From: Christopher Witte <chris@witte.net.au>
To: Org Mode <emacs-orgmode@gnu.org>
Subject: Problem with Babel and sessions
Date: Thu, 9 Sep 2010 17:09:56 +0200 [thread overview]
Message-ID: <AANLkTim32fcEKcLMNV_R6WaUmL=KpojeC8ySaHYyottC@mail.gmail.com> (raw)
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I'm having a bit of trouble with org bable and R. When I try to execute the
code below (C-c C-c on the call line), as you can see, I get the results
:nil
---------------------------------------
#+tblname: tableTestBabel
| 0 | 4.40 |
| 30 | 4.54 |
| 60 | 7.09 |
| 90 | 9.40 |
| 120 | 9.22 |
| 150 | 6.65 |
| 180 | 4.22 |
#+srcname: chartPolAngle(pol)
#+begin_src R
angle <- pol[,1]
energy <- pol[,2]
plot(angle,energy)
energy.model <- nls (energy ~ a1 + a2 * (sin(pi / a3 *(angle-a4)))^2,
start=list(a1=3.0, a2=7.0, a3=180, a4=0.0))
lines(spline(angle, fitted.values(energy.model)), lwd=2)
summary(energy.model)
#+end_src
#+call: chartPolAngle(pol=tableTestBabel) :session testBabel:file
testBabel.pdf
#+results: chartPolAngle(pol=tableTestBabel)
: nil
------------------------------------
but If I move the header arguments to the source block, as in the code
below, everything works fine. I also get asked "ESS [S(R): R] starting data
directory? ~/doc/org/" which I don't get with the code above.
---------------------------------------
#+tblname: tableTestBabel
| 0 | 4.40 |
| 30 | 4.54 |
| 60 | 7.09 |
| 90 | 9.40 |
| 120 | 9.22 |
| 150 | 6.65 |
| 180 | 4.22 |
#+call: chartPolAngle(pol=tableTestBabel)
#+results: chartPolAngle(pol=tableTestBabel)
: testBabel.pdf
#+srcname: chartPolAngle(pol)
#+begin_src R :session testBabel :file testBabel.pdf
angle <- pol[,1]
energy <- pol[,2]
plot(angle,energy)
energy.model <- nls (energy ~ a1 + a2 * (sin(pi / a3 *(angle-a4)))^2,
start=list(a1=3.0, a2=7.0, a3=180, a4=0.0))
lines(spline(angle, fitted.values(energy.model)), lwd=2)
summary(energy.model)
#+end_src
---------------------------------------
Org doesn't appear to respect the head arguments on the call. I pulled from
git a couple days ago. Any ideas why?
Cheers
Chris Witte
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next reply other threads:[~2010-09-09 15:10 UTC|newest]
Thread overview: 7+ messages / expand[flat|nested] mbox.gz Atom feed top
2010-09-09 15:09 Christopher Witte [this message]
2010-09-10 18:06 ` Proposed New Syntax For Calling Code Blocks was: Problem with Babel and sessions Eric Schulte
2010-09-10 19:58 ` Proposed New Syntax For Calling Code Blocks was Jambunathan K
2010-09-10 21:12 ` Jambunathan K
2010-09-13 12:05 ` Proposed New Syntax For Calling Code Blocks was: Problem with Babel and sessions Christopher Witte
2010-09-18 12:24 ` Eric Schulte
2010-09-14 19:03 ` Sébastien Vauban
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