From: Rainer M Krug <Rainer@krugs.de>
To: Ed Kademan <ed@kademan.org>
Cc: emacs-orgmode@gnu.org
Subject: Re: Bug: problem w/ R code blocks [8.3beta (release_8.3beta-362-ga92789 @ /usr/local/share/emacs/site-lisp/org/)]
Date: Tue, 16 Sep 2014 15:03:54 +0200 [thread overview]
Message-ID: <m2r3zbn2dh.fsf@krugs.de> (raw)
In-Reply-To: <87bnqgzljd.fsf@kademan.org> (Ed Kademan's message of "Mon, 15 Sep 2014 16:16:54 -0400")
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Thanks - you came before me. I get the same error but managed to work around.
This is likely caused by the upgrade of ess, as I realized it after
upgrading to ess 14.09.
You can work around by
1) evaluating the R code which gives the error message
2) quitting the R session
3) re-starting the R session manually in the same window (where the old
R session was)
I also send this to the ess mailing list.
Cheers,
Rainer
Ed Kademan <ed@kademan.org> writes:
> I can't evaluate R code blocks in org files. For example the file with
> contents:
>
> #+property: header-args:R :session R-foo
>
> #+BEGIN_SRC R
> print(pi)
> #+END_SRC
>
> spawns an R session that reports:
>
> Error: could not find function ".ess.eval"
>
> and does not give me a result.
> I am running ess-version: 14.09 and am invoking emacs as follows:
>
> #!/bin/sh
>
> o=/usr/local/share/emacs/site-lisp/org
> emacs -Q --eval="(progn
> (add-to-list 'load-path \"$o\")
> (require 'org)
> (org-babel-do-load-languages
> 'org-babel-load-languages
> '((R . t)))
> (package-initialize)
> (setq ess-ask-for-ess-directory 'nil
> ess-directory \"~/R/\"))"
>
> EdK
>
> Emacs : GNU Emacs 24.4.50.1 (i686-pc-linux-gnu, GTK+ Version 2.24.23)
> of 2014-08-23 on dl
> Package: Org-mode version 8.3beta (release_8.3beta-362-ga92789 @ /usr/local/share/emacs/site-lisp/org/)
>
> current state:
> ==============
> (setq
> org-ctrl-c-ctrl-c-hook '(org-babel-hash-at-point
> org-babel-execute-safely-maybe)
> org-tab-first-hook '(org-hide-block-toggle-maybe
> org-babel-hide-result-toggle-maybe
> org-babel-header-arg-expand)
> org-cycle-hook '(org-cycle-hide-archived-subtrees org-cycle-hide-drawers
> org-cycle-hide-inline-tasks org-cycle-show-empty-lines
> org-optimize-window-after-visibility-change)
> org-agenda-before-write-hook '(org-agenda-add-entry-text)
> org-speed-command-hook '(org-speed-command-default-hook
> org-babel-speed-command-hook)
> org-babel-pre-tangle-hook '(save-buffer)
> org-occur-hook '(org-first-headline-recenter)
> org-metaup-hook '(org-babel-load-in-session-maybe)
> org-confirm-elisp-link-function 'yes-or-no-p
> org-clock-out-hook '(org-clock-remove-empty-clock-drawer)
> org-mode-hook '(#[nil "\300\301\302\303\304$\207"
> [org-add-hook change-major-mode-hook org-show-block-all
> append local]
> 5]
> #[nil "\300\301\302\303\304$\207"
> [org-add-hook change-major-mode-hook
> org-babel-show-result-all append local]
> 5]
> org-babel-result-hide-spec org-babel-hide-all-hashes)
> org-metadown-hook '(org-babel-pop-to-session-maybe)
> org-src-mode-hook '(org-src-babel-configure-edit-buffer
> org-src-mode-configure-edit-buffer)
> org-after-todo-state-change-hook '(org-clock-out-if-current)
> org-babel-load-languages '((R . t))
> org-confirm-shell-link-function 'yes-or-no-p
> )
--
Rainer M. Krug
email: Rainer<at>krugs<dot>de
PGP: 0x0F52F982
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next prev parent reply other threads:[~2014-09-16 13:09 UTC|newest]
Thread overview: 23+ messages / expand[flat|nested] mbox.gz Atom feed top
2014-09-15 20:16 Bug: problem w/ R code blocks [8.3beta (release_8.3beta-362-ga92789 @ /usr/local/share/emacs/site-lisp/org/)] Ed Kademan
2014-09-16 13:03 ` Rainer M Krug [this message]
2014-09-16 20:17 ` Bug: problem w/ R code blocks [8.3beta (release_8.3beta-362-ga92789 <at> /usr/local/share/emacs/site-lisp/org/)] Charles Berry
2014-09-17 3:25 ` [PATCH] WAS " Charles Berry
2014-09-17 7:20 ` Rainer M Krug
2014-09-17 7:26 ` Rainer M Krug
2014-09-17 23:14 ` Cook, Malcolm
[not found] ` <D4772401B9D976478C0895769BE3E7920F1ED33C@MBSRV02.sgc.loc>
2014-09-18 21:13 ` Cook, Malcolm
2014-09-18 21:27 ` Aaron Ecay
2014-09-19 7:50 ` Rainer M Krug
2014-09-18 22:34 ` Charles C. Berry
2014-09-18 22:45 ` Charles C. Berry
2014-10-07 19:34 ` Henrik Singmann
2014-10-07 21:17 ` Ista Zahn
2014-10-08 1:59 ` Charles Berry
2014-10-08 1:21 ` Charles Berry
2014-10-08 9:57 ` Henrik Singmann
2014-10-10 4:38 ` Aaron Ecay
2014-10-10 9:18 ` Henrik Singmann
2014-10-10 16:36 ` Aaron Ecay
2014-12-09 21:07 ` Cook, Malcolm
2014-09-18 1:17 ` Aaron Ecay
2014-09-18 15:17 ` Charles C. Berry
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