From: Nick Dokos <nicholas.dokos@hp.com>
To: "Thomas S. Dye" <tsd@tsdye.com>
Cc: nicholas.dokos@hp.com, emacs-orgmode@gnu.org
Subject: Re: Code block evaluation export bug ?
Date: Sat, 22 Oct 2011 19:51:14 -0400 [thread overview]
Message-ID: <32187.1319327474@alphaville.dokosmarshall.org> (raw)
In-Reply-To: Message from tsd@tsdye.com (Thomas S. Dye) of "Thu, 20 Oct 2011 15:57:20 -1000." <m17h3zm7i7.fsf@tsdye.com>
Thomas S. Dye <tsd@tsdye.com> wrote:
> Nick Dokos <nicholas.dokos@hp.com> writes:
>
> > While testing my response to Viktor's question, I ran into a problem.
> > I used a test file that is slightly modified from a previous post of Tom Dye's:
> >
> > * R tables
> >
> > #+TBLNAME: tbl-1
> > | column1 | column2 |
> > |---------+---------|
> > | 45 | 34 |
> > | 77 | 56 |
> >
> > #+tblname: tbl-2
> > | col1 | col2 |
> > |------+------|
> > | a | b |
> > | c | d |
> >
> > #+tblname: tbl-3
> > | c1 | c2 |
> > |----+----|
> > | A | B |
> > | C | D |
> >
> > #+BEGIN_SRC R :var x=tbl-1 :var y=tbl-2 :var z=tbl-3 :colnames yes :exports both :results value
> > z
> > #+END_SRC
> >
> >
> >
> > Evaluating the code block correctly produces the result
> >
> > ,----
> > |
> > | #+results:
> > | | c1 | c2 |
> > | |----+----|
> > | | A | B |
> > | | C | D |
> > `----
> >
> > but exporting (to ascii, PDF, HTML or ODT) chops off the first row of
> > the result. For example, here
> > is the ascii:
> >
> > ,----
> > |
> > | c1 c2
> > | ----+----
> > | C D
> > `----
> > ...
>
> Aloha Nick,
>
> I see the same behavior.
>
Here's a progress report on this: the call chain is
,----
|
| org-babel-process-params(((:comments . "") (:shebang . "") (:cache . "no") (:padline . "") (:noweb . "no") (:tangle . "no") (:exports . "both") (:results . "replace value") (:var x (45 34) (77 56)) (:var y ("a" "b") ("c" "d")) (:var z ("A" "B") ("C" "D")) (:session . "none") (:rowname-names) (:result-type . value) (:result-params "replace" "value") (:padnewline . "yes") (:hlines . "no") (:colnames . "yes") (:colname-names (x "column1" "column2") (y "col1" "col2") (z "c1" "c2"))))
| ...
| (org-babel-exp-in-export-file lang (org-babel-process-params (org-babel-merge-params (nth 2 info) (\` ((:results \, (if silent "silent" "replace")))))))
| ...
| org-babel-exp-results(("R" "z" ((:cache . "no") (:colname-names (x "column1" "column2") (y "col1" "col2") (z "c1" "c2")) (:colnames . "yes") (:comments . "") (:exports . "both") (:hlines . "no") (:noweb . "no") (:padline . "") (:padnewline . "yes") (:result-params "replace" "value") (:result-type . value) (:results . "replace value") (:rowname-names) (:session . "none") (:shebang . "") (:tangle . "no") (:var x (45 34) (77 56)) (:var y ("a" "b") ("c" "d")) (:var z ("A" "B") ("C" "D"))) "" nil 0) block nil "6443d36b0252c9e3192f813429018760bee3c11d")
| ...
| org-babel-exp-do-export(("R" "z" ((:cache . "no") (:colname-names (x "column1" "column2") (y "col1" "col2") (z "c1" "c2")) (:colnames . "yes") (:comments . "") (:exports . "both") (:hlines . "no") (:noweb . "no") (:padline . "") (:padnewline . "yes") (:result-params "replace" "value") (:result-type . value) (:results . "replace value") (:rowname-names) (:session . "none") (:shebang . "") (:tangle . "no") (:var x (45 34) (77 56)) (:var y ("a" "b") ("c" "d")) (:var z ("A" "B") ("C" "D"))) "" nil 0) block "6443d36b0252c9e3192f813429018760bee3c11d")
|
| org-babel-exp-src-block(...)
|
| org-export-blocks-preprocess()
| ...
| org-export-preprocess-string(...)
| ...
| org-export-as-ascii(nil nil nil "*Org ASCII Export*")
| org-export-as-ascii-to-buffer(nil)
| ...
| org-export(nil)
`----
So far, so good: x, y and z are still 2x2 tables. But evaluating the last form, we get
((:var x (77 56)) (:var y ("c" "d")) (:var z ("C" "D")) (:colname-names (x "column1" "column2") (y "col1" "col2") (z "c1" "c2")) (:rowname-names) (:result-params "replace" "value" "replace" "value") (:result-type . value) (:comments . "") (:shebang . "") (:cache . "no") (:padline . "") (:noweb . "no") ...)
The first row of each table has disappeared. Looks like a problem with org-babel-process-params.
Eric, can you take a look?
Thanks,
Nick
next prev parent reply other threads:[~2011-10-22 23:51 UTC|newest]
Thread overview: 68+ messages / expand[flat|nested] mbox.gz Atom feed top
2011-09-22 7:36 [Bug] local variables definition at beginning of file is ignored Viktor Rosenfeld
2011-09-22 9:48 ` Viktor Rosenfeld
[not found] ` <listuser36@googlemail.com>
2011-09-22 14:43 ` Nick Dokos
2011-09-22 14:58 ` Nick Dokos
2011-10-19 16:47 ` [babel] Verbatim output from SQL command Nick Dokos
2011-10-19 17:31 ` Viktor Rosenfeld
2011-10-19 17:34 ` Sebastien Vauban
2011-10-19 21:12 ` Export an org file from the command line in the background Nick Dokos
2011-10-19 22:28 ` Viktor Rosenfeld
2011-10-19 21:22 ` Code block evaluation export bug ? (was: Re: Export an org file from the command line in the background) Nick Dokos
2011-10-21 1:57 ` Code block evaluation export bug ? Thomas S. Dye
2011-10-21 2:42 ` Nick Dokos
2011-10-21 4:37 ` Nick Dokos
2011-10-22 23:51 ` Nick Dokos [this message]
2011-11-09 21:13 ` Eric Schulte
2011-11-09 21:55 ` Nick Dokos
2011-10-19 22:37 ` Export an org file from the command line in the background Nick Dokos
2011-11-16 15:52 ` Question regarding remote references in tables Nick Dokos
2011-11-16 16:40 ` Nick Dokos
2011-11-16 17:43 ` Viktor Rosenfeld
2011-12-13 22:16 ` Refresh of http://orgmode.org Nick Dokos
2012-07-07 20:02 ` Functions in SBE blocks Nick Dokos
2012-07-08 0:55 ` Viktor Rosenfeld
-- strict thread matches above, loose matches on Subject: below --
2011-10-18 13:20 [babel] Verbatim output from SQL command Sebastien Vauban
2011-10-18 16:15 ` Eric Schulte
2011-10-19 9:19 ` Sebastien Vauban
2011-10-19 18:08 ` Eric Schulte
2011-10-20 8:03 ` Sebastien Vauban
2011-10-19 16:29 ` Viktor Rosenfeld
2011-10-19 16:21 Export an org file from the command line in the background Viktor Rosenfeld
2011-10-19 16:27 ` Jambunathan K
2011-10-19 20:14 ` Viktor Rosenfeld
2011-11-16 15:27 Question regarding remote references in tables Viktor Rosenfeld
2011-12-12 23:39 Refresh of http://orgmode.org Bastien
2011-12-13 17:25 ` Achim Gratz
2011-12-13 19:27 ` Bastien
2011-12-13 19:32 ` Nick Dokos
2011-12-13 20:27 ` Achim Gratz
2011-12-20 23:23 ` Bastien
2011-12-13 17:39 ` Samuel Wales
2011-12-13 18:39 ` Eric S Fraga
2011-12-13 18:59 ` Samuel Wales
2011-12-13 19:35 ` Bastien
2011-12-13 19:51 ` Samuel Wales
2011-12-14 8:49 ` Eric S Fraga
2011-12-13 19:33 ` Bastien
2011-12-13 21:50 ` Viktor Rosenfeld
2011-12-13 22:22 ` Bastien
2011-12-14 8:53 ` Eric S Fraga
2011-12-14 12:54 ` Viktor Rosenfeld
2011-12-14 17:40 ` Bastien
2011-12-14 18:15 ` Bastien
2011-12-14 22:10 ` Viktor Rosenfeld
2011-12-14 22:17 ` Eric Schulte
2011-12-14 1:19 ` Eric Schulte
2011-12-14 10:07 ` Bastien
2011-12-14 18:45 ` Eric Schulte
2011-12-15 4:11 ` Eric Schulte
2011-12-15 14:03 ` Bastien
2011-12-15 15:10 ` Eric Schulte
2011-12-15 15:18 ` Bastien
2011-12-15 15:26 ` Eric Schulte
2011-12-15 15:44 ` Bastien
2011-12-15 14:10 ` Bastien
2011-12-14 13:17 ` Stefan Vollmar
2011-12-14 2:30 ` Scott Randby
2011-12-15 13:10 ` Martyn Jago
2012-07-07 18:58 Functions in SBE blocks Viktor Rosenfeld
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