From mboxrd@z Thu Jan 1 00:00:00 1970 From: Rainer M Krug Subject: [BABEL] "unset" :var definitions for subtree Date: Mon, 07 Feb 2011 16:12:44 +0100 Message-ID: <4D500BEC.1080300@gmail.com> Mime-Version: 1.0 Content-Type: text/plain; charset=ISO-8859-1 Content-Transfer-Encoding: 7bit Return-path: Received: from [140.186.70.92] (port=36214 helo=eggs.gnu.org) by lists.gnu.org with esmtp (Exim 4.43) id 1PmSlq-0003sl-B0 for emacs-orgmode@gnu.org; Mon, 07 Feb 2011 10:12:58 -0500 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1PmSlp-0002GQ-22 for emacs-orgmode@gnu.org; Mon, 07 Feb 2011 10:12:54 -0500 Received: from mail-ww0-f49.google.com ([74.125.82.49]:63445) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1PmSlo-0002GA-U7 for emacs-orgmode@gnu.org; Mon, 07 Feb 2011 10:12:53 -0500 Received: by wwb17 with SMTP id 17so4788066wwb.30 for ; Mon, 07 Feb 2011 07:12:51 -0800 (PST) List-Id: "General discussions about Org-mode." List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Sender: emacs-orgmode-bounces+geo-emacs-orgmode=m.gmane.org@gnu.org Errors-To: emacs-orgmode-bounces+geo-emacs-orgmode=m.gmane.org@gnu.org To: emacs-orgmode -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA1 Hi For one project, I am usinr org to write submit scripte to a cluster runing torqu. The important bit in this is, that between the shebang and the code, no other executable line must occur. As I am using variables in org (:var) they will occur just after the shebang, which causes a problem for torque. So, my question is, is there a way to "unset" variables defined by using :var for a subtree? #+BABEL: :session *R* :results output :exports both :tangle Analysis_sensitivity.R :var RESULTSDIR="/media/Results/" :var ANALYSISDIR="~/Documents/Projects/analysis/" * submit script (SA.sub) :PROPERTIES: :tangle: ./SA.sub :exports: code :END: #+begin_src sh #PBS -j y #PBS -M Rainer@krugs.de #PBS -V #PBS -l nodes=1:mem=4gb ## cd $PBS_O_WORKDIR #+end_src I would need the tangled code to be : #!/bin/bash #PBS -j y #PBS -M Rainer@krugs.de #PBS -V #PBS -l nodes=1:mem=4gb ## cd $PBS_O_WORKDIR But it is #!/bin/bash RESULTSDIR=/media/Results/ ANALYSISDIR=~/Documents/Projects/analysis/ #PBS -j y #PBS -M Rainer@krugs.de #PBS -V #PBS -l nodes=1:mem=4gb ## cd $PBS_O_WORKDIR But RESULTSDIR and ANALYSISDIR is used in the remainder of the document (several other subtrees) Any help appreciated, Rainer - -- Rainer M. Krug, PhD (Conservation Ecology, SUN), MSc (Conservation Biology, UCT), Dipl. Phys. (Germany) Centre of Excellence for Invasion Biology Natural Sciences Building Office Suite 2039 Stellenbosch University Main Campus, Merriman Avenue Stellenbosch South Africa Tel: +33 - (0)9 53 10 27 44 Cell: +27 - (0)8 39 47 90 42 Fax (SA): +27 - (0)8 65 16 27 82 Fax (D) : +49 - (0)3 21 21 25 22 44 Fax (FR): +33 - (0)9 58 10 27 44 email: Rainer@krugs.de Skype: RMkrug -----BEGIN PGP SIGNATURE----- Version: GnuPG v1.4.10 (GNU/Linux) Comment: Using GnuPG with Mozilla - http://enigmail.mozdev.org/ iEYEARECAAYFAk1QC+wACgkQoYgNqgF2egramwCeKbj6CbfK0ZBF03ZkfJBTbhc5 9pQAniXZum0sK3GX4ZxEzIAGRPu3fMxM =zO07 -----END PGP SIGNATURE-----