From mboxrd@z Thu Jan 1 00:00:00 1970 From: David Abernethy Subject: citations not incoprporated from bib file when exporting from .org to pdflatex Date: Tue, 28 Jun 2016 22:51:49 +1200 Message-ID: Mime-Version: 1.0 (Mac OS X Mail 9.3 \(3124\)) Content-Type: multipart/alternative; boundary="Apple-Mail=_7C9AA37C-9D91-41A4-9A39-31D1344F3A6D" Return-path: Received: from eggs.gnu.org ([2001:4830:134:3::10]:60421) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1bHqcY-0004kK-SV for emacs-orgmode@gnu.org; Tue, 28 Jun 2016 06:52:00 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1bHqcU-00043W-LW for emacs-orgmode@gnu.org; Tue, 28 Jun 2016 06:51:57 -0400 Received: from pv36p08im-ztdg07111401.me.com ([17.142.193.35]:50746) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1bHqcU-00043Q-9s for emacs-orgmode@gnu.org; Tue, 28 Jun 2016 06:51:54 -0400 Received: from process-dkim-sign-daemon.pv36p08im-ztdg07111401.me.com by pv36p08im-ztdg07111401.me.com (Oracle Communications Messaging Server 7.0.5.36.0 64bit (built Sep 8 2015)) id <0O9H00I00A2A9T00@pv36p08im-ztdg07111401.me.com> for emacs-orgmode@gnu.org; Tue, 28 Jun 2016 10:51:52 +0000 (GMT) Received: from [192.168.1.40] (202-78-145-155.cable.telstraclear.net [202.78.145.155]) by pv36p08im-ztdg07111401.me.com (Oracle Communications Messaging Server 7.0.5.36.0 64bit (built Sep 8 2015)) with ESMTPSA id <0O9H00C03A6DLX50@pv36p08im-ztdg07111401.me.com> for emacs-orgmode@gnu.org; Tue, 28 Jun 2016 10:51:52 +0000 (GMT) List-Id: "General discussions about Org-mode." List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: emacs-orgmode-bounces+geo-emacs-orgmode=m.gmane.org@gnu.org Sender: "Emacs-orgmode" To: emacs-orgmode@gnu.org --Apple-Mail=_7C9AA37C-9D91-41A4-9A39-31D1344F3A6D Content-Transfer-Encoding: quoted-printable Content-Type: text/plain; charset=utf-8 I am exporting a file stroke.org using the = bibliography file stroke.bib in the same directory The citations are not being incorporated into the pdf file An example from stroke.log: LaTeX Warning: Citation `Drummond:2014aa' on = page 2 undefined on input line 71. The header for stroke.org is: #+LATEX_CLASS: article #+BIBLIOGRAPHY: stroke vancouver option:-d My emacs is from MacPorts GNU Emacs 24.5.1 (x86_64-apple-darwin15.4.0, = NS apple-appkit-1404.46) of 2016-05-01 on teneleven-slave.macports.org = My .emacs file contains (setq org-latex-pdf-process '("latexmk -pdflatex=3D'pdflatex = -interaction nonstopmode' -pdf -bibtex -f %f")) Org-mode version 8.3.4 (8.3.4-93-g0d72c3-elpaplus (I updated it as = suggested here http://orgmode.org/elpa.html = but it made no difference) I=E2=80=99m using TexLive 2016 with fully up to date packages Here is the preamble from stroke.tex (no mention of the .bib file) % Created 2016-06-27 Mon 22:50 \documentclass[12pt]{article} \usepackage[utf8]{inputenc} .. \usepackage{wrapfig} \author{David Abernethy} \date{\today} \title{} \hypersetup{ pdfauthor=3D{David Abernethy}, pdfcreator=3D{Emacs 24.5.1 (Org mode 8.3.4)},..} \begin{document} My set up (Latex header in the .org file and .bib file with the .emacs = entry) used to work for this file but I have probably updated emacs = since. Can anyone see what is wrong? help much appreciated David= --Apple-Mail=_7C9AA37C-9D91-41A4-9A39-31D1344F3A6D Content-Transfer-Encoding: quoted-printable Content-Type: text/html; charset=utf-8
I am exporting a file stroke.org using the = bibliography file stroke.bib in the same directory
The citations are not being incorporated into = the pdf file

An example from = stroke.log: LaTeX Warning: Citation `Drummond:2014aa' on page 2 = undefined on input line 71.

The header for stroke.org is:
#+LATEX_CLASS: article
#+BIBLIOGRAPHY: = stroke vancouver option:-d

My emacs is from MacPorts  GNU = Emacs 24.5.1 (x86_64-apple-darwin15.4.0, NS = apple-appkit-1404.46)
 of 2016-05-01 on teneleven-slave.macports.org

My .emacs file contains
(setq org-latex-pdf-process '("latexmk -pdflatex=3D'pdflatex = -interaction nonstopmode' -pdf -bibtex -f %f"))

Org-mode version 8.3.4 = (8.3.4-93-g0d72c3-elpaplus (I updated it as suggested here http://orgmode.org/elpa.html but it made = no difference)
I=E2=80=99m using TexLive 2016 = with fully up to date packages

Here is the preamble from stroke.tex = (no mention of the .bib file)
% Created 2016-06-27 Mon = 22:50
\documentclass[12pt]{article}
\usepackage[utf8]{inputenc}
..
\usepackage{wrapfig}
\author{David Abernethy}
\date{\today}
\title{}
\hypersetup{
= pdfauthor=3D{David Abernethy},
pdfcreator=3D{Emacs 24.5.1 (Org mode 8.3.4)},..}
\begin{document}

My set up (Latex = header in the .org file and .bib file with the .emacs entry) used to = work for this file but I have probably updated emacs since.
Can anyone see what is wrong?  help much = appreciated

David
= --Apple-Mail=_7C9AA37C-9D91-41A4-9A39-31D1344F3A6D--