry-text)
  org-metaup-hook '(org-babel-load-in-session-maybe)
  org-bibtex-headline-format-function #[257 "\300\x01\236A\207" [:title] 3 
"\n\n(fn ENTRY)"]
  org-babel-pre-tangle-hook '(save-buffer)
  org-tab-first-hook '(org-babel-hide-result-toggle-maybe
		      org-babel-header-arg-expand)
  org-babel-load-languages '((emacs-lisp . t) (python . t))
  org-occur-hook '(org-first-headline-recenter)
  org-cycle-hook '(org-cycle-hide-archived-subtrees
		  org-cycle-show-empty-lines
		  org-optimize-window-after-visibility-change)
  org-speed-command-hook '(org-speed-command-activate
			  org-babel-speed-command-activate)
  org-babel-tangle-lang-exts '(("python" . "py") ("emacs-lisp" . "el")
			      ("elisp" . "el"))
  org-confirm-shell-link-function 'yes-or-no-p
  org-link-parameters '(("attachment" :follow org-attach-open-link :export
			org-attach-export-link :complete
			org-attach-complete-link)
		       ("id" :follow org-id-open)
		       ("eww" :follow eww :store org-eww-store-link)
		       ("rmail" :follow org-rmail-open :store
			org-rmail-store-link)
		       ("mhe" :follow org-mhe-open :store
			org-mhe-store-link)
		       ("irc" :follow org-irc-visit :store
			org-irc-store-link :export org-irc-export)
		       ("info" :follow org-info-open :export
			org-info-export :store org-info-store-link)
		       ("gnus" :follow org-gnus-open :store
			org-gnus-store-link)
		       ("docview" :follow org-docview-open :export
			org-docview-export :store org-docview-store-link)
		       ("bibtex" :follow org-bibtex-open :store
			org-bibtex-store-link)
		       ("bbdb" :follow org-bbdb-open :export
			org-bbdb-export :complete org-bbdb-complete-link
			:store org-bbdb-store-link)
		       ("w3m" :store org-w3m-store-link) ("file+sys")
		       ("file+emacs")
		       ("shell" :follow org-link--open-shell)
		       ("news" :follow
			#[257 "\301\300\302\x03Q!\207"
			  ["news" browse-url ":"] 5 "\n\n(fn URL)"]
			)
		       ("mailto" :follow
			#[257 "\301\300\302\x03Q!\207"
			  ["mailto" browse-url ":"] 5 "\n\n(fn URL)"]
			)
		       ("https" :follow
			#[257 "\301\300\302\x03Q!\207"
			  ["https" browse-url ":"] 5 "\n\n(fn URL)"]
			)
		       ("http" :follow
			#[257 "\301\300\302\x03Q!\207"
			  ["http" browse-url ":"] 5 "\n\n(fn URL)"]
			)
		       ("ftp" :follow
			#[257 "\301\300\302\x03Q!\207"
			  ["ftp" browse-url ":"] 5 "\n\n(fn URL)"]
			)
		       ("help" :follow org-link--open-help)
		       ("file" :complete org-link-complete-file)
		       ("elisp" :follow org-link--open-elisp)
		       ("doi" :follow org-link--open-doi))
  org-link-elisp-confirm-function 'yes-or-no-p
  )



^ permalink raw reply	[flat|nested] 9+ messages in thread

end of thread, other threads:[~2020-10-10 23:57 UTC | newest]

Thread overview: 9+ messages (download: mbox.gz follow: Atom feed
-- links below jump to the message on this page --
2020-07-01 16:55 Bug: org-babel python with :results value sends function definition with a statement after a for loop to the shell incorrectly [9.3.6 (9.3.6-elpa @ /home/username/.emacs.d/elpa/org-9.3.6/)] Philip Blagoveschensky
2020-07-01 18:48 ` Andreas Röhler
2020-07-01 19:05 ` ian martins
  -- strict thread matches above, loose matches on Subject: below --
2020-06-30 11:09 Philip Blagoveschensky
2020-07-06 12:57 ` ian martins
2020-07-06 19:18   ` Philip Blagoveschensky
2020-07-07 11:31     ` ian martins
2020-07-19 15:33       ` Jack Kamm
2020-10-10 23:57         ` Jack Kamm

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