#+OPTIONS: author:nil
#+TITLE: My fancy title

* Finite element conditions
- Note taken on [2017-02-16 Thu 23:35] \\
  3% strain via a load curve (relaxed for viscoelastic case)
  fiber direction (\lambda) as a function of time for each element
** One-element test
- Elongated from 0 to 100% from $t=0$ s to $t=1$ s
- The elongation was held constant and the stress relaxed until $t=3$ s

** Stress relaxation
- 125 elements (5\times5\times5)
- Same conditions as [[tab:coeff]]
  #+NAME: tab:coeff
  #+CAPTION: Coefficients
  | G_{e} | G_{0} | N_{d} | I_{0} |
  | (MPa) | (MPa) | ?     | ?     |
  |-------+-------+-------+-------|
  | 0.429 | 1.0   | 6     |     0 |
- Displacement boundary conditions
- Stretched from 0 to 3% in 5 s, followed by 1.5% ~ 3.0% cyclic strain
  @ 0.1 Hz
- Timestepping adjusted to ensure solution at each peak and valley
** Model
*** Bodies
- Rigid bodies
- 6 DOF
- Position by load curves (functions of time)

  #+BEGIN_QUOTE
  This requires storage for a symmetric 2nd order tensor at each
  integration point for each element, at each previous timestep.
  #+END_QUOTE

    $$ \int_{a}^{b}{f(x)\,g(x)\d{x}}\big. = f(\xi{})\,\int_{a}^{b}{g(x)\d{x}}\big. \qquad a < \xi{} < b$$

Referencing my code [[blk-test]]

#+NAME: blk-test
#+CAPTION: My block
#+BEGIN_SRC python
  import numpy as np

  a = np.zeros([3,3])
#+END_SRC

#+CAPTION: clamping
[[file:../Figures/KrentzGeom/clampingInitial.png]]
# https://www.reddit.com/r/emacs/comments/418rzk/how_to_use_orgmode_to_write_documentation_for/
# https://www.wisdomandwonder.com/link/9922/how-to-reintegrate-changes-for-word-back-into-org-mode
# http://kitchingroup.cheme.cmu.edu/blog/2014/07/17/Pandoc-does-org-mode-now/
# http://pandoc.org/demos.html

* Configuration                                    :noexport:
#+OPTIONS: tex:dvipng

** First alternative
To get a working file, first set the ~#+OPTIONS: dvipng~ somewhere, then export to odt with Org-mode
(~C-c C-e o o~), and run this (you can do ~C-c C-c~
on it; make sure that LibreOffice is not running)
#+BEGIN_SRC shell :results none
 libreoffice --headless --convert-to doc ./doc-convert.odt
#+END_SRC

** Other alternatives:

#+BEGIN_SRC bash
  pandoc -s -S --bibliography=../../References.bib wcb2018-abstract.org -o wcb2018-abstract.doc
  pandoc -f org+smart --bibliography=../../References.bib wcb2018-abstract.org -o wcb2018-abstract.doc
  pandoc -f org+smart wcb2018-abstract.org -t docx+smart -o wcb2018-abstract.docx
#+END_SRC

#+BEGIN_SRC emacs-lisp :exports none :eval no-export
  ;; http://kitchingroup.cheme.cmu.edu/blog/2015/01/29/Export-org-mode-to-docx-with-citations-via-pandoc/
  (defun helm-bibtex-format-pandoc-citation (keys)
    (concat "[" (mapconcat (lambda (key) (concat "@" key)) keys "; ") "]"))

  ;; inform helm-bibtex how to format the citation in org-mode
  (setf (cdr (assoc 'org-mode helm-bibtex-format-citation-functions))
        'helm-bibtex-format-pandoc-citation)

  (defun ox-export-to-docx-and-open ()
    "Export the current org file as a docx via markdown."
    (interactive)
    (let* ((bibfile (expand-file-name (car (org-ref-find-bibliography))))
           ;; this is probably a full path
           (current-file (buffer-file-name))
           (basename (file-name-sans-extension current-file))
           (docx-file (concat basename ".docx")))
      (save-buffer)
      (when (file-exists-p docx-file) (delete-file docx-file))
      (shell-command (format
                      "pandoc -s -S --bibliography=%s %s -o %s"
                      bibfile current-file docx-file))
      (org-open-file docx-file '(16))))

#+END_SRC

** General options
   - Import symbols
     #+LaTeX_HEADER: \input{../Reports/symbols.tex}
   - Show all headings on startup
     #+STARTUP: content
   - No table of contents
     #+OPTIONS: toc:nil
   - Use python3, do not evaluate when exporting and create
     a session (all blocks are connected)
     #+PROPERTY: header-args:python :python python3 :eval no-export :session
   - Substitute "Listings" for "Blocks" when exporting code to LaTeX
     # http://stackoverflow.com/questions/2814714/
     #+LATEX_HEADER: \renewcommand\lstlistingname{Block}
     #+LATEX_HEADER: \renewcommand\lstlistlistingname{Code blocks}
     #+LATEX_HEADER: \def\lstlistingautorefname{Blk.}

** Change the resolution of the exported equations (and previews)
  - Use dvipng to export
  #+OPTIONS: tex:dvipng

* Local variables                                          :ARCHIVE:noexport:
  # https://stackoverflow.com/a/20033865
  # Local Variables:
  # coding: utf-8
  # org-format-latex-options: (plist-put org-format-latex-options :scale 1.5)
  # End:

*** COMMENT If you want more control, use this
   # #+OPTIONS: tex:imagemagick
   # # org-format-latex-options: (plist-put org-format-latex-options :scale 10)