From mboxrd@z Thu Jan 1 00:00:00 1970 From: Rainer M Krug Subject: Re: [BUG] [babel] [R] :colnames yes conflicts with :results file Date: Tue, 06 Jan 2015 14:49:48 +0100 Message-ID: References: Mime-Version: 1.0 Content-Type: multipart/signed; boundary="=-=-="; micalg=pgp-sha1; protocol="application/pgp-signature" Return-path: Received: from eggs.gnu.org ([2001:4830:134:3::10]:51306) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1Y8UWH-0007nb-4j for emacs-orgmode@gnu.org; Tue, 06 Jan 2015 08:50:02 -0500 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1Y8UWD-0001Bi-SR for emacs-orgmode@gnu.org; Tue, 06 Jan 2015 08:50:01 -0500 Received: from mail-wg0-f53.google.com ([74.125.82.53]:47125) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1Y8UWD-0001BW-MX for emacs-orgmode@gnu.org; Tue, 06 Jan 2015 08:49:57 -0500 Received: by mail-wg0-f53.google.com with SMTP id x13so11569726wgg.40 for ; Tue, 06 Jan 2015 05:49:57 -0800 (PST) In-Reply-To: (Andreas Leha's message of "Tue, 06 Jan 2015 12:40:42 +0000") List-Id: "General discussions about Org-mode." List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: emacs-orgmode-bounces+geo-emacs-orgmode=m.gmane.org@gnu.org Sender: emacs-orgmode-bounces+geo-emacs-orgmode=m.gmane.org@gnu.org To: Andreas Leha Cc: emacs-orgmode@gnu.org --=-=-= Content-Type: text/plain Content-Transfer-Encoding: quoted-printable Andreas Leha writes: > Hi all, Hi > > There seems to be a bug in babel (at least for R) when it comes to > source blocks producing file links but taking tables with headers. In > that case, ':colnames yes' disables the ':results file' directive. I don't think this is a bug as it is not clear what should happen. In the org manual it states concerning the :results file ,---- | * `file' The results will be interpreted as the path to a file, and | will be inserted into the Org mode buffer as a file link. E.g., | `:results value file'.=20 `---- But the :colnames only works on tables (i.e. :results table) - but the result is represented as a link to a file. So what should happen? If you would like to have a table with links to files, the easiest is to put the file names into [[]] in R and then return them in a table - or use :results output and "draw" the table. But as it stands, these two header arguments do not go together. It would be nice to have a warning (or even error) in org, or at least a table of header argument precedence. By the way - never used the :results file - but now I will! Thanks. Hope this helps, Rainer > > Here is the Cm: > * test > > #+BEGIN_SRC R :results file replace > "some_file.csv" > #+END_SRC > > #+RESULTS: > [[file:some_file.csv]] > > #+BEGIN_SRC R :colnames yes :results file replace > "some_file.csv" > #+END_SRC > > #+RESULTS: > | x | > |---------------| > | some_file.csv | > > > > * My Setup > #+begin_src emacs-lisp > (concat > (replace-regexp-in-string " on .*" "" (emacs-version)) > "\n" > (replace-regexp-in-string " @.*" ")" (org-version nil t)) > "\n" > (replace-regexp-in-string "].*" "]" (ess-version))) > #+end_src > > #+RESULTS: > : GNU Emacs 24.4.50.1 (x86_64-apple-darwin13.3.0, NS appkit-1265.21 Versi= on 10.9.4 (Build 13E28)) > : of 2014-09-02 > : Org-mode version 8.3beta (release_8.3beta-717-ga8096c) > : ess-version: 14.05 [git: 4283f1304a54502c42707b6a4ba347703f0992dd] > > Regards, > Andreas > > > =2D-=20 Rainer M. Krug email: Rainerkrugsde PGP: 0x0F52F982 --=-=-= Content-Type: application/pgp-signature; name="signature.asc" -----BEGIN PGP SIGNATURE----- Version: GnuPG/MacGPG2 v2.0.22 (Darwin) iQEcBAEBAgAGBQJUq+gAAAoJENvXNx4PUvmCdIsIAJfkzc2MVaDfZaIam/qH6apD AvjMAzay9AvdwqU/pBKlWhdGTLnbNRE+CkpADX0JPygdrm9keUJdOKccJ6FjChFP jRcMlxv3aqKhHSu+/A5y5QFhiyJ/nU+1OK4ameD5WcxL7Wi97wbHHT/aYEpsdU9w 4hnZJsKcaWNmjEjwVchfSv6qCl+hL3wiAQwD+MdLbRjoo0ZLpNO7A9KlLLB1Iain k4YVVB11oB1na7X9BPioSb9btpMTiFAzf6cHszakVTq9gu/xEYeklVKkcYiD1woy edzC/WmhN9AJbP5QFLzZSUpwNOEziZj48zOTA+36O56Nt2fRCGS9Q9UjJZOMi18= =V/ol -----END PGP SIGNATURE----- --=-=-=--