From: "Doyley, Marvin M." <m.doyley@rochester.edu>
To: John Kitchin <jkitchin@andrew.cmu.edu>
Cc: "emacs-orgmode@gnu.org" <emacs-orgmode@gnu.org>,
"Doyley, Marvin M." <m.doyley@rochester.edu>
Subject: Re: Using org-ref to automatically download articles from Pubmed that satisfies a given search term
Date: Mon, 8 Jan 2018 22:52:32 +0000 [thread overview]
Message-ID: <34208F18-F727-4EC7-A657-62A96AE87FD0@ur.rochester.edu> (raw)
In-Reply-To: <CAJ51ETpGukPk0Hw9-4SzDmzbk85L=L5_8cBFhU-bWqoDbgHQ7Q@mail.gmail.com>
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Thanks John,
I really appreciate this.
Cheers,
M
> On Jan 8, 2018, at 5:37 PM, John Kitchin <jkitchin@andrew.cmu.edu> wrote:
>
> There is a command in org-ref-pubmed that will download a bibtex entry from a pmid: pubmed-insert-bibtex-from-pmid. There is also the commands: pubmed-simple-search which will prompt for a query and open the search in pubmed, the command "pubmed" which just opens the pubmed site, and "pubmed-advanced" which opens the advances search page.
>
> There isn't however, anything as sophisticated as you want for pubmed. You would have to use it to get the DOIs, and then use the doi-add-bibtex-entry function to get the bibtex entry and (if it knows how) the pdf.
>
> John
>
> -----------------------------------
> Professor John Kitchin
> Doherty Hall A207F
> Department of Chemical Engineering
> Carnegie Mellon University
> Pittsburgh, PA 15213
> 412-268-7803
> @johnkitchin
> http://kitchingroup.cheme.cmu.edu <https://urldefense.proofpoint.com/v2/url?u=http-3A__kitchingroup.cheme.cmu.edu&d=DwMFaQ&c=kbmfwr1Yojg42sGEpaQh5ofMHBeTl9EI2eaqQZhHbOU&r=s3_3riAscdqtNAzgOuwYB9g0dZVGcp8BNCy_RylYdxU&m=H6YoFReSxOsGNCWFjFOb7BY7fkgnr_5tlTfCQEW7ck8&s=xak0y049_VKcjFA7_x91GoPfe7gxb85PFs6tKYiZrfI&e=>
>
>
> On Mon, Jan 8, 2018 at 3:32 PM, Doyley, Marvin M. <m.doyley@rochester.edu <mailto:m.doyley@rochester.edu>> wrote:
> Hi there,
>
> I am in the process of writing a broad literature review and was wondering if there is a way to get org-ref to search Pubmed and automatically pull (pdf, abstracts, etc) all the papers that satisfy a given search terms (year range, keyword, authors) ?
>
> Thanks,
>
> M
>
>
>
>
>
>
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next prev parent reply other threads:[~2018-01-08 22:52 UTC|newest]
Thread overview: 7+ messages / expand[flat|nested] mbox.gz Atom feed top
2018-01-08 20:32 Using org-ref to automatically download articles from Pubmed that satisfies a given search term Doyley, Marvin M.
2018-01-08 22:37 ` John Kitchin
2018-01-08 22:52 ` Doyley, Marvin M. [this message]
2018-01-09 3:11 ` John Kitchin
2018-01-09 14:40 ` Doyley, Marvin M.
2018-01-09 17:13 ` John Kitchin
2018-01-09 19:50 ` myglc2
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