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envelope-from=ccberry@health.ucsd.edu; helo=mx0b-00395d01.pphosted.com X-detected-operating-system: by eggs.gnu.org: First seen = 2020/09/08 12:45:57 X-ACL-Warn: Detected OS = Linux 3.x [generic] X-Spam_score_int: -26 X-Spam_score: -2.7 X-Spam_bar: -- X-Spam_report: (-2.7 / 5.0 requ) BAYES_00=-1.9, DKIM_SIGNED=0.1, DKIM_VALID=-0.1, DKIM_VALID_EF=-0.1, RCVD_IN_DNSWL_LOW=-0.7, SPF_HELO_NONE=0.001, SPF_PASS=-0.001 autolearn=ham autolearn_force=no X-Spam_action: no action X-BeenThere: emacs-orgmode@gnu.org X-Mailman-Version: 2.1.23 Precedence: list List-Id: "General discussions about Org-mode." List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Cc: "emacs-orgmode@gnu.org" , Dylan Schwilk Errors-To: emacs-orgmode-bounces+larch=yhetil.org@gnu.org Sender: "Emacs-orgmode" Reply-to: "Berry, Charles" From: "Berry, Charles" via "General discussions about Org-mode." X-Scanner: scn0 Authentication-Results: aspmx1.migadu.com; dkim=fail (rsa verify failed) header.d=ucsd.edu header.s=campus header.b=DFmT8auF; dkim=fail (rsa verify failed) header.d=ucsdhs.onmicrosoft.com header.s=selector2-ucsdhs-onmicrosoft-com header.b=tpLXuVqu; dmarc=none; spf=pass (aspmx1.migadu.com: domain of emacs-orgmode-bounces@gnu.org designates 209.51.188.17 as permitted sender) smtp.mailfrom=emacs-orgmode-bounces@gnu.org X-Spam-Score: 1.99 X-TUID: 5XAjUnb7Xtm6 Jack, Maybe I am confused here: > On Sep 8, 2020, at 7:51 AM, Jack Kamm wrote: >=20 > Yes, if we did that then tmp-file would have a prefix like > "/scp:user@hostname:", and elisp would then know to read the result file > from the remote host. >=20 > Before pasting tmp-file into R code, we should also call >=20 > (org-babel-process-file-name tmp-file 'noquote) >=20 > to remove the tramp prefix when referring to the file from R. this is already present in `org-babel-R-evaluate-session' in the call to `o= rg-babel-comint-eval-invisibly-and-wait-for-file'' just a couple of lines f= urther down in the `(cl-case result-type (value ...))' branch. The other use of `tmp-file' in that block is the one that requires the pref= ix, right? So nothing more to fix. ?? Chuck=