From mboxrd@z Thu Jan 1 00:00:00 1970 From: Eric Schulte Subject: Re: [babel] [bug] bug in R-specific header argument for graphics driver Date: Mon, 19 Mar 2012 10:48:18 -0400 Message-ID: <878viwabpp.fsf@gmx.com> References: <4F66F488.7030403@gmail.com> <87ty1kad5k.fsf@gmx.com> <4F67441B.4050203@gmail.com> Mime-Version: 1.0 Content-Type: text/plain Return-path: Received: from eggs.gnu.org ([208.118.235.92]:58827) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1S9dsu-0005UL-U3 for emacs-orgmode@gnu.org; Mon, 19 Mar 2012 10:48:38 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1S9dsp-0005Cp-MY for emacs-orgmode@gnu.org; Mon, 19 Mar 2012 10:48:32 -0400 Received: from mailout-us.gmx.com ([74.208.5.67]:33211) by eggs.gnu.org with smtp (Exim 4.71) (envelope-from ) id 1S9dsp-0005Cf-Fs for emacs-orgmode@gnu.org; Mon, 19 Mar 2012 10:48:27 -0400 In-Reply-To: <4F67441B.4050203@gmail.com> (Rainer M. Krug's message of "Mon, 19 Mar 2012 15:35:07 +0100") List-Id: "General discussions about Org-mode." List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: emacs-orgmode-bounces+geo-emacs-orgmode=m.gmane.org@gnu.org Sender: emacs-orgmode-bounces+geo-emacs-orgmode=m.gmane.org@gnu.org To: R.M.Krug@gmail.com Cc: emacs-orgmode Rainer M Krug writes: > On 19/03/12 15:17, Eric Schulte wrote: >> Hi Rainer, >> >> I see you CC'd me on this email. I personally do not know anything about how the graphics >> header argument to R code blocks works. > > Sorry - I thought it was part of babel, and when I hear "babel", I think "eric knows it"... > It is part of Babel, but Dan Davison is the author of much of the R code, and in general there are increasingly language-specific authors who know more about support particular to a specific language than do I. > > >> I would recommend looking deeper into the behavior using the following tools >> >> - Look at the expanded code block body using org-babel-expand-src-block - Run the code block in >> a session, and then look into the session buffer to see what R code is being generated by >> Babel, then try to debug the R as you would normally - look into the temporary R scripts >> generated during execution, which will live in a directory with a name like /tmp/babel-XXXXXX > > Good idea - I'll look into it and give you feedback. > Great, Thanks, > >> >> If you are able to isolate a bug in Babel then I can help fix that bug in the elisp code. > > Thanks - I still haven't managed to get into (e)lisp... > >> >> Thanks and sorry I can't be of more immediate, > > No problem, > > Cheers, > > Rainer > >> >> Rainer M Krug writes: >> >>> I did not get any response so far, so I hope that the email did not went out... >>> >>> Rainer >>> >>> >> When giving the header argument :title: the graph is not produced in a file: >> >> * This works Display boxplot of spread of Mff over time for each release strategy :PROPERTIES: >> :results: graphics :file: SpreadOverTime.pdf :width: 4 :height: 8 :pointsize: 8 :END: >> #+begin_src R plot(runif(100)) #+end_src >> >> * This doesn't Display boxplot of spread of Mff over time for each release strategy >> :PROPERTIES: :results: graphics :file: test.pdf :width: 4 :height: 8 :pointsize: 8 :title: >> "test" :END: #+begin_src R plot(runif(100)) #+end_src >> >> Error message: >> >> Error in pdf(file = "test.pdf", width = 4, height = 8, pointsize = 8, : object 'test' not >> found Calls: -> -> pdf Execution halted >> >> Cheers, >> >> Rainer >> >> -- Eric Schulte http://cs.unm.edu/~eschulte/