Hello org friends.
I've recently upgraded to emacs 29 w/ native-comp support. I'm
consistently getting this error when I load emacs.org and it stops
parsing my document, which is a bit painful. Hopefully this bug report
helps.
My full emacs.org: https://gist.github.com/justinabrahms/7fc5bfcc292ca6fba7d10ec2958bae57
Error I see in *Warnings*:
Warning (org-element-cache): org-element--cache: (ivy-alt-done) Cached element is incorrect in emacs.org. (Cache tic up to date: "yes") Resetting.
If this warning appears regularly, please report the warning text to Org mode mailing list (M-x org-submit-bug-report).
The element is: "(src-block (:language \"emacs-lisp\" :switches nil :parameters \":tangle ~/.emacs.d/static-blog.el\" :begin 118850 :end 127953 :number-lines nil :preserve-indent nil :retain-labels t :use-labels t :label-fmt nil :value \"(package-initialize)
(require 'org-static-blog)
....
It's 700 lines long. I've posted the rest of it here: https://gist.github.com/justinabrahms/69ddd2a958d86cfad027e487c275bd25
Hope this helps,
-justin
Emacs : GNU Emacs 29.0.50 (build 1, x86_64-apple-darwin21.5.0, NS appkit-2113.50 Version 12.4 (Build 21F79))
of 2022-06-10
Package: Org mode version 9.5.4 (9.5.4-ga8b322 @ /Users/jabrahms/.emacs.d/straight/build/org/)
current state:
==============
(setq
org-ref-bibtex-pdf-download-dir nil
org-link-elisp-confirm-function 'yes-or-no-p
org-directory "/Users/jabrahms/docs/"
org-cite-insert-processor 'citar
org-after-todo-state-change-hook '((lambda nil
(if (string= org-state "TODO")
(progn
(save-excursion (org-back-to-heading) (org-expiry-insert-created)))
)
)
)
org-after-refile-insert-hook '(my/org-set-last-refile-link)
org-static-blog-publish-url "https://justin.abrah.ms/"
org-roam-db-gc-threshold 100000000
org-ref-cite-onclick-function #[257 "\300 \207" [org-ref-citation-hydra/body] 2 "\n\n(fn _)"]
org-hide-emphasis-markers t
org-bibtex-headline-format-function #[257 "\300\236A\207" [:title] 3 "\n\n(fn ENTRY)"]
org-ref-insert-cite-function 'org-ref-insert-cite-link
org-log-done 'note
org-roam-mode-hook '(org-roam-bibtex)
org-roam-dailies-capture-templates '(("d" "Journal" entry "* %?" :if-new
(file+head+olp "%<%Y-%m-%d>.org"
"#+title: %<%Y-%m-%d>\n[[id:81A8F7B2-5E27-4469-9473-97AAF9BFA104][journal]]\n"
("Journal"))
)
)
org-agenda-custom-commands '(("d" "Daily agenda and all TODOs"
((tags "PRIORITY=\"A\""
((org-agenda-skip-function '(org-agenda-skip-entry-if 'todo 'done))
(org-agenda-overriding-header "High-priority unfinished tasks:"))
)
(alltodo ""
((org-agenda-skip-function
'(or (abrahms-org-skip-subtree-if-priority 65)
(org-agenda-skip-entry-if 'todo '("WAITING"))
(org-agenda-skip-if nil '(scheduled deadline)))
)
(org-agenda-overriding-header "ALL normal priority tasks:"))
)
(agenda "")
(alltodo ""
((org-agenda-skip-function '(org-agenda-skip-entry-if 'todo '("TODO")))
(org-agenda-overriding-header "Things I'm waiting on:"))
)
)
((org-agenda-compact-blocks nil)))
)
org-startup-folded 'content
org-babel-after-execute-hook '(org-display-inline-images)
org-agenda-files '("there are many here that are private")
org-publish-project-alist '(("blog" :components
("blog-content" "blog-static" "blog-webmaster-tools" "blog-newsletter"))
("blog-newsletter" :base-directory "~/src/justin.abrah.ms/blog/newsletter/"
:publishing-directory
"/ssh:justin@justin.abrah.ms:/srv/justin.abrah.ms/newsletter/"
:base-extension "org" :publishing-function org-html-publish-to-html :author
nil :with-toc nil :creator-info nil :html-postamble nil :html-preamble
stats-tracking-code :timestamp nil :creator nil)
("blog-webmaster-tools" :base-directory "~/src/justin.abrah.ms/blog/"
:publishing-directory "/ssh:justin@justin.abrah.ms:/srv/justin.abrah.ms/"
:base-extension "html" :publishing-function
org-publish-attachment-and-make-readable :author nil :with-toc nil
:creator-info nil :html-postamble nil :html-preamble nil :timestamp nil
:creator nil)
("blog-pastes" :base-directory "~/src/justin.abrah.ms/blog/pastes/"
:publishing-directory
"/ssh:justin@justin.abrah.ms:/srv/justin.abrah.ms/pastes/" :base-extension
"html" :publishing-function org-publish-attachment-and-make-readable
:author nil :with-toc nil :creator-info nil :html-postamble nil
:html-preamble nil :timestamp nil :creator nil)
("blog-content" :base-directory "~/src/justin.abrah.ms/blog/"
:base-extension "org" :publishing-directory
"/ssh:justin@justin.abrah.ms:/srv/justin.abrah.ms/" :recursive t
:publishing-function org-html-publish-to-html :export-with-tags nil
:headline-levels 4 :with-toc nil :section-numbers nil :sub-superscript nil
:todo-keywords nil :author nil :creator-info nil :html-preamble
(lambda (_)
(concat (stats-tracking-code "")
"\n\n")
)
:html-postamble
"\n\n\n
"
:timestamp t :exclude-tags ("noexport" "todo") :auto-preamble f)
("blog-static" :base-directory "~/src/justin.abrah.ms/blog/static/"
:base-extension "css\\|js\\|png\\|jpg\\|gif\\|pdf\\|mp3\\|ogg\\|swf\\|otf"
:publishing-directory
"/ssh:justin@justin.abrah.ms:/srv/justin.abrah.ms/static/" :recursive t
:publishing-function org-publish-attachment-and-make-readable)
("literate-config" :publishing-directory
"/ssh:justin@justin.abrah.ms:/srv/justin.abrah.ms/" :base-directory
"~/src/justin.abrah.ms/blog/" :exclude ".*" :include ("dotfiles/emacs.org")
:publishing-directory "/tmp/" :publishing-function org-html-publish-to-html)
)
org-capture-templates '(("t" "Todo" entry (file "/Users/jabrahms/docs/captured.org") "**** TODO %?\n%a")
("m" "Meeting" entry (file "/Users/jabrahms/docs/captured.org") "**** %?\n%t")
("i" "Item" entry (file "/Users/jabrahms/docs/captured.org") "**** %?\n%a")
("a" "Action item" entry (file "/Users/jabrahms/docs/captured.org")
"* WAITING %?\n:PROPERTIES:\n:WAITING_ON: %^{Who owns this?}\n:END:\n %i %U %a")
("p" "Perf Note" entry (file "/Users/jabrahms/docs/captured.org")
"* %? :perf:\n\n %i %U")
("c" "org-capture selected" entry (file "/Users/jabrahms/docs/captured.org")
"* [[%:link][%:description]]\n #+BEGIN_QUOTE\n%i\n#+END_QUOTE\n\n\n%?")
("C" "org-capture unselected" entry (file "/Users/jabrahms/docs/captured.org")
"* %? [[%:link][%:description]] \nCaptured On: %U")
)
org-persist-after-read-hook '(org-element--cache-persist-after-read)
org-refile-targets '((nil :maxlevel . 9) (org-agenda-files :maxlevel . 9))
org-static-blog-posts-directory "~/src/justin.abrah.ms/blog/_posts"
org-export-before-parsing-hook '(org-attach-expand-links)
org-cycle-tab-first-hook '(org-babel-hide-result-toggle-maybe org-babel-header-arg-expand)
org-static-blog-page-header "\n\n\n\n\n\n\n"
org-default-notes-file "/Users/jabrahms/docs//captured.org"
org-roam-find-file-hook '(org-roam-buffer--setup-redisplay-h org-roam--register-completion-functions-h
org-roam--replace-roam-links-on-save-h
org-roam-db-autosync--setup-update-on-save-h)
org-refile-use-outline-path t
org-ref-bibtex-assoc-pdf-with-entry-move-function 'rename-file
org-archive-hook '(org-attach-archive-delete-maybe)
org-cite-follow-processor 'citar
org-odt-format-inlinetask-function 'org-odt-format-inlinetask-default-function
org-ascii-format-drawer-function #[771 "\207" [] 4 "\n\n(fn NAME CONTENTS WIDTH)"]
org-cycle-hook '(org-cycle-hide-archived-subtrees org-cycle-show-empty-lines
org-cycle-optimize-window-after-visibility-change)
org-static-blog-enable-tags t
org-static-blog-archive-file "index.html"
org-static-blog-page-preamble "\n\n"
org-persist-before-read-hook '(org-element--cache-persist-before-read)
org-font-lock-set-keywords-hook '(doom-themes-enable-org-fontification)
org-modules nil
org-ref-notes-function 'orb-edit-notes
org-image-actual-width '(550)
org-mode-hook '(elpher-org-mode-integration emojify-mode
#[0 "\301\211\207" [imenu-create-index-function org-imenu-get-tree] 2]
org-fragtog-mode turn-on-org-cdlatex org-ref-org-menu org-variable-pitch-minor-mode
org-variable-pitch--enable org-appear-mode org-superstar-mode org-eldoc-load
#[0 "\300\301\302\303\304$\207"
[add-hook change-major-mode-hook org-fold-show-all append local] 5]
#[0 "\300\301\302\303\304$\207"
[add-hook change-major-mode-hook org-babel-show-result-all append local] 5]
org-babel-result-hide-spec org-babel-hide-all-hashes abrahms/org-mode-setup)
org-babel-load-languages '((plantuml . t))
org-ref-insert-link-function 'org-ref-insert-link
org-link-file-path-type 'relative
org-roam-ref-annotation-function 'org-roam-ref-read--annotation
org-roam-directory "/Users/jabrahms/docs/roam/"
org-latex-format-drawer-function #[514 "\207" [] 3 "\n\n(fn _ CONTENTS)"]
org-ellipsis " ▾"
org-roam-db-node-include-function #[0 "\300\207" [t] 1]
org-latex-format-headline-function 'org-latex-format-headline-default-function
org-confirm-shell-link-function 'yes-or-no-p
org-export-with-section-numbers nil
org-html-format-drawer-function #[514 "\207" [] 3 "\n\n(fn NAME CONTENTS)"]
outline-isearch-open-invisible-function 'outline-isearch-open-invisible
org-super-agenda-mode t
org-plantuml-jar-path "/Users/jabrahms/plantuml-1.2021.15.jar"
org-odt-format-headline-function 'org-odt-format-headline-default-function
org-protocol-protocol-alist '(("org-roam-node" :protocol "roam-node" :function
org-roam-protocol-open-node)
("org-roam-ref" :protocol "roam-ref" :function org-roam-protocol-open-ref))
org-roam-capture-preface-hook '(org-roam-dailies--override-capture-time-h
org-roam-capture--try-capture-to-ref-h)
org-agenda-before-write-hook '(org-agenda-add-entry-text)
org-capture-prepare-finalize-hook '(org-roam-capture--install-finalize-h)
org-src-preserve-indentation t
org-roam-preview-function 'org-roam-preview-default-function
org-babel-tangle-lang-exts '(("asymptote" . "asy") ("python" . "py") ("emacs-lisp" . "el")
("elisp" . "el"))
org-static-blog-page-postamble " "
org-src-mode-hook '(doom-modeline-set-org-src-modeline org-src-babel-configure-edit-buffer
org-src-mode-configure-edit-buffer)
org-roam-db-autosync-mode t
org-html-htmlize-output-type 'css
org-confirm-elisp-link-function 'yes-or-no-p
org-noter-separate-notes-from-heading t
org-superstar-headline-bullets-list '("◉" "○" "●" "○" "●" "○" "●")
org-log-buffer-setup-hook '(org-roam-log--setup)
org-cite-activate-processor 'citar
org-todo-keywords '((sequence "TODO" "NEXT" "WAITING" "BLOCKED" "DONE"))
org-ref-clean-bibtex-entry-hook '(org-ref-bibtex-format-url-if-doi orcb-key-comma
org-ref-replace-nonascii orcb-& orcb-% org-ref-title-case-article
orcb-clean-year orcb-key orcb-clean-doi orcb-clean-pages
orcb-check-journal org-ref-sort-bibtex-entry orcb-fix-spacing
orcb-download-pdf)
org-roam-capture-new-node-hook '(org-roam-capture--insert-captured-ref-h)
org-static-blog-publish-directory "/srv/justin.abrah.ms"
org-html-head-extra "\n\n\n\n\n\n\n\n\n