emacs-orgmode@gnu.org archives
 help / color / mirror / code / Atom feed
From: Andreas Leha <andreas.leha@med.uni-goettingen.de>
To: emacs-orgmode@gnu.org
Subject: question about R graphics and latex export
Date: Thu, 17 Feb 2011 14:52:45 +0100	[thread overview]
Message-ID: <4D5D282D.9010309@med.uni-goettingen.de> (raw)


[-- Attachment #1.1: Type: text/plain, Size: 1785 bytes --]

Hi all,

I usually produce tikz graphics in R which produce great results in
latex export (and I am able to handle them....).
Now I have some plots too big to handle with tikz, so I go for pdf.

I have a question (example below):
There is one piece of code to produce several plots according to some
(only one in the example) parameters.  Now with pdf I have to produce a
different pdf file for each parameter (combination).
My question is:  Can I use Org variable and #+call: constructs to do that?

Thanks in advance!
- Andreas

PS: This is my sample:
=============================
#+TITLE:    Test Plots

* Test

** The plotting code
   This code takes the parameter =sd=
   #+srcname: plot_code
   #+begin_src R :session :exports code :eval never :var sd
     plot(x=rnorm(100, sd=sd),
          y=rnorm(100, sd=sd))
   #+end_src

** Set the parameter in =R= (working)
   When setting the parameter in =R= I need an "indirect" code block:
   #+srcname: plot_sd_1
   #+begin_src R :session :noweb tangle :file plotone.pdf :exports
results :results graphics silent :width 8 :height 4
     sd <- 1
   
     <<plot_code>>
   #+end_src

   Now I can include this nicely in latex: See figure \ref{fig:test}
    #+begin_src latex :noweb yes
      \begin{figure}[htb!]
        \centering
        \includegraphics[width=5in]{<<plot_sd_1()>>}
        \caption[Test]{Test 1}
        \label{fig:test}
      \end{figure}
    #+end_src


** Set the parameter in Org (How to do)
   The following does not work.  Is this somehow possible?  Would be
   much nicer than setting the parameters in R.
#  #+call: plot_code(sd=1) :session :file plotthree.pdf :exports results
:results graphics :width 8 :height 4
=============================



[-- Attachment #1.2: S/MIME Cryptographic Signature --]
[-- Type: application/pkcs7-signature, Size: 6432 bytes --]

[-- Attachment #2: Type: text/plain, Size: 201 bytes --]

_______________________________________________
Emacs-orgmode mailing list
Please use `Reply All' to send replies to the list.
Emacs-orgmode@gnu.org
http://lists.gnu.org/mailman/listinfo/emacs-orgmode

                 reply	other threads:[~2011-02-17 13:52 UTC|newest]

Thread overview: [no followups] expand[flat|nested]  mbox.gz  Atom feed

Reply instructions:

You may reply publicly to this message via plain-text email
using any one of the following methods:

* Save the following mbox file, import it into your mail client,
  and reply-to-all from there: mbox

  Avoid top-posting and favor interleaved quoting:
  https://en.wikipedia.org/wiki/Posting_style#Interleaved_style

  List information: https://www.orgmode.org/

* Reply using the --to, --cc, and --in-reply-to
  switches of git-send-email(1):

  git send-email \
    --in-reply-to=4D5D282D.9010309@med.uni-goettingen.de \
    --to=andreas.leha@med.uni-goettingen.de \
    --cc=emacs-orgmode@gnu.org \
    /path/to/YOUR_REPLY

  https://kernel.org/pub/software/scm/git/docs/git-send-email.html

* If your mail client supports setting the In-Reply-To header
  via mailto: links, try the mailto: link
Be sure your reply has a Subject: header at the top and a blank line before the message body.
Code repositories for project(s) associated with this public inbox

	https://git.savannah.gnu.org/cgit/emacs/org-mode.git

This is a public inbox, see mirroring instructions
for how to clone and mirror all data and code used for this inbox;
as well as URLs for read-only IMAP folder(s) and NNTP newsgroup(s).