From: Aaron Ecay <aaronecay@gmail.com>
To: Eric Schulte <schulte.eric@gmail.com>,
Andreas Leha <andreas.leha@med.uni-goettingen.de>
Cc: emacs-orgmode@gnu.org
Subject: Re: Bug? R: Org babel block execution *drastically* slower than in ESS session directly
Date: Sat, 17 Nov 2012 20:41:31 -0500 [thread overview]
Message-ID: <87sj87g01g.fsf@gmail.com> (raw)
In-Reply-To: <873907afsd.fsf@gmail.com>
2012ko azaroak 17an, Eric Schulte-ek idatzi zuen:
> Oh!, thanks for catching this, I just pushed up a fix.
This is no longer a (complete) fix for the original problem, though. (A
large part of) the slowdown comes from reading the results from a temp
file and transforming them into an elispy format, which is handled by
the backends. Your code only prevents them from being echoed to the
minibuffer.
You can see this by trying your original “seq” tests. You should see
them taking the same (very long) amount of time.
If you set debug-on-quit to t (before evaluating the block) and
interrupt emacs with C-g when it hangs, you’ll see a backtrace that goes
through ‘org-babel-execute:sh’ and then
‘org-babel-import-elisp-from-file’. The presence of the former in the
call stack is why I claim that per-backend fixes are ultimately needed.
The latter is where my patch addresses the problem in a temporary way.
>
> I may be outvoted, but I find this approach too be overly complicated.
> Also, size may frequently not be the best proxy for the time which
> Emacs will take to ingest the results.
I agree that my patch is a stopgap. But until per-backend fixes are
available, this allows certain code to run that otherwise wouldn’t (at
least not without hacks, such as putting NULL at the end of an R source
block so that the “.Last.value” in the block is trivial).
--
Aaron Ecay
next prev parent reply other threads:[~2012-11-18 1:41 UTC|newest]
Thread overview: 217+ messages / expand[flat|nested] mbox.gz Atom feed top
2012-10-31 6:12 Bug? R: Org babel block execution *drastically* slower than in ESS session directly John Hendy
2012-10-31 16:41 ` cberry
2012-10-31 17:18 ` John Hendy
2012-10-31 20:12 ` cberry
2012-10-31 20:23 ` John Hendy
2012-10-31 20:56 ` Thomas S. Dye
2012-10-31 23:00 ` Nick Dokos
2012-10-31 22:53 ` Nick Dokos
2012-11-01 14:53 ` John Hendy
2012-11-01 15:38 ` Nick Dokos
2012-11-01 18:17 ` John Hendy
2012-11-01 18:18 ` John Hendy
2012-11-01 18:48 ` Nick Dokos
2012-11-14 3:27 ` Aaron Ecay
2012-11-14 4:52 ` John Hendy
2012-11-14 6:32 ` Aaron Ecay
2012-11-14 8:28 ` Thomas S. Dye
2012-11-14 8:35 ` Andreas Leha
2012-11-16 15:45 ` Eric Schulte
2012-11-16 17:47 ` Andreas Leha
2012-11-16 19:00 ` John Hendy
2012-11-16 20:25 ` Achim Gratz
2012-11-17 17:12 ` Eric Schulte
2012-11-18 0:41 ` Aaron Ecay
2012-11-18 0:57 ` Eric Schulte
2012-11-18 1:41 ` Aaron Ecay [this message]
2012-11-19 1:18 ` Eric Schulte
2012-11-19 5:11 ` Eric Schulte
-- strict thread matches above, loose matches on Subject: below --
2013-03-19 21:40 python sessions Gary Oberbrunner
2013-03-20 0:04 ` John Hendy
2013-03-20 3:07 ` Nick Dokos
2013-03-20 6:44 ` Andreas Röhler
2013-03-20 12:54 ` Ista Zahn
2013-03-20 14:08 ` Nick Dokos
2013-03-20 14:28 ` Gary Oberbrunner
2013-03-20 17:21 ` Andreas Röhler
2013-03-20 7:08 ` Andreas Röhler
2013-03-20 15:38 ` John Hendy
2013-03-20 15:42 ` John Hendy
2013-03-20 16:06 ` Nick Dokos
[not found] ` <CAFChFygsUeBejEY6m2bSU0C5cjLYz0nUADH=s+BYxajfZ2sKKQ@mail.gmail.com>
2013-03-20 16:12 ` Fwd: " Gary Oberbrunner
2013-03-20 17:08 ` Andreas Röhler
2013-03-20 17:25 ` Nick Dokos
2013-03-20 17:54 ` John Hendy
2013-03-20 18:15 ` Nick Dokos
2013-03-20 18:32 ` Ista Zahn
2013-03-20 18:39 ` Nick Dokos
2013-03-20 18:43 ` Andreas Röhler
2013-03-20 19:42 ` Ista Zahn
2013-03-20 19:53 ` Andreas Röhler
2013-03-20 20:12 ` Ista Zahn
2013-03-20 20:25 ` Gary Oberbrunner
2013-03-20 22:06 ` Ista Zahn
2013-03-20 18:42 ` Andreas Röhler
2013-03-20 19:01 ` Andreas Röhler
[not found] ` <CAFChFygPrhuHHyMo2Vk2_OdksWVB=oACA7jnOXN+itUNqh-nqw@mail.gmail.com>
[not found] ` <CA+M2ft9bO7DU61vVeYrhduVvkg1V6PMuiyvsOy5tNWuXcSUEpw@mail.gmail.com>
[not found] ` <CAFChFyhbeXE4HNLKA6Ubii+MtQwD7=4khAypa+--coZrQiJekA@mail.gmail.com>
2013-03-21 1:22 ` Gary Oberbrunner
2013-03-21 1:54 ` John Hendy
2013-03-21 1:56 ` Gary Oberbrunner
2013-03-21 7:42 ` Andreas Röhler
2013-03-21 7:43 ` Bastien
2013-03-21 8:13 ` Andreas Röhler
2013-03-23 22:07 ` Eric Schulte
2013-03-24 1:29 ` John Hendy
2013-03-24 22:59 ` Eric Schulte
2013-03-25 2:38 ` Nick Dokos
2013-03-25 2:59 ` John Hendy
2013-03-25 6:34 ` Andreas Röhler
2013-03-25 15:40 ` Eric Schulte
2013-03-25 15:55 ` John Hendy
2013-03-25 16:07 ` Eric Schulte
2013-03-25 16:41 ` Nick Dokos
2013-03-25 16:01 ` Ista Zahn
2013-03-25 16:23 ` John Hendy
2013-03-25 16:43 ` Eric Schulte
2013-03-25 17:27 ` Andreas Röhler
2013-03-25 17:41 ` John Hendy
2013-03-25 18:16 ` Ista Zahn
2013-03-25 19:30 ` Ivan Andrus
2013-03-24 7:47 ` Andreas Röhler
2013-03-24 14:47 ` John Hendy
2013-03-24 15:30 ` Andreas Röhler
2013-03-24 16:58 ` Nick Dokos
2013-03-24 16:59 ` John Hendy
2013-03-24 18:41 ` Nick Dokos
2013-03-25 20:46 ` Andreas Röhler
2013-03-25 21:37 ` Eric Schulte
2013-03-26 6:29 ` Andreas Röhler
2013-03-26 12:32 ` Eric Schulte
2013-03-26 21:41 ` Gary Oberbrunner
2013-03-26 21:47 ` John Hendy
2013-03-27 6:19 ` Andreas Röhler
2013-03-30 7:19 ` Andreas Röhler
2012-08-26 20:11 Alternate format for datetree c b
2012-08-27 1:16 ` John Hendy
2012-08-27 4:04 ` Nick Dokos
2012-08-27 6:08 ` John Hendy
2012-08-28 8:49 ` Ian Barton
2012-08-28 12:49 ` Nick Dokos
2012-08-28 12:50 ` Nick Dokos
2012-08-29 7:49 ` Ian Barton
[not found] ` <lists@manor-farm.org>
2012-08-29 14:17 ` Nick Dokos
2012-08-29 14:25 ` John Hendy
2012-08-29 20:01 ` Ian Barton
2012-09-06 7:46 ` Ian Barton
2012-09-06 5:42 ` c b
2012-09-06 6:26 ` Nick Dokos
2012-09-06 7:00 ` Jambunathan K
2012-09-06 15:33 ` John Hendy
2012-09-06 16:08 ` Jonathan Leech-Pepin
2011-11-02 2:22 Pass LaTeX exporter option prior to \documentclass John Hendy
2011-11-02 2:43 ` suvayu ali
2011-11-02 10:30 ` suvayu ali
2011-11-03 17:48 ` John Hendy
2011-11-03 17:55 ` suvayu ali
2011-11-03 18:07 ` John Hendy
2011-11-04 17:29 ` Nick Dokos
2011-11-04 19:29 ` suvayu ali
2011-10-19 14:54 Prompt for time when clocking in? Nathan Neff
2011-10-19 15:12 ` John Hendy
2011-10-19 15:35 ` Nick Dokos
2011-10-20 16:15 ` Nathan Neff
2011-10-20 17:09 ` Nick Dokos
2011-10-20 17:44 ` Nathan Neff
2011-10-19 16:37 ` Bernt Hansen
2011-08-05 22:15 Handling errors in command line exporting of agenda? John Hendy
2011-08-05 23:34 ` suvayu ali
2011-08-05 23:35 ` suvayu ali
2011-08-08 18:12 ` John Hendy
2011-08-08 18:28 ` suvayu ali
2011-08-08 18:53 ` John Hendy
2011-08-08 18:59 ` suvayu ali
2011-08-08 19:48 ` John Hendy
2011-08-08 20:22 ` suvayu ali
2011-08-08 20:31 ` John Hendy
2011-08-08 20:33 ` Nick Dokos
2011-08-08 20:37 ` Nick Dokos
2011-08-08 20:54 ` John Hendy
2011-08-08 21:09 ` Nick Dokos
2011-08-08 21:27 ` John Hendy
2011-08-08 21:30 ` suvayu ali
2011-08-08 22:17 ` Nick Dokos
2011-08-08 21:46 ` suvayu ali
2011-06-15 10:29 BUG: Newest org-mode interferes with desktop save Rainer M Krug
2011-06-15 16:49 ` Eric Schulte
2011-06-15 17:35 ` Nick Dokos
2011-06-15 18:23 ` Rainer M Krug
2011-06-15 18:21 ` Rainer M Krug
2011-06-15 18:31 ` Eric Schulte
2011-06-15 18:59 ` Rainer M Krug
2011-06-15 22:40 ` Nick Dokos
2011-06-16 7:15 ` Rainer M Krug
2011-06-16 7:29 ` Jambunathan K
2011-06-16 8:22 ` Rainer M Krug
2011-05-24 15:54 Passing font size to exported LaTeX table John Hendy
2011-05-24 16:44 ` Sebastien Vauban
2011-05-24 18:57 ` John Hendy
2011-05-24 19:25 ` Nick Dokos
2011-05-24 19:31 ` John Hendy
2011-05-24 19:58 ` Thomas S. Dye
2011-05-24 20:42 ` Nick Dokos
2011-05-24 21:12 ` Nick Dokos
2011-05-24 21:19 ` Nick Dokos
2011-05-25 7:22 ` Thomas S. Dye
2011-05-27 0:58 ` suvayu ali
2011-05-27 6:46 ` Thomas S. Dye
2011-05-27 7:07 ` suvayu ali
2011-05-27 16:17 ` Thomas S. Dye
2011-05-27 16:50 ` Suvayu Ali
2011-05-27 17:37 ` Thomas S. Dye
2011-05-27 18:30 ` Suvayu Ali
2011-05-27 21:25 ` Thomas S. Dye
2011-05-28 7:17 ` Sebastien Vauban
2011-05-28 10:14 ` Suvayu Ali
2011-05-28 15:21 ` Nick Dokos
2011-05-28 18:10 ` Suvayu Ali
2011-06-01 18:50 ` Nick Dokos
2011-06-01 19:08 ` Suvayu Ali
2011-06-10 22:31 ` Suvayu Ali
2011-06-13 1:38 ` suvayu ali
2011-06-13 1:52 ` Nick Dokos
2011-06-13 2:40 ` Suvayu Ali
2011-06-13 3:29 ` Nick Dokos
2011-06-13 3:45 ` Thomas S. Dye
2011-06-13 4:27 ` Nick Dokos
2011-06-13 4:56 ` Suvayu Ali
2011-06-13 5:29 ` Nick Dokos
2011-06-13 6:42 ` Suvayu Ali
2011-05-24 20:06 ` Nick Dokos
2011-05-24 19:42 ` Sebastien Vauban
2010-08-21 19:30 Gnuplot unevenly spaced non-numeric data plot? John Hendy
2010-08-21 20:35 ` Eric S Fraga
2010-08-21 20:41 ` Nick Dokos
2010-08-21 21:11 ` John Hendy
2010-08-21 22:41 ` John Hendy
2010-08-21 23:17 ` Nick Dokos
2010-08-23 14:22 ` John Hendy
2010-08-23 15:16 ` Nick Dokos
[not found] ` <AANLkTi=WTLBL1Giq0GTrjCo-A1s=iP4u1Qxn57cH-xnB@mail.gmail.com>
[not found] ` <AANLkTimSVm=-2o39CQ9wSMT276Dee4Tuj9jLKJH-c+cd@mail.gmail.com>
2010-08-24 2:44 ` [For Worg?] " John Hendy
2010-08-24 5:25 ` suvayu ali
2010-08-24 5:56 ` Nick Dokos
2010-08-25 0:32 ` Eric Schulte
2010-08-25 1:06 ` John Hendy
2010-08-25 1:35 ` Eric Schulte
2010-08-25 18:38 ` John Hendy
2010-08-25 18:52 ` Eric Schulte
[not found] ` <jw.hendy@gmail.com>
2012-03-12 21:13 ` Beamer specific setupfile? John Hendy
2012-03-12 21:48 ` Nick Dokos
2012-03-12 22:09 ` John Hendy
2012-03-12 22:30 ` Nick Dokos
2012-03-12 22:44 ` Nick Dokos
2012-03-13 5:02 ` John Hendy
2012-03-13 5:46 ` Nick Dokos
2012-04-25 8:16 ` Eric Fraga
2012-04-25 8:59 ` Eric Fraga
2012-03-12 23:01 ` Nick Dokos
2012-03-12 21:51 ` Nick Dokos
2012-03-12 22:05 ` Nick Dokos
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