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From: tsd@tsdye.com (Thomas S. Dye)
To: emacs-orgmode@gnu.org
Subject: Re: Bug? R: Org babel block execution *drastically* slower than in ESS session directly
Date: Tue, 13 Nov 2012 22:28:08 -1000	[thread overview]
Message-ID: <m1haosmvvr.fsf@tsdye.com> (raw)
In-Reply-To: <87a9ukr8xy.fsf@gmail.com> (Aaron Ecay's message of "Wed, 14 Nov 2012 01:32:25 -0500")

Aloha Aaron,

Welcome to Org-mode.

Aaron Ecay <aaronecay@gmail.com> writes:

> 2012ko azaroak 13an, John Hendy-ek idatzi zuen:
>
> [...]
>> Crazy. I really wondered if it had something to do with trying to spit
>> out the results into the minibuffer. Why is that behavior included?
>
> “:results silent” just means “silent except for the minibuffer”; IDK
> why.

I think "silent" has to do with the Org buffer that contains the source
code block.  Non-silent blocks do something in the buffer.  This was,
for me, one of the amazing things about babel when it was being
developed.  One could "speak" any language and have sensible results
written back to a plain text file.

>
>> Are you sure it's only on file import? I was generating some large
>> output when I first experienced this.
>
> Yes, that’s what I meant (and didn’t explain well).  Org writes R’s
> output to a file, and then imports it into Emacs (to print in the
> minibuffer).  But it also does an expensive transformation before
> printing it – whence the slowdown.
>
>> I have to
>> change to the R buffer to see if there were any errors.
>
> I agree that this is sub-optimal.
>
> I seem to remember that ob-R.el is unmaintained (or was at some point in
> the past).  Once there is consensus on what a fix should look like, I
> can attempt to produce a patch implementing it.  And I’ll take a crack
> at error reporting in the minibuffer too.

Yes, ob-R.el is currently without a maintainer. My sense and experience
is that Eric S. is happy to entertain patches to the various ob language
files.  My experience is also that active maintainers welcome
patches--I don't think there is a barrier to patch proposals.

I can help with documentation if your patch results in some substantive
changes to R support in babel.  Please don't hesitate to ask if need be.

All the best,
Tom

-- 
Thomas S. Dye
http://www.tsdye.com

  reply	other threads:[~2012-11-14  8:28 UTC|newest]

Thread overview: 217+ messages / expand[flat|nested]  mbox.gz  Atom feed  top
2012-10-31  6:12 Bug? R: Org babel block execution *drastically* slower than in ESS session directly John Hendy
2012-10-31 16:41 ` cberry
2012-10-31 17:18   ` John Hendy
2012-10-31 20:12     ` cberry
2012-10-31 20:23       ` John Hendy
2012-10-31 20:56         ` Thomas S. Dye
2012-10-31 23:00           ` Nick Dokos
2012-10-31 22:53         ` Nick Dokos
2012-11-01 14:53           ` John Hendy
2012-11-01 15:38             ` Nick Dokos
2012-11-01 18:17               ` John Hendy
2012-11-01 18:18               ` John Hendy
2012-11-01 18:48                 ` Nick Dokos
2012-11-14  3:27                   ` Aaron Ecay
2012-11-14  4:52                     ` John Hendy
2012-11-14  6:32                       ` Aaron Ecay
2012-11-14  8:28                         ` Thomas S. Dye [this message]
2012-11-14  8:35                           ` Andreas Leha
2012-11-16 15:45                             ` Eric Schulte
2012-11-16 17:47                               ` Andreas Leha
2012-11-16 19:00                                 ` John Hendy
2012-11-16 20:25                                 ` Achim Gratz
2012-11-17 17:12                                   ` Eric Schulte
2012-11-18  0:41                               ` Aaron Ecay
2012-11-18  0:57                                 ` Eric Schulte
2012-11-18  1:41                                   ` Aaron Ecay
2012-11-19  1:18                                     ` Eric Schulte
2012-11-19  5:11                                       ` Eric Schulte
  -- strict thread matches above, loose matches on Subject: below --
2013-03-19 21:40 python sessions Gary Oberbrunner
2013-03-20  0:04 ` John Hendy
2013-03-20  3:07   ` Nick Dokos
2013-03-20  6:44     ` Andreas Röhler
2013-03-20 12:54       ` Ista Zahn
2013-03-20 14:08         ` Nick Dokos
2013-03-20 14:28           ` Gary Oberbrunner
2013-03-20 17:21         ` Andreas Röhler
2013-03-20  7:08   ` Andreas Röhler
2013-03-20 15:38     ` John Hendy
2013-03-20 15:42       ` John Hendy
2013-03-20 16:06       ` Nick Dokos
     [not found]         ` <CAFChFygsUeBejEY6m2bSU0C5cjLYz0nUADH=s+BYxajfZ2sKKQ@mail.gmail.com>
2013-03-20 16:12           ` Fwd: " Gary Oberbrunner
2013-03-20 17:08         ` Andreas Röhler
2013-03-20 17:25           ` Nick Dokos
2013-03-20 17:54             ` John Hendy
2013-03-20 18:15               ` Nick Dokos
2013-03-20 18:32                 ` Ista Zahn
2013-03-20 18:39                   ` Nick Dokos
2013-03-20 18:43                   ` Andreas Röhler
2013-03-20 19:42                     ` Ista Zahn
2013-03-20 19:53                       ` Andreas Röhler
2013-03-20 20:12                         ` Ista Zahn
2013-03-20 20:25                           ` Gary Oberbrunner
2013-03-20 22:06                             ` Ista Zahn
2013-03-20 18:42                 ` Andreas Röhler
2013-03-20 19:01             ` Andreas Röhler
     [not found]       ` <CAFChFygPrhuHHyMo2Vk2_OdksWVB=oACA7jnOXN+itUNqh-nqw@mail.gmail.com>
     [not found]         ` <CA+M2ft9bO7DU61vVeYrhduVvkg1V6PMuiyvsOy5tNWuXcSUEpw@mail.gmail.com>
     [not found]           ` <CAFChFyhbeXE4HNLKA6Ubii+MtQwD7=4khAypa+--coZrQiJekA@mail.gmail.com>
2013-03-21  1:22             ` Gary Oberbrunner
2013-03-21  1:54               ` John Hendy
2013-03-21  1:56                 ` Gary Oberbrunner
2013-03-21  7:42                   ` Andreas Röhler
2013-03-21  7:43                     ` Bastien
2013-03-21  8:13                       ` Andreas Röhler
2013-03-23 22:07                         ` Eric Schulte
2013-03-24  1:29                           ` John Hendy
2013-03-24 22:59                             ` Eric Schulte
2013-03-25  2:38                               ` Nick Dokos
2013-03-25  2:59                                 ` John Hendy
2013-03-25  6:34                                   ` Andreas Röhler
2013-03-25 15:40                                   ` Eric Schulte
2013-03-25 15:55                                     ` John Hendy
2013-03-25 16:07                                       ` Eric Schulte
2013-03-25 16:41                                         ` Nick Dokos
2013-03-25 16:01                                     ` Ista Zahn
2013-03-25 16:23                                       ` John Hendy
2013-03-25 16:43                                         ` Eric Schulte
2013-03-25 17:27                                           ` Andreas Röhler
2013-03-25 17:41                                             ` John Hendy
2013-03-25 18:16                                               ` Ista Zahn
2013-03-25 19:30                                             ` Ivan Andrus
2013-03-24  7:47                           ` Andreas Röhler
2013-03-24 14:47                             ` John Hendy
2013-03-24 15:30                               ` Andreas Röhler
2013-03-24 16:58                               ` Nick Dokos
2013-03-24 16:59                                 ` John Hendy
2013-03-24 18:41                                   ` Nick Dokos
2013-03-25 20:46                                     ` Andreas Röhler
2013-03-25 21:37                                       ` Eric Schulte
2013-03-26  6:29                                         ` Andreas Röhler
2013-03-26 12:32                                           ` Eric Schulte
2013-03-26 21:41                                             ` Gary Oberbrunner
2013-03-26 21:47                                               ` John Hendy
2013-03-27  6:19                                               ` Andreas Röhler
2013-03-30  7:19                                                 ` Andreas Röhler
2012-08-26 20:11 Alternate format for datetree c b
2012-08-27  1:16 ` John Hendy
2012-08-27  4:04   ` Nick Dokos
2012-08-27  6:08     ` John Hendy
2012-08-28  8:49       ` Ian Barton
2012-08-28 12:49         ` Nick Dokos
2012-08-28 12:50         ` Nick Dokos
2012-08-29  7:49           ` Ian Barton
     [not found]             ` <lists@manor-farm.org>
2012-08-29 14:17               ` Nick Dokos
2012-08-29 14:25             ` John Hendy
2012-08-29 20:01               ` Ian Barton
2012-09-06  7:46                 ` Ian Barton
2012-09-06  5:42       ` c b
2012-09-06  6:26         ` Nick Dokos
2012-09-06  7:00         ` Jambunathan K
2012-09-06 15:33         ` John Hendy
2012-09-06 16:08           ` Jonathan Leech-Pepin
2011-11-02  2:22 Pass LaTeX exporter option prior to \documentclass John Hendy
2011-11-02  2:43 ` suvayu ali
2011-11-02 10:30   ` suvayu ali
2011-11-03 17:48     ` John Hendy
2011-11-03 17:55       ` suvayu ali
2011-11-03 18:07         ` John Hendy
2011-11-04 17:29           ` Nick Dokos
2011-11-04 19:29             ` suvayu ali
2011-10-19 14:54 Prompt for time when clocking in? Nathan Neff
2011-10-19 15:12 ` John Hendy
2011-10-19 15:35   ` Nick Dokos
2011-10-20 16:15     ` Nathan Neff
2011-10-20 17:09       ` Nick Dokos
2011-10-20 17:44         ` Nathan Neff
2011-10-19 16:37 ` Bernt Hansen
2011-08-05 22:15 Handling errors in command line exporting of agenda? John Hendy
2011-08-05 23:34 ` suvayu ali
2011-08-05 23:35   ` suvayu ali
2011-08-08 18:12   ` John Hendy
2011-08-08 18:28     ` suvayu ali
2011-08-08 18:53       ` John Hendy
2011-08-08 18:59         ` suvayu ali
2011-08-08 19:48           ` John Hendy
2011-08-08 20:22             ` suvayu ali
2011-08-08 20:31               ` John Hendy
2011-08-08 20:33               ` Nick Dokos
2011-08-08 20:37             ` Nick Dokos
2011-08-08 20:54               ` John Hendy
2011-08-08 21:09                 ` Nick Dokos
2011-08-08 21:27                   ` John Hendy
2011-08-08 21:30               ` suvayu ali
2011-08-08 22:17                 ` Nick Dokos
2011-08-08 21:46             ` suvayu ali
2011-06-15 10:29 BUG: Newest org-mode interferes with desktop save Rainer M Krug
2011-06-15 16:49 ` Eric Schulte
2011-06-15 17:35   ` Nick Dokos
2011-06-15 18:23     ` Rainer M Krug
2011-06-15 18:21   ` Rainer M Krug
2011-06-15 18:31     ` Eric Schulte
2011-06-15 18:59       ` Rainer M Krug
2011-06-15 22:40         ` Nick Dokos
2011-06-16  7:15           ` Rainer M Krug
2011-06-16  7:29             ` Jambunathan K
2011-06-16  8:22               ` Rainer M Krug
2011-05-24 15:54 Passing font size to exported LaTeX table John Hendy
2011-05-24 16:44 ` Sebastien Vauban
2011-05-24 18:57   ` John Hendy
2011-05-24 19:25     ` Nick Dokos
2011-05-24 19:31       ` John Hendy
2011-05-24 19:58         ` Thomas S. Dye
2011-05-24 20:42           ` Nick Dokos
2011-05-24 21:12             ` Nick Dokos
2011-05-24 21:19               ` Nick Dokos
2011-05-25  7:22                 ` Thomas S. Dye
2011-05-27  0:58                   ` suvayu ali
2011-05-27  6:46                     ` Thomas S. Dye
2011-05-27  7:07                       ` suvayu ali
2011-05-27 16:17                         ` Thomas S. Dye
2011-05-27 16:50                           ` Suvayu Ali
2011-05-27 17:37                             ` Thomas S. Dye
2011-05-27 18:30                               ` Suvayu Ali
2011-05-27 21:25                                 ` Thomas S. Dye
2011-05-28  7:17                                   ` Sebastien Vauban
2011-05-28 10:14                                     ` Suvayu Ali
2011-05-28 15:21                                       ` Nick Dokos
2011-05-28 18:10                                         ` Suvayu Ali
2011-06-01 18:50                                   ` Nick Dokos
2011-06-01 19:08                                     ` Suvayu Ali
2011-06-10 22:31                                       ` Suvayu Ali
2011-06-13  1:38                                         ` suvayu ali
2011-06-13  1:52                                         ` Nick Dokos
2011-06-13  2:40                                           ` Suvayu Ali
2011-06-13  3:29                                             ` Nick Dokos
2011-06-13  3:45                                           ` Thomas S. Dye
2011-06-13  4:27                                             ` Nick Dokos
2011-06-13  4:56                                               ` Suvayu Ali
2011-06-13  5:29                                                 ` Nick Dokos
2011-06-13  6:42                                                   ` Suvayu Ali
2011-05-24 20:06         ` Nick Dokos
2011-05-24 19:42       ` Sebastien Vauban
2010-08-21 19:30 Gnuplot unevenly spaced non-numeric data plot? John Hendy
2010-08-21 20:35 ` Eric S Fraga
2010-08-21 20:41 ` Nick Dokos
2010-08-21 21:11   ` John Hendy
2010-08-21 22:41     ` John Hendy
2010-08-21 23:17       ` Nick Dokos
2010-08-23 14:22         ` John Hendy
2010-08-23 15:16           ` Nick Dokos
     [not found]             ` <AANLkTi=WTLBL1Giq0GTrjCo-A1s=iP4u1Qxn57cH-xnB@mail.gmail.com>
     [not found]               ` <AANLkTimSVm=-2o39CQ9wSMT276Dee4Tuj9jLKJH-c+cd@mail.gmail.com>
2010-08-24  2:44                 ` [For Worg?] " John Hendy
2010-08-24  5:25                   ` suvayu ali
2010-08-24  5:56               ` Nick Dokos
2010-08-25  0:32                 ` Eric Schulte
2010-08-25  1:06                   ` John Hendy
2010-08-25  1:35                     ` Eric Schulte
2010-08-25 18:38                       ` John Hendy
2010-08-25 18:52                         ` Eric Schulte
     [not found]         ` <jw.hendy@gmail.com>
2012-03-12 21:13           ` Beamer specific setupfile? John Hendy
2012-03-12 21:48             ` Nick Dokos
2012-03-12 22:09               ` John Hendy
2012-03-12 22:30                 ` Nick Dokos
2012-03-12 22:44                   ` Nick Dokos
2012-03-13  5:02                     ` John Hendy
2012-03-13  5:46                       ` Nick Dokos
2012-04-25  8:16                         ` Eric Fraga
2012-04-25  8:59                           ` Eric Fraga
2012-03-12 23:01                 ` Nick Dokos
2012-03-12 21:51             ` Nick Dokos
2012-03-12 22:05             ` Nick Dokos

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