emacs-orgmode@gnu.org archives
 help / color / mirror / code / Atom feed
From: Karl Voit <devnull@Karl-Voit.at>
To: emacs-orgmode@gnu.org
Subject: Re: Redirecting stderr to stdout with babel/shell
Date: Sun, 11 Jan 2015 11:54:30 +0100	[thread overview]
Message-ID: <2015-01-11T11-53-02@devnull.Karl-Voit.at> (raw)
In-Reply-To: m2iogmk5bv.fsf@gmail.com

* John Kitchin <johnrkitchin@gmail.com> wrote:
> Check out this solution:
>
> http://kitchingroup.cheme.cmu.edu/blog/2015/01/04/Redirecting-stderr-in-org-mode-shell-blocks/

Hm. This does not work on my machine: Debian Wheezy GNU/Linux

Testing the current satus (again):

#+BEGIN_SRC sh :results output
echo "testing stdout" >&1
echo "testing stderr" >&2
date -g
#+END_SRC

#+RESULTS:

... no stderr on stdout and date error message in second buffer


Creating a wrapper-script similar as described in web-page above:

#+BEGIN_SRC sh
echo '#!/usr/bin/zsh
{
/usr/bin/zsh $1
} 2>&1' > ~/src/misc/zsh_stderr_redirected_to_stdout.sh
chmod +x ~/src/misc/zsh_stderr_redirected_to_stdout.sh
cd ~/bin
ln -s ../src/misc/zsh_stderr_redirected_to_stdout.sh .
#+END_SRC

#+RESULTS:

Setting the sh-command to this wrapper-script:

#+BEGIN_SRC elisp
(setq org-babel-sh-command "~/bin/zsh_stderr_redirected_to_stdout.sh")
#+END_SRC

#+RESULTS:
: ~/bin/zsh_stderr_redirected_to_stdout.sh

Re-testing status:

#+BEGIN_SRC sh :results output
echo "testing stdout" >&1
echo "testing stderr" >&2
date -g
#+END_SRC

#+RESULTS:

... no change except the second buffer for the date error message is
empty. So it's actually worse than before.


Trying with bash (as web-page did):

#+BEGIN_SRC sh
echo '#!/bin/bash
{
/bin/bash $1
} 2>&1' > ~/src/misc/bash_stderr_redirected_to_stdout.sh
chmod +x ~/src/misc/bash_stderr_redirected_to_stdout.sh
cd ~/bin
ln -s ../src/misc/bash_stderr_redirected_to_stdout.sh .
#+END_SRC

#+RESULTS:

Setting the sh-command to this wrapper-script:

#+BEGIN_SRC elisp
(setq org-babel-sh-command "~/bin/bash_stderr_redirected_to_stdout.sh")
#+END_SRC

#+RESULTS:
: ~/bin/bash_stderr_redirected_to_stdout.sh

Same result as with zsh :-(


Re-setting to standard settings to revoke tests from above:

#+BEGIN_SRC elisp
(setq org-babel-sh-command "sh")
#+END_SRC

#+RESULTS:
: sh

Re-testing status:

#+BEGIN_SRC sh :results output
echo "testing stdout" >&1
echo "testing stderr" >&2
date -g
#+END_SRC

#+RESULTS:


-- 
mail|git|SVN|photos|postings|SMS|phonecalls|RSS|CSV|XML to Org-mode:
       > get Memacs from https://github.com/novoid/Memacs <

https://github.com/novoid/extract_pdf_annotations_to_orgmode + more on github

  reply	other threads:[~2015-01-11 10:55 UTC|newest]

Thread overview: 11+ messages / expand[flat|nested]  mbox.gz  Atom feed  top
2015-01-01 16:27 Redirecting stderr to stdout with babel/shell Karl Voit
2015-01-01 17:10 ` Michael Brand
2015-01-02 21:43 ` Samuel Wales
2015-01-04 14:07   ` John Kitchin
2015-01-11 10:54     ` Karl Voit [this message]
2015-01-11 16:44       ` John Kitchin
2015-01-11 18:31         ` Karl Voit
2015-01-11 18:58           ` Achim Gratz
2015-01-21 16:52             ` Karl Voit
2015-01-11 11:43 ` Achim Gratz
2015-01-11 15:02   ` Karl Voit

Reply instructions:

You may reply publicly to this message via plain-text email
using any one of the following methods:

* Save the following mbox file, import it into your mail client,
  and reply-to-all from there: mbox

  Avoid top-posting and favor interleaved quoting:
  https://en.wikipedia.org/wiki/Posting_style#Interleaved_style

  List information: https://www.orgmode.org/

* Reply using the --to, --cc, and --in-reply-to
  switches of git-send-email(1):

  git send-email \
    --in-reply-to=2015-01-11T11-53-02@devnull.Karl-Voit.at \
    --to=devnull@karl-voit.at \
    --cc=emacs-orgmode@gnu.org \
    --cc=news1142@Karl-Voit.at \
    /path/to/YOUR_REPLY

  https://kernel.org/pub/software/scm/git/docs/git-send-email.html

* If your mail client supports setting the In-Reply-To header
  via mailto: links, try the mailto: link
Be sure your reply has a Subject: header at the top and a blank line before the message body.
Code repositories for project(s) associated with this public inbox

	https://git.savannah.gnu.org/cgit/emacs/org-mode.git

This is a public inbox, see mirroring instructions
for how to clone and mirror all data and code used for this inbox;
as well as URLs for read-only IMAP folder(s) and NNTP newsgroup(s).