Nicolas Goaziou <mail@nicolasgoaziou.fr> writes:

> Rainer M Krug <Rainer@krugs.de> writes:
>
>> Well - now it does. The following produces the error:
>>
>> #+PROPERTY: header-args  :tangle-mode (identity #o444)
>>
>> * Some code
>>
>> #+begin_src R :results nons
>>
>> #+end_src
>>
>> The problem is the (identity #o444) which is causing the problem.
>
> Fixed. Thank you.

Thanks - working.

Now there re a few more lints giving wrong warnings:

1) not identifying header argument with +
,----
| #+PROPERTY: header-args+ :tangle no
`----

results in

,----
| 87 high  Unknown header argument ""
`----

2) not knowing header argument "file-ext" from R
,----
| #+begin_src R  :exports results :file-ext pdf :results graphics :width 8 :height 8
| plotSensMainEffAll(files)
| #+end_src
`----

results in

,----
|   1691 high  Unknown header argument "file-ext"
`----

3) I am not to sure about this one, but in LaTeX labels of figures are
with the colon. Initially, I had #+LABEL: instead of #+NAME: but changed
it as one should use #+NAME instead of #+LABEL, but now I get the following:

,----
| #+CAPTION: The caption
| #+NAME: fig:sensDefault
| #+RESULTS: fig_sensDefault
| [[file:./output/fig_sensDefault.pdf]]
`----

results in

,----
|   1686 high  Name "fig:sensDefault" contains a colon; Babel cannot use it as input
`----

I agree with the fact that Babel can not use it as input, but I do not
want to use it as input, only as a label in LaTeX for the figure?

According to the manual this should work:

http://orgmode.org/manual/Images-and-tables.html:

,----
|      #+CAPTION: This is the caption for the next figure link (or table)
|      #+NAME:   fig:SED-HR4049
|      [[./img/a.jpg]]
`----

So maybe check if this is part of a construct with a CAPTION or if it
really is used as an input somewhere?

4) references where :FILE is a normal PROPERTY: (or isn't it?)

,----
| ** Koivusalo2002 - Snow processes in a forest clearing and in a coniferous forest
| :PROPERTIES:
| :TITLE:    Snow processes in a forest clearing and in a coniferous forest
| :BTYPE:    article
| :CUSTOM_ID: Koivusalo2002
| :AUTHOR:   Koivusalo, H. and Kokkonen, T.
| :DOI:      10.1016/S0022-1694(02)00031-8
| :FILE:     file:./Literature/Koivusalo_2002.pdf
| :ISSN:     00221694
| :JOURNAL:  Journal of Hydrology
| :KEYWORDS: energy,forest,mathematical models,melt,snow,uxes
| :MENDELEY-GROUPS: Energy Balance,bibliography
| :MONTH:    may
| :NUMBER:   1-4
| :PAGES:    145--164
| :URL:      http://linkinghub.elsevier.com/retrieve/pii/S0022169402000318
| :VOLUME:   262
| :YEAR:     2002
| :END:
| [[file:Literature/Koivusalo2002.pdf]]
`----

results in

,----
|  11221 high  Special property "FILE" found in a properties drawer
`----

That is all I can see at the moment.


Here is the ECM:

--8<---------------cut here---------------start------------->8---
#+PROPERTY: header-args  :tangle-mode (identity #o444)
#+PROPERTY: header-args  :tangle-mode (identity #o444)
#+PROPERTY: header-args+ :tangle no

* file-ext


#+begin_src R  :exports results :file-ext pdf :results graphics :width 8 :height 8
cat(23)
#+end_src

* And the : in NAME

#+CAPTION: The caption
#+NAME: fig:sensDefault
#+RESULTS: fig_sensDefault
[[file:./output/fig_sensDefault.pdf]]

* References

** Mahat2013 - Testing above- and below-canopy representations of turbulent fluxes in an energy balance snowmelt model
:PROPERTIES:
:TITLE:    Testing above- and below-canopy representations of turbulent fluxes in an energy balance snowmelt model
:BTYPE:    article
:CUSTOM_ID: Mahat2013
:AUTHOR:   Mahat, Vinod and Tarboton, David G. and Molotch, Noah P.
:DOI:      10.1002/wrcr.20073
:FILE:     :Users/rainerkrug/Documents/Mendeley/Files/Mahat, Tarboton, Molotch/Mahat, Tarboton, Molotch\_2013\_Testing above- and below-canopy representations of turbulent fluxes in an energy balance snowmelt model.pdf:pdf
:ISSN:     00431397
:JOURNAL:  Water Resources Research
:MONTH:    feb
:NUMBER:   2
:PAGES:    1107--1122
:URL:      http://doi.wiley.com/10.1002/wrcr.20073
:VOLUME:   49
:YEAR:     2013
:END:
[[file:Literature/Mahat2013.pdf]]
--8<---------------cut here---------------end--------------->8---

which results in
,----
|      3 high  Unknown header argument ""
|      8 high  Unknown header argument "file-ext"
|     15 high  Name "fig:sensDefault" contains a colon; Babel cannot use it as input
|     17 low   Link to non-existent local file "./output/fig_sensDefault.pdf"
|     28 high  Special property "FILE" found in a properties drawer
|     38 low   Link to non-existent local file "Literature/Mahat2013.pdf"
`----

The "Link to non-existent ..." are obvious.

I am really happy with org-lint - thanks a lot. This makes working with
org files much easier.

Thanks,

Rainer

>
> Regards,

-- 
Rainer M. Krug, PhD (Conservation Ecology, SUN), MSc (Conservation Biology, UCT), Dipl. Phys. (Germany)

Centre of Excellence for Invasion Biology
Stellenbosch University
South Africa

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email:      Rainer@krugs.de

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