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mx.microsoft.com 1; spf=pass smtp.mailfrom=health.ucsd.edu; dmarc=pass action=none header.from=health.ucsd.edu; dkim=pass header.d=health.ucsd.edu; arc=none DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=ucsdhs.onmicrosoft.com; s=selector2-ucsdhs-onmicrosoft-com; h=From:Date:Subject:Message-ID:Content-Type:MIME-Version:X-MS-Exchange-SenderADCheck; bh=mCMrEfDRPZfg9IAciR3058213qvZzP+01dbONE7S6q0=; b=TrTrPoeDN5RTnpeLjwU88ym8q4YQ/i2gpv4PHMXWl+O2zqAarwQhyMASNAXB7ud4wDw4BbKkwYB6ouTlEhTjUB0J4axblspetBM9Kg7hNdDmNVq8IpWg/YbKlWT+uP0km7bgw51GYVWHiFuaZdOxvvaIoaPkL5LciZB6jIqeNIM= From: "Berry, Charles" To: Greg Minshall CC: =?iso-8859-1?Q?Johan_Tol=F6?= , emacs-orgmode , Jeremie Juste Subject: Re: [BUG] ob-R.el: extra empty data.frame columns generated from plain lists after recent change [9.6 (release_9.6-3-ga4d38e @ /usr/share/emacs/30.0.50/lisp/org/)] Thread-Topic: [BUG] ob-R.el: extra empty data.frame columns generated from plain lists after recent change [9.6 (release_9.6-3-ga4d38e @ /usr/share/emacs/30.0.50/lisp/org/)] Thread-Index: AQHZCNthXE8TYYTx90Ss+lEgb1eVOg== Date: Mon, 5 Dec 2022 18:57:11 +0000 Message-ID: References: <87wn77mdvk.fsf@toloe.se> <765038.1670208188@archlinux> In-Reply-To: <765038.1670208188@archlinux> Accept-Language: en-US Content-Language: en-US X-MS-Has-Attach: X-MS-TNEF-Correlator: x-ms-publictraffictype: Email x-ms-traffictypediagnostic: BYAPR19MB2581:EE_|SA0PR19MB4270:EE_ x-ms-office365-filtering-correlation-id: 9e5f2794-4641-47af-8e9c-08dad6f28428 x-ms-exchange-senderadcheck: 1 x-ms-exchange-antispam-relay: 0 x-microsoft-antispam: BCL:0; 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List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: emacs-orgmode-bounces+larch=yhetil.org@gnu.org Sender: emacs-orgmode-bounces+larch=yhetil.org@gnu.org X-Migadu-Flow: FLOW_IN X-Migadu-Country: US ARC-Message-Signature: i=2; a=rsa-sha256; c=relaxed/relaxed; d=yhetil.org; s=key1; t=1670266731; h=from:from:sender:sender:reply-to:subject:subject:date:date: message-id:message-id:to:to:cc:cc:mime-version:mime-version: content-type:content-type: content-transfer-encoding:content-transfer-encoding: in-reply-to:in-reply-to:references:references:list-id:list-help: list-unsubscribe:list-subscribe:list-post:dkim-signature; bh=mCMrEfDRPZfg9IAciR3058213qvZzP+01dbONE7S6q0=; b=Pf7s7zDmix7iDd6BeTOAFoIVc40SSs/cLcpZppc+9ApQWie3ZBRgt4kvKV6GLBIgtcle3j ePuCmJipt/PFf6s5iKcuf9KHn9sgBxnypZOzM1L4zEc+ZmFTDGNLIotIo2LfqUmIWtpazS 9sik3gC+iSI2Sy4pyU7NYsrXM0p6XKUnFRvD4yOQOGds5IXhB7RGq0OBcc4QQf31o2C+af DvD3/LjZDfKBysyxut1wbtOww3vdpko0BrPpLvnforvsqVjPNM2NevoREEYhG1KHpp+RPF nIdRb919chCwNeXzu0V+vY+naEWVGILs5OH9ytf7UeVnk+NAveDo9f6PynlybA== ARC-Seal: i=2; s=key1; d=yhetil.org; t=1670266731; a=rsa-sha256; cv=pass; b=DVUPrhBCwZ6pHGnqcjpE24ggzKXBNikDwVn2C6AaXJVLSOKJ+T3yf/Ty/J5vsYdTcbB0kv psW2eBGtvnq00V1juYkMNJqSIeDSXR22+qTg3ukFLiD4mGzxFmdX3Lawl/DUU/SjgGeDwN JaG1WHv/kBkHYj4vtxl5imWPZTGxG4jOrorUNXnZVCzAy0GtRWJWiRWoaGSykJnuWAWZmf DsVMD+enHIwJlqNZPiH04+42E+5wo8VJRHPF04n8tFxB+rezucNhuFZkSIVC5P43Zkth6w x1Yf6OZm60uKi3dMl0kC4wOPROrxxpL/qC1+HJhsFu0hdYxbmVdVCXzF+iH+iw== ARC-Authentication-Results: i=2; aspmx1.migadu.com; dkim=pass header.d=ucsd.edu header.s=campus header.b=M83YZpUJ; dkim=pass header.d=ucsdhs.onmicrosoft.com header.s=selector2-ucsdhs-onmicrosoft-com header.b=TrTrPoeD; arc=pass ("microsoft.com:s=arcselector9901:i=1"); dmarc=pass (policy=none) header.from=ucsd.edu; spf=pass (aspmx1.migadu.com: domain of "emacs-orgmode-bounces+larch=yhetil.org@gnu.org" designates 209.51.188.17 as permitted sender) smtp.mailfrom="emacs-orgmode-bounces+larch=yhetil.org@gnu.org" X-Migadu-Spam-Score: -4.47 Authentication-Results: aspmx1.migadu.com; dkim=pass header.d=ucsd.edu header.s=campus header.b=M83YZpUJ; dkim=pass header.d=ucsdhs.onmicrosoft.com header.s=selector2-ucsdhs-onmicrosoft-com header.b=TrTrPoeD; arc=pass ("microsoft.com:s=arcselector9901:i=1"); dmarc=pass (policy=none) header.from=ucsd.edu; spf=pass (aspmx1.migadu.com: domain of "emacs-orgmode-bounces+larch=yhetil.org@gnu.org" designates 209.51.188.17 as permitted sender) smtp.mailfrom="emacs-orgmode-bounces+larch=yhetil.org@gnu.org" X-Migadu-Queue-Id: 846E112808 X-Spam-Score: -4.47 X-Migadu-Scanner: scn1.migadu.com X-TUID: E8tsa3bOAhjE > On Dec 4, 2022, at 6:43 PM, Greg Minshall wrote: >=20 > i see this same behavior. to me, (org-babel-R-assign-elisp) seems to be > the problem, but it hasn't changed any time recently. (nor, if my =3Dgit > blame=3D is done correctly, has anything else in ob-R.el.) >=20 > i don't understand how (org-babel-R-assign-elisp) thinks. it seems to > assign =3Dmax=3D and =3Dmin=3D assuming that =3Dvalue=3D is a list of (at= least one) > list(s). >=20 > this *might* be a fix. but, i don't have a lot of confidence it will > not have bad side effects for other cases. (though i tested it with a > simple list, and a simple table with more than one row, and a list of > two lists, the first of length 3, the second of length 2.): > ---- > modified lisp/ob-R.el > @@ -241,7 +241,7 @@ This function is called by `org-babel-execute-src-blo= ck'." > (defun org-babel-R-assign-elisp (name value colnames-p rownames-p) > "Construct R code assigning the elisp VALUE to a variable named NAME." > (if (listp value) > - (let* ((lengths (mapcar 'length (cl-remove-if-not 'sequencep value= ))) > + (let* ((lengths (mapcar 'length (cl-remove-if-not 'listp value))) > (max (if lengths (apply 'max lengths) 0)) > (min (if lengths (apply 'min lengths) 0))) > ;; Ensure VALUE has an orgtbl structure (depth of at least 2). - (unless (listp (car value)) (setq value (list value))) + (unless (listp (car value)) (setq value (mapcar 'list value))) > ---- This makes a list like '("a" "b" "c") into a data.frame with one column. HTH, Chuck