From mboxrd@z Thu Jan 1 00:00:00 1970 From: Thorsten Jolitz Subject: Re: Folding in iESS R buffer Date: Tue, 27 May 2014 10:21:29 +0200 Message-ID: <87d2ez1vjq.fsf@gmail.com> References: Mime-Version: 1.0 Content-Type: text/plain Return-path: Received: from eggs.gnu.org ([2001:4830:134:3::10]:41594) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WpCdw-000779-1c for emacs-orgmode@gnu.org; Tue, 27 May 2014 04:22:01 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1WpCdq-0002qt-CY for emacs-orgmode@gnu.org; Tue, 27 May 2014 04:21:55 -0400 Received: from plane.gmane.org ([80.91.229.3]:40212) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WpCdq-0002qO-2s for emacs-orgmode@gnu.org; Tue, 27 May 2014 04:21:50 -0400 Received: from list by plane.gmane.org with local (Exim 4.69) (envelope-from ) id 1WpCdo-0004A3-Gr for emacs-orgmode@gnu.org; Tue, 27 May 2014 10:21:48 +0200 Received: from e178190143.adsl.alicedsl.de ([85.178.190.143]) by main.gmane.org with esmtp (Gmexim 0.1 (Debian)) id 1AlnuQ-0007hv-00 for ; Tue, 27 May 2014 10:21:48 +0200 Received: from tjolitz by e178190143.adsl.alicedsl.de with local (Gmexim 0.1 (Debian)) id 1AlnuQ-0007hv-00 for ; Tue, 27 May 2014 10:21:48 +0200 List-Id: "General discussions about Org-mode." List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: emacs-orgmode-bounces+geo-emacs-orgmode=m.gmane.org@gnu.org Sender: emacs-orgmode-bounces+geo-emacs-orgmode=m.gmane.org@gnu.org To: emacs-orgmode@gnu.org Rainer M Krug writes: Hi Rainer, sorry for the late reply, I was offline some time. > I have modified the variable transfer in ob-R.el so that the variable > transfer code is enclosed as can be seen below. > > My idea is that I can fold the R output so that the variable transfer is > collapsed. I understand that I can use one of the org-outside-org minor > modes [1] (presumibly utshine?) - but I can't figure out how. > > My questions are: > > 1) which enclosing should I use to fold the transfer code away? Outshine is like Org, no enclosing, but file structuring with (outcommented) headlines. > 2) which minor mode should I use for this and how can I configure it? I'm not sure if I understand. When you use ob-R.el, you work in Org files with R source blocks, right? When do you want to fold the R output below? When you are in org-mode or when editing source blocks in R-mode? In the former case, Org-mode is in charge and you don't need outshine. In the latter case, you could install outshine as described in the docs and then add outline-minor-mode to the ESS/R mode hook, i.e. ,------------------------------------------------------------------------------- | ;; outline | (when (require 'outline nil t) | (add-hook 'ess-mode-hook 'outline-minor-mode)) ; is that the hook for R-mode? | | ;; outshine | (when (require 'outshine nil t) | (add-hook 'outline-minor-mode-hook 'outshine-hook-function) | (setq outshine-use-speed-commands t)) `------------------------------------------------------------------------------- Outshine headlines are outcommented Org headlines, i.e. ,---------------------------------- | * Beginning org variable transfer `---------------------------------- becomes ,---------- | ## * Beginning org variable transfer `---------- in R-mode. The R output would become an outshine-subtree with the header above, just like in Org-mode, possibly surrounded by other subtrees. > --8<---------------cut here---------------start------------->8--- >> ###################################################################### > ## Beginning org variable transfer > try(detach(.org_variables_), silent=TRUE) > .org_variables_ <- new.env() > assign( 'COLUMNS', read.table("/var/folders/50/wcr5bjwn75q595n6x82gxj280000gn/T/babel-74428N93/R-import-74428U4A", header=TRUE, row.names=1, sep="\t", as.is=TRUE ), envir = .org_variables_ ); lockBinding('COLUMNS', .org_variables_) > assign( 'COLS_TO_EVAL', read.table("/var/folders/50/wcr5bjwn75q595n6x82gxj280000gn/T/babel-74428N93/R-import-74428hCH", header=TRUE, row.names=1, sep="\t", as.is=TRUE ), envir = .org_variables_ ); lockBinding('COLS_TO_EVAL', .org_variables_) > assign( 'ALLSPECIES', read.table("/var/folders/50/wcr5bjwn75q595n6x82gxj280000gn/T/babel-74428N93/R-import-74428uMN", header=TRUE, row.names=1, sep="\t", as.is=TRUE ), envir = .org_variables_ ); lockBinding('ALLSPECIES', .org_variables_) > assign( 'SPECIES', read.table("/var/folders/50/wcr5bjwn75q595n6x82gxj280000gn/T/babel-74428N93/R-import-744287WT", header=TRUE, row.names=1, sep="\t", as.is=TRUE ), envir = .org_variables_ ); lockBinding('SPECIES', .org_variables_) > assign( 'YEARS', read.table("/var/folders/50/wcr5bjwn75q595n6x82gxj280000gn/T/babel-74428N93/R-import-74428IhZ", header=TRUE, row.names=1, sep="\t", as.is=TRUE ), envir = .org_variables_ ); lockBinding('YEARS', .org_variables_) > assign('PRESENT', 2008, envir = .org_variables_); lockBinding('PRESENT', .org_variables_) > assign('MINEFFORT', 3, envir = .org_variables_); lockBinding('MINEFFORT', .org_variables_) > assign('PROPTRAIN', 0.6, envir = .org_variables_); lockBinding('PROPTRAIN', .org_variables_) > assign('RNGSEED', 13, envir = .org_variables_); lockBinding('RNGSEED', .org_variables_) > assign('RNGKIND', "Mersenne-Twister", envir = .org_variables_); lockBinding('RNGKIND', .org_variables_) > assign('RNGNORMALKIND', "Inversion", envir = .org_variables_); lockBinding('RNGNORMALKIND', .org_variables_) > assign('REFGRID', "./refGrid_8km.rds", envir = .org_variables_); lockBinding('REFGRID', .org_variables_) > assign('IFN', "./__BOX__/IFN/DB_IFN/rds/tabplot.rds", envir = .org_variables_); lockBinding('IFN', .org_variables_) > assign('IFNCOUNT', "./__BOX__/IFN/DB_IFN/rdsRasterized/tabplot.count.8km.rds", envir = .org_variables_); lockBinding('IFNCOUNT', .org_variables_) > assign('IFNMEAN', "./__BOX__/IFN/DB_IFN/rdsRasterized/tabplot.mean.8km.rds", envir = .org_variables_); lockBinding('IFNMEAN', .org_variables_) > assign('IFNPRES', "./__BOX__/IFN/DB_IFN/rdsRasterized/tabplot.pres.8km.rds", envir = .org_variables_); lockBinding('IFNPRES', .org_variables_) > assign('IFNSD', "./__BOX__/IFN/DB_IFN/rdsRasterized/tabplot.sd.8km.rds", envir = .org_variables_); lockBinding('IFNSD', .org_variables_) > assign('IFNTABTREE', "./__BOX__/IFN/DB_IFN/rds/tabtree.rds", envir = .org_variables_); lockBinding('IFNTABTREE', .org_variables_) > lockEnvironment(.org_variables_) > attach(.org_variables_) > save(.org_variables_, file='org_variables.RData') > ## end org variable transfer > ###################################################################### > --8<---------------cut here---------------end--------------->8--- > > > Footnotes: > [1] http://orgmode.org/worg/org-tutorials/org-outside-org.html -- cheers, Thorsten