* [babwel] Simplify graph generation and copying?
@ 2012-03-29 12:41 Rainer M Krug
2012-03-30 19:04 ` Andreas Leha
0 siblings, 1 reply; 3+ messages in thread
From: Rainer M Krug @ 2012-03-29 12:41 UTC (permalink / raw)
To: emacs-orgmode
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1
Hi
I do the following to create a graph in R and then convert / copy / do other stuff with it in the
bash shell:
#+header: :results graphics
#+header: :file Test.pdf
#+header: :width 4
#+header: :height 8
#+header: :pointsize 8
#+begin_src R
plot(runif(100))
#+end_src
#+BEGIN_SRC sh :session shell
cp Test.pdf Test2.pdf
#+END_SRC
Is there a way of automatically giving the ffile name from the :file parameter tio the second code
block, so that I just have to change the :file argument when I want a different name for the graph?
Thanks,
Rainer
- --
Rainer M. Krug, PhD (Conservation Ecology, SUN), MSc (Conservation Biology, UCT), Dipl. Phys.
(Germany)
Centre of Excellence for Invasion Biology
Stellenbosch University
South Africa
Tel : +33 - (0)9 53 10 27 44
Cell: +33 - (0)6 85 62 59 98
Fax : +33 - (0)9 58 10 27 44
Fax (D): +49 - (0)3 21 21 25 22 44
email: Rainer@krugs.de
Skype: RMkrug
-----BEGIN PGP SIGNATURE-----
Version: GnuPG v1.4.11 (GNU/Linux)
Comment: Using GnuPG with Mozilla - http://enigmail.mozdev.org/
iEYEARECAAYFAk90WGcACgkQoYgNqgF2egqQcgCeNjwtNwyppKYVH5dDa2JNyPl9
8TIAn2AJpWD+qjNkAFsuw+NPsFwqZCvI
=nRxk
-----END PGP SIGNATURE-----
^ permalink raw reply [flat|nested] 3+ messages in thread
* Re: [babwel] Simplify graph generation and copying?
2012-03-29 12:41 [babwel] Simplify graph generation and copying? Rainer M Krug
@ 2012-03-30 19:04 ` Andreas Leha
2012-03-31 13:34 ` Rainer M Krug
0 siblings, 1 reply; 3+ messages in thread
From: Andreas Leha @ 2012-03-30 19:04 UTC (permalink / raw)
To: emacs-orgmode
Rainer M Krug <r.m.krug@gmail.com> writes:
> Hi
>
> I do the following to create a graph in R and then convert / copy / do other stuff with it in the
> bash shell:
>
> #+header: :results graphics
> #+header: :file Test.pdf
> #+header: :width 4
> #+header: :height 8
> #+header: :pointsize 8
> #+begin_src R
> plot(runif(100))
> #+end_src
>
> #+BEGIN_SRC sh :session shell
> cp Test.pdf Test2.pdf
> #+END_SRC
>
>
> Is there a way of automatically giving the ffile name from the :file parameter tio the second code
> block, so that I just have to change the :file argument when I want a different name for the graph?
>
> Thanks,
>
> Rainer
Hi Rainer,
I am not aware of any possibility to pass the :file parameter from one
code block to another. But for your use case, the file name is also
the return value of the R code block. So, you can do:
#+name: mypdfplot
#+header: :results graphics
#+header: :file Test.pdf
#+header: :width 4
#+header: :height 8
#+header: :pointsize 8
#+begin_src R
plot(runif(100))
#+end_src
#+BEGIN_SRC sh :session shell :var mypdf=mypdfplot()
cp "$mypdf" Test2.pdf
#+END_SRC
Best,
Andreas
^ permalink raw reply [flat|nested] 3+ messages in thread
* Re: [babwel] Simplify graph generation and copying?
2012-03-30 19:04 ` Andreas Leha
@ 2012-03-31 13:34 ` Rainer M Krug
0 siblings, 0 replies; 3+ messages in thread
From: Rainer M Krug @ 2012-03-31 13:34 UTC (permalink / raw)
To: Andreas Leha; +Cc: emacs-orgmode
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1
On 30/03/12 21:04, Andreas Leha wrote:
> Rainer M Krug <r.m.krug@gmail.com> writes:
>
>> Hi
>>
>> I do the following to create a graph in R and then convert / copy / do other stuff with it in
>> the bash shell:
>>
>> #+header: :results graphics #+header: :file Test.pdf #+header: :width 4 #+header: :height 8
>> #+header: :pointsize 8 #+begin_src R plot(runif(100)) #+end_src
>>
>> #+BEGIN_SRC sh :session shell cp Test.pdf Test2.pdf #+END_SRC
>>
>>
>> Is there a way of automatically giving the ffile name from the :file parameter tio the second
>> code block, so that I just have to change the :file argument when I want a different name for
>> the graph?
>>
>> Thanks,
>>
>> Rainer
>
>
> Hi Rainer,
>
> I am not aware of any possibility to pass the :file parameter from one code block to another.
> But for your use case, the file name is also the return value of the R code block. So, you can
> do:
Looks absolutely perfect. Thanks a lot,
Rainer
>
> #+name: mypdfplot #+header: :results graphics #+header: :file Test.pdf #+header: :width 4
> #+header: :height 8 #+header: :pointsize 8 #+begin_src R plot(runif(100)) #+end_src
>
>
> #+BEGIN_SRC sh :session shell :var mypdf=mypdfplot() cp "$mypdf" Test2.pdf #+END_SRC
>
> Best, Andreas
>
>
- --
Rainer M. Krug, PhD (Conservation Ecology, SUN), MSc (Conservation Biology, UCT), Dipl. Phys.
(Germany)
Centre of Excellence for Invasion Biology
Stellenbosch University
South Africa
Tel : +33 - (0)9 53 10 27 44
Cell: +33 - (0)6 85 62 59 98
Fax : +33 - (0)9 58 10 27 44
Fax (D): +49 - (0)3 21 21 25 22 44
email: Rainer@krugs.de
Skype: RMkrug
-----BEGIN PGP SIGNATURE-----
Version: GnuPG v1.4.11 (GNU/Linux)
Comment: Using GnuPG with Mozilla - http://enigmail.mozdev.org/
iEYEARECAAYFAk93B/gACgkQoYgNqgF2egrQXACeIJpeUNeTCa9amYfs8YI1Nv4F
USkAn0xY0CnVHIqALy+h7rpuE19Mhjcz
=wQVz
-----END PGP SIGNATURE-----
^ permalink raw reply [flat|nested] 3+ messages in thread
end of thread, other threads:[~2012-03-31 13:35 UTC | newest]
Thread overview: 3+ messages (download: mbox.gz / follow: Atom feed)
-- links below jump to the message on this page --
2012-03-29 12:41 [babwel] Simplify graph generation and copying? Rainer M Krug
2012-03-30 19:04 ` Andreas Leha
2012-03-31 13:34 ` Rainer M Krug
Code repositories for project(s) associated with this public inbox
https://git.savannah.gnu.org/cgit/emacs/org-mode.git
This is a public inbox, see mirroring instructions
for how to clone and mirror all data and code used for this inbox;
as well as URLs for read-only IMAP folder(s) and NNTP newsgroup(s).