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From: Nick Dokos <ndokos@gmail.com>
To: emacs-orgmode@gnu.org
Subject: Re: HowTo? have R :sessions in org mode invoke a specific R
Date: Mon, 25 Nov 2013 16:56:50 -0500	[thread overview]
Message-ID: <87r4a49mcd.fsf@alphaville.bos.redhat.com> (raw)
In-Reply-To: D4772401B9D976478C0895769BE3E792C3E4A0@MBSRV02.sgc.loc

"Cook, Malcolm" <MEC@stowers.org> writes:

>>On Mon, Nov 4, 2013 at 11:22 AM, Cook, Malcolm <MEC@stowers.org> wrote:
>  >> I wish to lock an org buffer to a particular installation of R so that all code blocks use it.
>  >>
>  >> I found that I could not, for instance, write `:session R-3.0.1`.
>  >>
>  >> Is there some best way for me to accomplish this?
>  >>
>  >> Perhaps some way of setting inferior-R-program-name to a buffer local value?
>  >
>  >I'm no good at in-buffer variables, but this one looks of interest:
>  >org-babel-R-command
>
> Indeed, John,  that is the variable I would like to have respected when I
>
> (setq-local inferior-R-program-name "R-3.0.1")
>
>
> But, alas it is not.
>
> Any other takers?
>
> Thanks!

I think you got it backwards: if you are trying to use org-babel to
evaluate an R code block, then the variable you should set is
org-babel-R-command as John indicated. Setting inferior-R-program-name
to something does not tell anything to org-babel. To use your term,
org-babel does not respect inferior-R-program-name; the only thing it
knows is org-babel-R-command. Only ESS respects inferior-R-program-name,
but you are not using ESS here. So have you tried

 (setq-local org-babel-R-command "R-3.0.1 --slave --no-save")

in your org-mode buffer where you are evaluating your R code?
The options are guesses based on the current setting. Untested since
I know virtually nothing about R.

Nick

  reply	other threads:[~2013-11-25 21:57 UTC|newest]

Thread overview: 5+ messages / expand[flat|nested]  mbox.gz  Atom feed  top
2013-11-04 17:22 HowTo? have R :sessions in org mode invoke a specific R Cook, Malcolm
2013-11-04 18:02 ` John Hendy
2013-11-25 21:16   ` Cook, Malcolm
2013-11-25 21:56     ` Nick Dokos [this message]
2015-10-16 19:44       ` Cook, Malcolm

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