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From: Andreas Leha <andreas.leha@med.uni-goettingen.de>
To: emacs-orgmode@gnu.org
Subject: Re: Emacs/ESS/org freezes/hangs on big data/ RAM(~256GB) processes when run in org/babel
Date: Fri, 19 Jun 2015 23:25:35 +0100	[thread overview]
Message-ID: <oluioaj8heo.fsf@med.uni-goettingen.de> (raw)
In-Reply-To: alpine.OSX.2.11.1506191505440.914@charles-berrys-macbook.local

"Charles C. Berry" <ccberry@ucsd.edu> writes:
> On Thu, 18 Jun 2015, Andreas Leha wrote:
>
>> Hi Chuck,
>>
>> [snip: all context about workflows for R projects]
>>
>>> For example, the bioConductor package geneRxCluster [1] comes from an
>>> Org mode document that contains the C and R code as src blocks and a
>>> subtree with the vignette (Using geneRxCluster) that analyzes data,
>>> produces graphics, etc. tangle-ing the src blocks and exporting the
>>> vignette creates the package.
>>>
>>
>> I'd love to see that org document, but I do not seem to be able to find
>> it.  Is it available anywhere?
>
> Andreas,
>
> It is now, or at least the relevant subset of it is at:
>
> https://github.com/chasberry/geneRx/blob/master/Rpackage.org
>
> It is best viewed in Org mode as there are internal links that github
> does not honor (so you get `404 This is not...' messages if you click
> on them).
>
> And it is best to use those internal links as the file was not
> designed to be read from top to bottom - it has lots of snippets I
> used to develop and check code along the way that are not in the
> actual package and I have left them in place.
>

That is awesome!  Really appreciated!  I will take a good look.

Thanks,
Andreas

  reply	other threads:[~2015-06-19 22:25 UTC|newest]

Thread overview: 13+ messages / expand[flat|nested]  mbox.gz  Atom feed  top
2015-06-17 19:09 Emacs/ESS/org freezes/hangs on big data/ RAM(~256GB) processes when run in org/babel Xebar Saram
2015-06-17 19:19 ` William Denton
2015-06-18  3:17   ` Charles C. Berry
2015-06-18 11:39     ` Xebar Saram
2015-06-18 18:45       ` Charles C. Berry
2015-06-18 12:34     ` Rainer M Krug
2015-06-18 20:20       ` Charles C. Berry
2015-06-18 21:20         ` Andreas Leha
2015-06-19 22:13           ` Charles C. Berry
2015-06-19 22:25             ` Andreas Leha [this message]
2015-06-19 22:31       ` Andreas Leha
2015-06-20 15:05         ` Rainer M Krug
2015-06-20 21:20           ` Andreas Leha

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