1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
| | ;;; ob-fortran.el --- Babel Functions for Fortran -*- lexical-binding: t; -*-
;; Copyright (C) 2011-2021 Free Software Foundation, Inc.
;; Authors: Sergey Litvinov
;; Eric Schulte
;; Keywords: literate programming, reproducible research, fortran
;; Homepage: https://orgmode.org
;; This file is part of GNU Emacs.
;;
;; GNU Emacs is free software: you can redistribute it and/or modify
;; it under the terms of the GNU General Public License as published by
;; the Free Software Foundation, either version 3 of the License, or
;; (at your option) any later version.
;; GNU Emacs is distributed in the hope that it will be useful,
;; but WITHOUT ANY WARRANTY; without even the implied warranty of
;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
;; GNU General Public License for more details.
;; You should have received a copy of the GNU General Public License
;; along with GNU Emacs. If not, see <https://www.gnu.org/licenses/>.
;;; Commentary:
;; Org-Babel support for evaluating fortran code.
;;; Code:
(require 'ob)
(require 'org-macs)
(require 'cc-mode)
(require 'cl-lib)
(declare-function org-entry-get "org"
(pom property &optional inherit literal-nil))
(defvar org-babel-tangle-lang-exts)
(add-to-list 'org-babel-tangle-lang-exts '("fortran" . "F90"))
(defvar org-babel-default-header-args:fortran '())
(defcustom org-babel-fortran-compiler "gfortran"
"fortran command used to compile a fortran source code file into an
executable."
:group 'org-babel
:type 'string)
(defun org-babel-execute:fortran (body params)
"This function should only be called by `org-babel-execute:fortran'."
(let* ((tmp-src-file (org-babel-temp-file "fortran-src-" ".F90"))
(tmp-bin-file (org-babel-temp-file "fortran-bin-" org-babel-exeext))
(cmdline (cdr (assq :cmdline params)))
(flags (cdr (assq :flags params)))
(full-body (org-babel-expand-body:fortran body params)))
(with-temp-file tmp-src-file (insert full-body))
(org-babel-eval
(format "%s -o %s %s %s"
org-babel-fortran-compiler
(org-babel-process-file-name tmp-bin-file)
(mapconcat 'identity
(if (listp flags) flags (list flags)) " ")
(org-babel-process-file-name tmp-src-file)) "")
(let ((results
(org-trim
(org-remove-indentation
(org-babel-eval
(concat tmp-bin-file (if cmdline (concat " " cmdline) "")) "")))))
(org-babel-reassemble-table
(org-babel-result-cond (cdr (assq :result-params params))
(org-babel-read results)
(let ((tmp-file (org-babel-temp-file "f-")))
(with-temp-file tmp-file (insert results))
(org-babel-import-elisp-from-file tmp-file)))
(org-babel-pick-name
(cdr (assq :colname-names params)) (cdr (assq :colnames params)))
(org-babel-pick-name
(cdr (assq :rowname-names params)) (cdr (assq :rownames params)))))))
(defun org-babel-expand-body:fortran (body params)
"Expand a block of fortran or fortran code with org-babel according to
its header arguments."
(let ((vars (org-babel--get-vars params))
(main-p (not (string= (cdr (assq :main params)) "no")))
(includes (or (cdr (assq :includes params))
(org-babel-read (org-entry-get nil "includes" t))))
(defines (org-babel-read
(or (cdr (assq :defines params))
(org-babel-read (org-entry-get nil "defines" t))))))
(mapconcat 'identity
(list
;; includes
(mapconcat
(lambda (inc) (format "#include %s" inc))
(if (listp includes) includes (list includes)) "\n")
;; defines
(mapconcat
(lambda (inc) (format "#define %s" inc))
(if (listp defines) defines (list defines)) "\n")
;; body
(if main-p
(org-babel-fortran-ensure-main-wrap
(concat
;; variables
(mapconcat 'org-babel-fortran-var-to-fortran vars "\n")
body)
params)
body) "\n") "\n")))
(defun org-babel-fortran-ensure-main-wrap (body params)
"Wrap body in a \"program ... end program\" block if none exists."
(if (string-match "^[ \t]*program\\>" (capitalize body))
(let ((vars (org-babel--get-vars params)))
(when vars (error "Cannot use :vars if `program' statement is present"))
body)
(format "program main\n%s\nend program main\n" body)))
(defun org-babel-prep-session:fortran (_session _params)
"This function does nothing as fortran is a compiled language with no
support for sessions."
(error "Fortran is a compiled languages -- no support for sessions"))
(defun org-babel-load-session:fortran (_session _body _params)
"This function does nothing as fortran is a compiled language with no
support for sessions."
(error "Fortran is a compiled languages -- no support for sessions"))
;; helper functions
(defun org-babel-fortran-var-to-fortran (pair)
"Convert an elisp val into a string of fortran code specifying a var
of the same value."
;; TODO list support
(let ((var (car pair))
(val (cdr pair)))
(when (symbolp val)
(setq val (symbol-name val))
(when (= (length val) 1)
(setq val (string-to-char val))))
(cond
((integerp val)
(format "integer, parameter :: %S = %S\n" var val))
((floatp val)
(format "real, parameter :: %S = %S\n" var val))
((or (integerp val))
(format "character, parameter :: %S = '%S'\n" var val))
((stringp val)
(format "character(len=%d), parameter :: %S = '%s'\n"
(length val) var val))
;; val is a matrix
((and (listp val) (cl-every #'listp val))
(format "real, parameter :: %S(%d,%d) = transpose( reshape( %s , (/ %d, %d /) ) )\n"
var (length val) (length (car val))
(org-babel-fortran-transform-list val)
(length (car val)) (length val)))
((listp val)
(format "real, parameter :: %S(%d) = %s\n"
var (length val) (org-babel-fortran-transform-list val)))
(t
(error "the type of parameter %s is not supported by ob-fortran" var)))))
(defun org-babel-fortran-transform-list (val)
"Return a fortran representation of enclose syntactic lists."
(if (listp val)
(concat "(/" (mapconcat #'org-babel-fortran-transform-list val ", ") "/)")
(format "%S" val)))
(provide 'ob-fortran)
;;; ob-fortran.el ends here
|