* suppress leading ":" in org-babel output
@ 2019-05-27 7:13 Jeremie Juste
2019-05-28 2:17 ` Nick Dokos
0 siblings, 1 reply; 6+ messages in thread
From: Jeremie Juste @ 2019-05-27 7:13 UTC (permalink / raw)
To: emacs-orgmode
Hello,
I recall seeing this thread on the mailing list but I cannot find it
back.
I would like to suppress the first line leading ":" in the following output
#+NAME:mean_purchase_per_shopping_trip
#+BEGIN_SRC R :var x=6 :results output :session *R*
a <-sprintf("%.2f",12.234324)
cat(a,sep="\n")
#+END_SRC
#+RESULTS: mean_purchase_per_shopping_trip
:
: 12.23
Best regards,
Jeremie
Org mode version 9.2.1 (9.2.1-8-g1b1797-elpaplus @
/home/djj/.emacs.d/elpa/org-plus-contrib-20190211/)
GNU Emacs 26.2 (build 1, x86_64-pc-linux-gnu, GTK+ Version 3.22.11) of 2019-05-16
^ permalink raw reply [flat|nested] 6+ messages in thread
* Re: suppress leading ":" in org-babel output
2019-05-27 7:13 suppress leading ":" in org-babel output Jeremie Juste
@ 2019-05-28 2:17 ` Nick Dokos
2019-05-28 16:57 ` Berry, Charles
2019-05-31 7:05 ` Jeremie Juste
0 siblings, 2 replies; 6+ messages in thread
From: Nick Dokos @ 2019-05-28 2:17 UTC (permalink / raw)
To: emacs-orgmode
Jeremie Juste <jeremiejuste@gmail.com> writes:
> Hello,
>
> I recall seeing this thread on the mailing list but I cannot find it
> back.
>
> I would like to suppress the first line leading ":" in the following output
>
>
> #+NAME:mean_purchase_per_shopping_trip
>
> #+BEGIN_SRC R :var x=6 :results output :session *R*
> a <-sprintf("%.2f",12.234324)
> cat(a,sep="\n")
> #+END_SRC
>
> #+RESULTS: mean_purchase_per_shopping_trip
> :
>
> : 12.23
>
FWIW, I just get the last line:
#+NAME:mean_purchase_per_shopping_trip
#+BEGIN_SRC R :var x=6 :results output :session *R*
a <-sprintf("%.2f",12.234324)
cat(a,sep="\n")
#+END_SRC
#+RESULTS:
: 12.23
This is with
GNU Emacs 27.0.50 (build 1, x86_64-pc-linux-gnu, GTK+ Version 2.24.32) of 2019-05-01
Org mode version 9.2.3 (release_9.2.3-367-gd79e80 @ /home/nick/elisp/org-mode/lisp/)
R version 3.5.3 (2019-03-11) -- "Great Truth"
on Fedora 29.
--
Nick
"There are only two hard problems in computer science: cache
invalidation, naming things, and off-by-one errors." -Martin Fowler
^ permalink raw reply [flat|nested] 6+ messages in thread
* Re: suppress leading ":" in org-babel output
2019-05-28 2:17 ` Nick Dokos
@ 2019-05-28 16:57 ` Berry, Charles
2019-05-29 22:00 ` Nick Dokos
2019-05-31 7:05 ` Jeremie Juste
1 sibling, 1 reply; 6+ messages in thread
From: Berry, Charles @ 2019-05-28 16:57 UTC (permalink / raw)
To: Nick Dokos; +Cc: emacs-orgmode@gnu.org
> On May 27, 2019, at 7:17 PM, Nick Dokos <ndokos@gmail.com> wrote:
>
> Jeremie Juste <jeremiejuste@gmail.com> writes:
>
>> Hello,
>>
>> I recall seeing this thread on the mailing list but I cannot find it
>> back.
>>
>> I would like to suppress the first line leading ":" in the following output
>>
>>
>> #+NAME:mean_purchase_per_shopping_trip
>>
>> #+BEGIN_SRC R :var x=6 :results output :session *R*
>> a <-sprintf("%.2f",12.234324)
>> cat(a,sep="\n")
>> #+END_SRC
>>
>> #+RESULTS: mean_purchase_per_shopping_trip
>> :
>>
>> : 12.23
>>
>
> FWIW, I just get the last line:
>
> #+NAME:mean_purchase_per_shopping_trip
>
> #+BEGIN_SRC R :var x=6 :results output :session *R*
> a <-sprintf("%.2f",12.234324)
> cat(a,sep="\n")
> #+END_SRC
>
> #+RESULTS:
> : 12.23
>
> This is with
>
> GNU Emacs 27.0.50 (build 1, x86_64-pc-linux-gnu, GTK+ Version 2.24.32) of 2019-05-01
> Org mode version 9.2.3 (release_9.2.3-367-gd79e80 @ /home/nick/elisp/org-mode/lisp/)
> R version 3.5.3 (2019-03-11) -- "Great Truth"
>
> on Fedora 29.
>
I get what Jeremie reports (but he has a blank line inserted after the first line, IIUC)
This is with:
GNU Emacs 26.1
Org 9.2.3
ess-version: 18.10.3
R version 3.6.0 (2019-04-26)
I believe this is new-ish behavior. I see some older files without the extra line. Also, I think there are recent changes in ESS that pertain to comint sessions.
FWIW, here is a clip from my session:
--8<---------------cut here---------------start------------->8---
> x <- 6L
a <-sprintf("%.2f",12.234324)
cat(a,sep="\n")
'org_babel_R_eoe'
> >
12.23
>
[1] "org_babel_R_eoe"
--8<---------------cut here---------------end--------------->8---
If Nick sees something different maybe a change in ESS is the culprit.
Not sure what the right path forward is ob-R.el, but as a workaround the OP can use a :post header arg to strip the offending line.
HTH,
Chuck
^ permalink raw reply [flat|nested] 6+ messages in thread
* Re: suppress leading ":" in org-babel output
2019-05-28 16:57 ` Berry, Charles
@ 2019-05-29 22:00 ` Nick Dokos
0 siblings, 0 replies; 6+ messages in thread
From: Nick Dokos @ 2019-05-29 22:00 UTC (permalink / raw)
To: emacs-orgmode
"Berry, Charles" <ccberry@ucsd.edu> writes:
>> On May 27, 2019, at 7:17 PM, Nick Dokos <ndokos@gmail.com> wrote:
>>
>> Jeremie Juste <jeremiejuste@gmail.com> writes:
>>
>>> Hello,
>>>
>>> I recall seeing this thread on the mailing list but I cannot find it
>>> back.
>>>
>>> I would like to suppress the first line leading ":" in the following output
>>>
>>>
>>> #+NAME:mean_purchase_per_shopping_trip
>>>
>>> #+BEGIN_SRC R :var x=6 :results output :session *R*
>>> a <-sprintf("%.2f",12.234324)
>>> cat(a,sep="\n")
>>> #+END_SRC
>>>
>>> #+RESULTS: mean_purchase_per_shopping_trip
>>> :
>>>
>>> : 12.23
>>>
>>
>> FWIW, I just get the last line:
>>
>> #+NAME:mean_purchase_per_shopping_trip
>>
>> #+BEGIN_SRC R :var x=6 :results output :session *R*
>> a <-sprintf("%.2f",12.234324)
>> cat(a,sep="\n")
>> #+END_SRC
>>
>> #+RESULTS:
>> : 12.23
>>
>> This is with
>>
>> GNU Emacs 27.0.50 (build 1, x86_64-pc-linux-gnu, GTK+ Version 2.24.32) of 2019-05-01
>> Org mode version 9.2.3 (release_9.2.3-367-gd79e80 @ /home/nick/elisp/org-mode/lisp/)
>> R version 3.5.3 (2019-03-11) -- "Great Truth"
>>
>> on Fedora 29.
>>
>
> I get what Jeremie reports (but he has a blank line inserted after the first line, IIUC)
>
> This is with:
>
> GNU Emacs 26.1
> Org 9.2.3
> ess-version: 18.10.3
> R version 3.6.0 (2019-04-26)
>
> I believe this is new-ish behavior. I see some older files without the
> extra line. Also, I think there are recent changes in ESS that pertain
> to comint sessions.
>
> FWIW, here is a clip from my session:
>
>> x <- 6L
> a <-sprintf("%.2f",12.234324)
> cat(a,sep="\n")
> 'org_babel_R_eoe'
>> >
> 12.23
>>
> [1] "org_babel_R_eoe"
>
>
> If Nick sees something different maybe a change in ESS is the culprit.
>
Here's what I see in the session buffer:
,----
| > > if (identical(getOption('pager'), file.path(R.home('bin'), 'pager'))) options(pager='cat') # rather take the ESS one
| > options(STERM='iESS', str.dendrogram.last="'", editor='emacsclient', show.error.locations=TRUE)
| > x <- 6L
| a <-sprintf("%.2f",12.234324)
| cat(a,sep="\n")
| 'org_babel_R_eoe'
| x <- 6L
| > a <-sprintf("%.2f",12.234324)
| > cat(a,sep="\n")
| 12.23
| > 'org_babel_R_eoe'
| [1] "org_babel_R_eoe"
| >
`----
--
Nick
"There are only two hard problems in computer science: cache
invalidation, naming things, and off-by-one errors." -Martin Fowler
^ permalink raw reply [flat|nested] 6+ messages in thread
* Re: suppress leading ":" in org-babel output
2019-05-28 2:17 ` Nick Dokos
2019-05-28 16:57 ` Berry, Charles
@ 2019-05-31 7:05 ` Jeremie Juste
2019-05-31 16:46 ` suppress leading ":" in org-babel outputariBLE Berry, Charles
1 sibling, 1 reply; 6+ messages in thread
From: Jeremie Juste @ 2019-05-31 7:05 UTC (permalink / raw)
To: Nick Dokos; +Cc: emacs-orgmode
Hello,
Many thanks updating org-mode resolved the issue
Best regards,
Jeremie
> FWIW, I just get the last line:
>
> #+NAME:mean_purchase_per_shopping_trip
>
> #+BEGIN_SRC R :var x=6 :results output :session *R*
> a <-sprintf("%.2f",12.234324)
> cat(a,sep="\n")
> #+END_SRC
>
> #+RESULTS:
> : 12.23
>
> This is with
>
> GNU Emacs 27.0.50 (build 1, x86_64-pc-linux-gnu, GTK+ Version 2.24.32) of 2019-05-01
> Org mode version 9.2.3 (release_9.2.3-367-gd79e80 @ /home/nick/elisp/org-mode/lisp/)
> R version 3.5.3 (2019-03-11) -- "Great Truth"
>
> on Fedora 29.
^ permalink raw reply [flat|nested] 6+ messages in thread
* Re: suppress leading ":" in org-babel outputariBLE
2019-05-31 7:05 ` Jeremie Juste
@ 2019-05-31 16:46 ` Berry, Charles
0 siblings, 0 replies; 6+ messages in thread
From: Berry, Charles @ 2019-05-31 16:46 UTC (permalink / raw)
To: Jeremie Juste; +Cc: Nick Dokos, emacs-orgmode@gnu.org
AFAICS, the latest update (99aa984) did NOT fix the issue.
There are complications in this story that I explain here.
If I start a fresh *R* session by eval'ing the src block, I get
#+RESULTS:
:
: 12.23
and the *R* buffer ends with
--8<---------------cut here---------------start------------->8---
> x <- 6L
a <-sprintf("%.2f",12.234324)
cat(a,sep="\n")
'org_babel_R_eoe'
> >
12.23
>
[1] "org_babel_R_eoe"
>
--8<---------------cut here---------------end--------------->8---
If I then open a buffer in ESS[R] mode and run ess-eval-line-visibly-and-step (e.g. by typing C-c C-n)
and then eval the src block again, I get
#+RESULTS:
: 12.23
and the *R* buffer ends with
--8<---------------cut here---------------start------------->8---
> x <- 6L
a <-sprintf("%.2f",12.234324)
cat(a,sep="\n")
'org_babel_R_eoe'
> > 12.23
> [1] "org_babel_R_eoe"
>
--8<---------------cut here---------------end--------------->8---
Presumably, a comint or ess variable has changed to effect these differences.
I am unable to discern what variable that is.
I suspect that the changed behavior Jeremie sees now was do to something similar and that a fresh start will result in the extraneous line in the results.
:-(
Chuck
> On May 31, 2019, at 12:05 AM, Jeremie Juste <jeremiejuste@gmail.com> wrote:
>
> Hello,
>
> Many thanks updating org-mode resolved the issue
>
> Best regards,
> Jeremie
>> FWIW, I just get the last line:
>>
>> #+NAME:mean_purchase_per_shopping_trip
>>
>> #+BEGIN_SRC R :var x=6 :results output :session *R*
>> a <-sprintf("%.2f",12.234324)
>> cat(a,sep="\n")
>> #+END_SRC
>>
>> #+RESULTS:
>> : 12.23
>>
>> This is with
>>
>> GNU Emacs 27.0.50 (build 1, x86_64-pc-linux-gnu, GTK+ Version 2.24.32) of 2019-05-01
>> Org mode version 9.2.3 (release_9.2.3-367-gd79e80 @ /home/nick/elisp/org-mode/lisp/)
>> R version 3.5.3 (2019-03-11) -- "Great Truth"
>>
>> on Fedora 29.
>
>
^ permalink raw reply [flat|nested] 6+ messages in thread
end of thread, other threads:[~2019-05-31 16:50 UTC | newest]
Thread overview: 6+ messages (download: mbox.gz / follow: Atom feed)
-- links below jump to the message on this page --
2019-05-27 7:13 suppress leading ":" in org-babel output Jeremie Juste
2019-05-28 2:17 ` Nick Dokos
2019-05-28 16:57 ` Berry, Charles
2019-05-29 22:00 ` Nick Dokos
2019-05-31 7:05 ` Jeremie Juste
2019-05-31 16:46 ` suppress leading ":" in org-babel outputariBLE Berry, Charles
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