emacs-orgmode@gnu.org archives
 help / color / mirror / code / Atom feed
From: Jeremie Juste <jeremiejuste@gmail.com>
To: emacs-orgmode <emacs-orgmode@gnu.org>
Subject: org-babel strange html print in R
Date: Thu, 06 Feb 2020 19:23:36 +0100	[thread overview]
Message-ID: <875zgjh8wn.fsf@gmail.com> (raw)


Hello,

I've found that some strange results when outputing html from R.
Do you have some insights on a potential solution?

Best regards,
Jeremie

Org mode version 9.3.4 (9.3.4-elpa @ /home/djj/.emacs.d/elpa/org-20200206/)

#+PROPERTY: header-args:R  :eval yes  :exports results :colnames yes :results output :output-dir images/    :cache yes  :session *R* 

#+begin_src R :results output html
library(xtable)
x <- rnorm(100)
y <- x + rnorm(100)
print(xtable(summary(lm(y ~ x))),type="html")
#+end_src


#+RESULTS:
#+begin_export html

<!-- html table generated in R 3.6.1 by xtable 1.8-4 package -->
<!-- Thu Feb  6 19:13:34 2020 -->
<table border=1>
<
<
 </
<
Estimate </
<
Std. Error </
<
t value </
<
Pr(&gt;|t|) </
 </tr>
  <
<td align="right"
(Intercept) </
<td align="right"
-0.0130 </
<td align="right"
0.1023 </
<td align="right"
-0.13 </
<td align="right"
0.8991 </
</tr>
  <
<td align="right"
x </
<td align="right"
1.0011 </
<td align="right"
0.0987 </
<td align="right"
10.14 </
<td align="right"
0.0000 </
</tr>
   </table>
#+end_export


** Expected results
#+begin_export html
<table border=1>
<tr> <th>  </th> <th> Estimate </th> <th> Std. Error </th> <th> t value </th> <th> Pr(&gt;|t|) </th>  </tr>
  <tr> <td align="right"> (Intercept) </td> <td align="right"> -0.0130 </td> <td align="right"> 0.1023 </td> <td align="right"> -0.13 </td> <td align="right"> 0.8991 </td> </tr>
  <tr> <td align="right"> x </td> <td align="right"> 1.0011 </td> <td align="right"> 0.0987 </td> <td align="right"> 10.14 </td> <td align="right"> 0.0000 </td> </tr>
   </table>
#+end_export

             reply	other threads:[~2020-02-06 18:23 UTC|newest]

Thread overview: 13+ messages / expand[flat|nested]  mbox.gz  Atom feed  top
2020-02-06 18:23 Jeremie Juste [this message]
2020-02-07 12:53 ` Dominique Dumont
2020-02-07 13:38   ` Bastien
2020-02-07 15:23     ` Dominique Dumont
2020-02-07 14:51   ` Jack Kamm
2020-02-07 23:54     ` Jeremie Juste
2020-02-08  1:30       ` Jack Kamm
2020-02-08  8:42         ` Jeremie Juste
2020-02-11  5:16 ` stardiviner
2020-02-11 15:40   ` Jack Kamm
2020-02-11 17:30     ` Jeremie Juste
2020-02-11 23:25       ` Jack Kamm
2020-02-12  7:05       ` stardiviner

Reply instructions:

You may reply publicly to this message via plain-text email
using any one of the following methods:

* Save the following mbox file, import it into your mail client,
  and reply-to-all from there: mbox

  Avoid top-posting and favor interleaved quoting:
  https://en.wikipedia.org/wiki/Posting_style#Interleaved_style

  List information: https://www.orgmode.org/

* Reply using the --to, --cc, and --in-reply-to
  switches of git-send-email(1):

  git send-email \
    --in-reply-to=875zgjh8wn.fsf@gmail.com \
    --to=jeremiejuste@gmail.com \
    --cc=emacs-orgmode@gnu.org \
    --subject='Re: org-babel strange html print in R' \
    /path/to/YOUR_REPLY

  https://kernel.org/pub/software/scm/git/docs/git-send-email.html

* If your mail client supports setting the In-Reply-To header
  via mailto: links, try the mailto: link

Code repositories for project(s) associated with this inbox:

	https://git.savannah.gnu.org/cgit/emacs/org-mode.git

This is a public inbox, see mirroring instructions
for how to clone and mirror all data and code used for this inbox;
as well as URLs for NNTP newsgroup(s).