From: Darlan Cavalcante Moreira <darcamo@gmail.com>
To: Khoroshyy Petro <khoroshyy@gmail.com>
Cc: org-mode mailing list <emacs-orgmode@gnu.org>
Subject: Re: export image generated by python code.
Date: Mon, 30 Apr 2012 12:14:12 -0300 [thread overview]
Message-ID: <4f9eac49.8a1b340a.7045.ffff8af9@mx.google.com> (raw)
In-Reply-To: <CAEoO5zre9Ms_7Vit-J_HGP4so-awCG1gGCBwKxbohfox8wEmzg@mail.gmail.com>
Remember that when you execute the code via "C-c C-c" it is run in a
temporary file which is not in the same folder as the org file from where
it was generated from. Maybe you are reading some data from a file and
Python is not able to locate the file when run with "C-c C-c".
Put ":results output" in the header and then print the current working
directory to see what I mean. If this is the problem, use the full path to
load any data you need in the python code. Remember you can use variables
in org-babel to pass this path to python, such as ":var
datapath="some_path_or_lisp_function_to_get_the_path" in the babel header..
--
Darlan
At Mon, 30 Apr 2012 15:54:34 +0200,
Khoroshyy Petro <khoroshyy@gmail.com> wrote:
>
> Hi all.
> After some struggle, I can see inline pictures in my org file.
> The problem was python execution. If I execure the code in python-mode
> shell, it generates a picture.
> I the code executed via C-c C-c, the output picture file is empty.
> I still do not know how to solve it.
>
> And I have encountered another problem. The 'result' image is not
> exported, even if I add play with :export option.
>
> Any recommendations how to solve those?
> Thanks
> Petro
> #+BEGIN_SRC python :file estimated_spectra_cl.png
> import pylab
> from scipy import optimize
> import numpy as np
> import pylab as plt
> .....
> plt.figure()
> plt.plot(spectra[:,0],spectra[:,1:])
> plt.grid(1)
> # plt.show()
> plt.savefig("estimated_spectra_cl.png",dpi=100)
> #+END_SRC
>
> #+RESULTS:
> [[file:estimated_spectra_cl.png]]
>
next prev parent reply other threads:[~2012-04-30 15:14 UTC|newest]
Thread overview: 3+ messages / expand[flat|nested] mbox.gz Atom feed top
2012-04-30 13:54 export image generated by python code Khoroshyy Petro
2012-04-30 15:14 ` Darlan Cavalcante Moreira [this message]
2012-05-02 19:10 ` Khoroshyy Petro
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