Hi,

Not uncommonly I will clock into a task that takes very little time, so that 0 minutes is logged against it, before logging in to the next task.

When I run agenda mode with show-clocking errors, it will mark these two tasks as a clocking overlap, when in fact this was not the case.

Currently to resolve this, every week I have to cull all clocking entries that are for 0 minutes.

I feel better behaviour would be, in this situation to not trigger the clocking overlap.

Thanks very much for reviewing this, and for org mode in general. This is a life changing software for me.

Regards,

- Eddie Drury

------------------------------------------------------------------------

Emacs : GNU Emacs 26.3 (build 2, x86_64-pc-linux-gnu, GTK+ Version 3.24.14)
of 2020-03-26, modified by Debian
Package: Org mode version 9.5 (nil @ /home/eddie/.emacs.d/.local/straight/build-26.3/org-mode/)

current state:
==============
(setq
org-duration-format 'h:mm
org-footnote-auto-label 'plain
org-src-mode-hook '(org-src-babel-configure-edit-buffer org-src-mode-configure-edit-buffer
doom-modeline-set-org-src-modeline)
org-fontify-whole-heading-line t
org-link-shell-confirm-function 'yes-or-no-p
org-mode-local-vars-hook '(eldoc-mode)
org-babel-after-execute-hook '(org-redisplay-inline-images)
org-insert-heading-respect-content t
org-after-refile-insert-hook '(save-buffer)
org-metadown-hook '(org-babel-pop-to-session-maybe)
org-clock-out-hook '(org-clock-remove-empty-clock-drawer)
org-refile-targets '((nil :maxlevel . 3) (org-agenda-files :maxlevel . 4))
org-html-format-inlinetask-function 'org-html-format-inlinetask-default-function
org-enforce-todo-dependencies t
org-time-stamp-rounding-minutes '(0 1)
org-odt-format-headline-function 'org-odt-format-headline-default-function
org-special-ctrl-a/e t
org-imenu-depth 8
org-agenda-files '("~/orgnotes/transfer/transfer.org" "~/orgnotes/casenotes.org")
org-ascii-format-inlinetask-function 'org-ascii-format-inlinetask-default
org-reveal-start-hook '(org-decrypt-entry)
org-export-with-section-numbers nil
org-modules '(ol-bibtex)
org-startup-folded t
org-blocker-hook '(org-block-todo-from-children-or-siblings-or-parent)
org-mode-hook '(er/add-org-mode-expansions my/org-mode-hook org-clock-load
+lookup--init-org-mode-handlers-h
(closure (t) (&rest _)
(add-hook (quote before-save-hook) (quote org-encrypt-entries) nil t))
#[0 "\300\301\302\303\304$\207"
[add-hook change-major-mode-hook org-show-all append local] 5]
#[0 "\300\301\302\303\304$\207"
[add-hook change-major-mode-hook org-babel-show-result-all append local]
5]
org-babel-result-hide-spec org-babel-hide-all-hashes
#[0 "\301\211 \207" [imenu-create-index-function org-imenu-get-tree] 2]
doom-disable-show-paren-mode-h doom-disable-show-trailing-whitespace-h
+org-enable-auto-reformat-tables-h +org-enable-auto-update-cookies-h
+org-make-last-point-visible-h evil-org-mode toc-org-enable
embrace-org-mode-hook org-eldoc-load +literate-enable-recompile-h)
org-clock-persist 'history
org-export-with-smart-quotes t
org-odt-format-drawer-function #[514 "\207" [] 3 "\n\n(fn NAME CONTENTS)"]
org-outline-path-complete-in-steps nil
org-archive-hook '(org-attach-archive-delete-maybe)
org-agenda-finalize-hook '(+org-exclude-agenda-buffers-from-workspace-h
+org-defer-mode-in-agenda-buffers-h)
org-startup-indented t
org-reverse-note-order t
org-agenda-before-write-hook '(org-agenda-add-entry-text)
org-metaup-hook '(org-babel-load-in-session-maybe)
org-bibtex-headline-format-function #[257 "\300 \236A\207" [:title] 3 "\n\n(fn ENTRY)"]
org-latex-format-drawer-function #[514 "\207" [] 3 "\n\n(fn _ CONTENTS)"]
org-agenda-deadline-faces '((1.001 . error) (1.0 . org-warning)
(0.5 . org-upcoming-deadline)
(0.0 . org-upcoming-distant-deadline))
org-crypt-key nil
org-babel-pre-tangle-hook '(save-buffer)
org-tab-first-hook '(+org-yas-expand-maybe-h +org-indent-maybe-h
org-babel-hide-result-toggle-maybe org-babel-header-arg-expand
+org-cycle-only-current-subtree-h +org-clear-babel-results-h)
org-hide-leading-stars t
org-export-initial-scope 'subtree
org-load-hook '(+org-init-org-directory-h +org-init-appearance-h +org-init-agenda-h
+org-init-attachments-h +org-init-babel-h +org-init-babel-lazy-loader-h
+org-init-capture-defaults-h +org-init-capture-frame-h
+org-init-custom-links-h +org-init-export-h +org-init-habit-h
+org-init-hacks-h +org-init-keybinds-h +org-init-popup-rules-h
+org-init-protocol-h +org-init-protocol-lazy-loader-h
+org-init-smartparens-h)
org-link-abbrev-alist '(("doom-repo" . "https://github.com/hlissner/doom-emacs/%s")
("wolfram" . "https://wolframalpha.com/input/?i=%s")
("wikipedia" . "https://en.wikipedia.org/wiki/%s")
("duckduckgo" . "https://duckduckgo.com/?q=%s")
("gmap" . "https://maps.google.com/maps?q=%s")
("gimages" . "https://google.com/images?q=%s")
("google" . "https://google.com/search?q=")
("youtube" . "https://youtube.com/watch?v=%s")
("github" . "https://github.com/%s"))
org-export-backends '(md ascii html icalendar latex odt)
org-clock-in-resume t
org-ascii-format-drawer-function #[771 " \207" [] 4 "\n\n(fn NAME CONTENTS WIDTH)"]
org-attach-store-link-p t
org-list-demote-modify-bullet '(("+" . "-") ("-" . "+") ("*" . "+") ("1." . "a."))
org-archive-subtree-save-file-p t
org-agenda-span 'day
org-agenda-loop-over-headlines-in-active-region nil
org-src-lang-modes '(("redis" . redis) ("php" . php) ("arduino" . arduino)
("md" . markdown) ("C" . c) ("C++" . c++) ("asymptote" . asy)
("bash" . sh) ("beamer" . latex) ("calc" . fundamental) ("cpp" . c++)
("ditaa" . artist) ("dot" . fundamental) ("elisp" . emacs-lisp)
("ocaml" . tuareg) ("screen" . shell-script) ("shell" . sh)
("sqlite" . sql))
org-src-preserve-indentation t
org-fontify-quote-and-verse-blocks t
org-catch-invisible-edits 'error
org-occur-hook '(org-first-headline-recenter)
org-agenda-mode-hook '(+org-habit-resize-graph-h evil-org-agenda-mode)
org-agenda-window-setup 'current-window
org-indirect-buffer-display 'current-window
org-cycle-hook '(org-cycle-hide-archived-subtrees org-cycle-hide-drawers
org-cycle-show-empty-lines org-optimize-window-after-visibility-change)
org-todo-keywords '((sequence "TODO(t)" "PROJ(p)" "STRT(s)" "WAIT(w)" "HOLD(h)" "|"
"DONE(d)" "KILL(k)")
(sequence "[ ](T)" "[-](S)" "[?](W)" "|" "[X](D)"))
org-speed-command-hook '(org-speed-command-activate org-babel-speed-command-activate)
org-tags-column 0
org-capture-mode-hook '(+org-show-target-in-capture-header-h evil-insert-state)
org-clock-persist-file "/home/eddie/.emacs.d/.local/etc/org-clock-save.el"
org-attach-id-dir "/home/eddie/orgnotes/.attach/"
org-M-RET-may-split-line nil
org-odt-format-inlinetask-function 'org-odt-format-inlinetask-default-function
org-latex-prefer-user-labels t
org-export-preserve-breaks t
org-publish-timestamp-directory "/home/eddie/.emacs.d/.local/cache/org-timestamps/"
org-display-remote-inline-images 'download
org-refile-use-outline-path 'file
org-clock-display-default-range 'untilnow
org-export-with-author nil
org-priority-faces '((65 . error) (66 . warning) (67 . success))
org-export-before-parsing-hook '(org-attach-expand-links)
org-font-lock-set-keywords-hook '(doom-themes-enable-org-fontification)
org-id-locations-file "/home/eddie/orgnotes/.orgids"
org-confirm-shell-link-function 'yes-or-no-p
org-link-parameters '(("id" :follow org-id-open)
("bibtex" :follow org-bibtex-open :store org-bibtex-store-link)
("orgit-rev" :store orgit-rev-store :follow orgit-rev-open :export
orgit-rev-export :complete orgit-rev-complete-link)
("orgit-log" :store orgit-log-store :follow orgit-log-open :export
orgit-log-export :complete orgit-log-complete-link)
("orgit" :store orgit-status-store :follow orgit-status-open :export
orgit-status-export :complete orgit-status-complete-link)
("yt" :follow org-yt-follow :image-data-fun org-yt-image-data-fun)
("img" :image-data-fun +org-inline-image-data-fn)
("doom-modules" :complete
(closure
((dir-fn closure
((plist) (dir-var . doom-modules-dir) (key . "doom-modules") t)
nil (symbol-value dir-var))
(requires) (plist) (dir-var . doom-modules-dir)
(key . "doom-modules") t)
nil (if requires (mapc (function require) (doom-enlist requires)))
(+org--relative-path (+org--read-link-path key (funcall dir-fn))
(funcall dir-fn))
)
:follow
(closure
((dir-fn closure
((plist) (dir-var . doom-modules-dir) (key . "doom-modules") t)
nil (symbol-value dir-var))
(requires) (plist) (dir-var . doom-modules-dir)
(key . "doom-modules") t)
(link)
(org-link-open-as-file (expand-file-name link (funcall dir-fn)) nil)
)
:face
(closure
((dir-fn closure
((plist) (dir-var . doom-modules-dir) (key . "doom-modules") t)
nil (symbol-value dir-var))
(requires) (plist) (dir-var . doom-modules-dir)
(key . "doom-modules") t)
(link)
(let*
((path (expand-file-name link (funcall dir-fn)))
(option-index (string-match-p "::\$.*\$\\'" path))
(file-name (substring path 0 option-index)))
(if (file-exists-p file-name) (quote org-link) (quote error)))
)
)
("doom-docs" :complete
(closure
((dir-fn closure
((plist) (dir-var . doom-docs-dir) (key . "doom-docs") t) nil
(symbol-value dir-var))
(requires) (plist) (dir-var . doom-docs-dir) (key . "doom-docs") t)
nil (if requires (mapc (function require) (doom-enlist requires)))
(+org--relative-path (+org--read-link-path key (funcall dir-fn))
(funcall dir-fn))
)
:follow
(closure
((dir-fn closure
((plist) (dir-var . doom-docs-dir) (key . "doom-docs") t) nil
(symbol-value dir-var))
(requires) (plist) (dir-var . doom-docs-dir) (key . "doom-docs") t)
(link)
(org-link-open-as-file (expand-file-name link (funcall dir-fn)) nil)
)
:face
(closure
((dir-fn closure
((plist) (dir-var . doom-docs-dir) (key . "doom-docs") t) nil
(symbol-value dir-var))
(requires) (plist) (dir-var . doom-docs-dir) (key . "doom-docs") t)
(link)
(let*
((path (expand-file-name link (funcall dir-fn)))
(option-index (string-match-p "::\$.*\$\\'" path))
(file-name (substring path 0 option-index)))
(if (file-exists-p file-name) (quote org-link) (quote error)))
)
)
("doom" :complete
(closure
((dir-fn closure
((plist) (dir-var . doom-emacs-dir) (key . "doom") t) nil
(symbol-value dir-var))
(requires) (plist) (dir-var . doom-emacs-dir) (key . "doom") t)
nil (if requires (mapc (function require) (doom-enlist requires)))
(+org--relative-path (+org--read-link-path key (funcall dir-fn))
(funcall dir-fn))
)
:follow
(closure
((dir-fn closure
((plist) (dir-var . doom-emacs-dir) (key . "doom") t) nil
(symbol-value dir-var))
(requires) (plist) (dir-var . doom-emacs-dir) (key . "doom") t)
(link)
(org-link-open-as-file (expand-file-name link (funcall dir-fn)) nil)
)
:face
(closure
((dir-fn closure
((plist) (dir-var . doom-emacs-dir) (key . "doom") t) nil
(symbol-value dir-var))
(requires) (plist) (dir-var . doom-emacs-dir) (key . "doom") t)
(link)
(let*
((path (expand-file-name link (funcall dir-fn)))
(option-index (string-match-p "::\$.*\$\\'" path))
(file-name (substring path 0 option-index)))
(if (file-exists-p file-name) (quote org-link) (quote error)))
)
)
("org" :complete
(closure
((dir-fn closure
((plist) (dir-var . org-directory) (key . "org") t) nil
(symbol-value dir-var))
(requires) (plist) (dir-var . org-directory) (key . "org") t)
nil (if requires (mapc (function require) (doom-enlist requires)))
(+org--relative-path (+org--read-link-path key (funcall dir-fn))
(funcall dir-fn))
)
:follow
(closure
((dir-fn closure
((plist) (dir-var . org-directory) (key . "org") t) nil
(symbol-value dir-var))
(requires) (plist) (dir-var . org-directory) (key . "org") t)
(link)
(org-link-open-as-file (expand-file-name link (funcall dir-fn)) nil)
)
:face
(closure
((dir-fn closure
((plist) (dir-var . org-directory) (key . "org") t) nil
(symbol-value dir-var))
(requires) (plist) (dir-var . org-directory) (key . "org") t)
(link)
(let*
((path (expand-file-name link (funcall dir-fn)))
(option-index (string-match-p "::\$.*\$\\'" path))
(file-name (substring path 0 option-index)))
(if (file-exists-p file-name) (quote org-link) (quote error)))
)
)
("attachment" :image-data-fun +org-inline-image-data-fn :follow
org-attach-follow :complete org-attach-complete-link)
("file+sys") ("file+emacs") ("shell" :follow org-link--open-shell)
("news" :follow
#[514 "\301\300\302 Q \"\207" ["news" browse-url ":"] 6
"\n\n(fn URL ARG)"]
)
("mailto" :follow
#[514 "\301\300\302 Q \"\207" ["mailto" browse-url ":"] 6
"\n\n(fn URL ARG)"]
)
("https" :follow
#[514 "\301\300\302 Q \"\207" ["https" browse-url ":"] 6
"\n\n(fn URL ARG)"]
:image-data-fun +org-http-image-data-fn)
("http" :follow
#[514 "\301\300\302 Q \"\207" ["http" browse-url ":"] 6
"\n\n(fn URL ARG)"]
:image-data-fun +org-http-image-data-fn)
("ftp" :follow
#[514 "\301\300\302 Q \"\207" ["ftp" browse-url ":"] 6
"\n\n(fn URL ARG)"]
)
("help" :follow org-link--open-help)
("file" :complete org-link-complete-file :face
(closure (t) (path)
(if
(or (file-remote-p path)
(and IS-WINDOWS (string-prefix-p "\\\\" path))
(file-exists-p path))
(quote org-link) (quote error))
)
)
("elisp" :follow org-link--open-elisp)
("doi" :follow org-link--open-doi))
org-export-exclude-tags '("noexport" "DNA" "travel")
org-latex-format-headline-function 'org-latex-format-headline-default-function
org-link-translation-function 'toc-org-unhrefify
org-link-elisp-confirm-function nil
org-todo-keyword-faces '(("[-]" . +org-todo-active) ("STRT" . +org-todo-active)
("[?]" . +org-todo-onhold) ("WAIT" . +org-todo-onhold)
("HOLD" . +org-todo-onhold) ("PROJ" . +org-todo-project))
org-capture-after-finalize-hook '(+org-capture-cleanup-frame-h)
org-latex-format-inlinetask-function 'org-latex-format-inlinetask-default-function
org-html-format-drawer-function #[514 "\207" [] 3 "\n\n(fn NAME CONTENTS)"]
org-export-with-tags nil
org-image-actual-width nil
org-export-with-toc nil
org-eldoc-breadcrumb-separator " → "
org-show-context-detail t
org-html-format-headline-function 'org-html-format-headline-default-function
org-clock-mode-line-total 'today
org-entities-user '(("flat" "\\flat" nil "" "" "266D" "♭")
("sharp" "\\sharp" nil "" "" "266F" "♯"))
org-src-window-setup 'other-window
org-confirm-babel-evaluate nil
org-use-sub-superscripts '{}
org-agenda-custom-commands '(("p" "Priority=\"A\"" tags "PRIORITY=\"A\"" nil)
("@" "@In Progress without scheduled date" tags
"SCHEDULED=\"\"+LEVEL=3" nil)
("t" "All items with time logged, but no tag"
((tags "TAGS=\"\""
((org-agenda-skip-function
(lambda nil
(if
(and (null (org-get-tags))
(>= (my/org-clock-sum-current-item-excluding-children)
1)
)
nil (or (outline-next-heading) (point-max)))
)
)
)
)
)
)
)
org-directory "~/orgnotes/"
org-preview-latex-image-directory "/home/eddie/.emacs.d/.local/cache/org-latex/"
org-refile-use-cache t
org-tags-exclude-from-inheritance '("billable" "folder")
org-html-validation-link nil
org-attach-use-inheritance t
org-agenda-inhibit-startup t
org-agenda-start-on-weekday nil
org-default-notes-file "/home/eddie/orgnotes/notes.org"
org-id-locations-file-relative t
org-list-allow-alphabetical t
org-agenda-skip-unavailable-files t
)